RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 H0YGN5 161 aa20.69■□□□□ 0.9
SHKBP1-215ENST00000597649 FGFR2P21802 821 aa20.69■□□□□ 0.9
SHKBP1-215ENST00000597649 INPP5BP32019 993 aa20.69■□□□□ 0.9
SHKBP1-215ENST00000597649 C17orf99Q6UX52 265 aa20.69■□□□□ 0.9
SHKBP1-215ENST00000597649 MOGSQ13724 837 aa20.67■□□□□ 0.9
SHKBP1-215ENST00000597649 KIF22Q14807 665 aa20.67■□□□□ 0.9
SHKBP1-215ENST00000597649 MTFR1Q15390 333 aa20.67■□□□□ 0.9
SHKBP1-215ENST00000597649 HHIPL2Q6UWX4 724 aa20.67■□□□□ 0.9
SHKBP1-215ENST00000597649 MRPL50Q8N5N7 158 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-215ENST00000597649 TMOD2Q9NZR1 351 aa20.67■□□□□ 0.9
SHKBP1-215ENST00000597649 CPA4Q9UI42 421 aa20.67■□□□□ 0.9
SHKBP1-215ENST00000597649 SUGT1Q9Y2Z0 365 aa20.67■□□□□ 0.9
SHKBP1-215ENST00000597649 WDHD1O75717 1129 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-215ENST00000597649 PPATQ06203 517 aa20.66■□□□□ 0.9
SHKBP1-215ENST00000597649 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-215ENST00000597649 TRIM47Q96LD4 638 aa20.66■□□□□ 0.9
SHKBP1-215ENST00000597649 ZNF341Q9BYN7 854 aa20.66■□□□□ 0.9
SHKBP1-215ENST00000597649 ZNF112Q9UJU3 913 aa20.66■□□□□ 0.9
SHKBP1-215ENST00000597649 GNRH1P01148 92 aa20.65■□□□□ 0.9
SHKBP1-215ENST00000597649 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
SHKBP1-215ENST00000597649 FAM151AQ8WW52 585 aa20.65■□□□□ 0.9
SHKBP1-215ENST00000597649 SHISA4Q96DD7 197 aa20.65■□□□□ 0.9
SHKBP1-215ENST00000597649 HOOK2Q96ED9 719 aa20.65■□□□□ 0.9
SHKBP1-215ENST00000597649 USP44Q9H0E7 712 aa20.65■□□□□ 0.9
SHKBP1-215ENST00000597649 ADGRA2Q96PE1 1338 aa20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 PDHXO00330 501 aa20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 PSMC4P43686 418 aa20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 RFX5P48382 616 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 NFIAQ12857 509 aa20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 PUM3Q15397 648 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 ANKRD23Q86SG2 305 aa20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 SRRDQ9UH36 339 aa20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 KCNH4Q9UQ05 1017 aa20.64■□□□□ 0.89
SHKBP1-215ENST00000597649 RPAP1Q9BWH6 1393 aaPredicted RBP20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 MAST3O60307 1309 aa20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 KIF16BQ96L93 1317 aa20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 IFIT1P09914 478 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 OSBPP22059 807 aa20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 PRMT2P55345 433 aa20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 TCP10Q12799 353 aa20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 CDC42EP5Q6NZY7 148 aa20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 DAGLAQ9Y4D2 1042 aa20.63■□□□□ 0.89
SHKBP1-215ENST00000597649 DIXDC1Q155Q3 683 aa20.62■□□□□ 0.89
SHKBP1-215ENST00000597649 ZFPM1Q8IX07 1006 aa20.62■□□□□ 0.89
SHKBP1-215ENST00000597649 FAM198AQ9UFP1 575 aa20.62■□□□□ 0.89
SHKBP1-215ENST00000597649 EYA2O00167 538 aa20.61■□□□□ 0.89
SHKBP1-215ENST00000597649 ATG9AQ7Z3C6 839 aa20.61■□□□□ 0.89
SHKBP1-215ENST00000597649 WDR66Q8TBY9 1149 aa20.61■□□□□ 0.89
SHKBP1-215ENST00000597649 ZNF521Q96K83 1311 aa20.6■□□□□ 0.89
SHKBP1-215ENST00000597649 FMNL1O95466 1100 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-215ENST00000597649 GPAT2Q6NUI2 795 aa20.6■□□□□ 0.89
SHKBP1-215ENST00000597649 UBE2Q1Q7Z7E8 422 aa20.6■□□□□ 0.89
SHKBP1-215ENST00000597649 LPIN2Q92539 896 aa20.6■□□□□ 0.89
SHKBP1-215ENST00000597649 A0A0C4DFX4 3053 aa20.6■□□□□ 0.89
SHKBP1-215ENST00000597649 PRDX5P30044 214 aa20.59■□□□□ 0.89
SHKBP1-215ENST00000597649 GRK4P32298 578 aa20.59■□□□□ 0.89
SHKBP1-215ENST00000597649 NOL9Q5SY16 702 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-215ENST00000597649 CHRDL2Q6WN34 429 aa20.59■□□□□ 0.89
SHKBP1-215ENST00000597649 LAMA3Q16787 3333 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 CYP2C8P10632 490 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 BCRP11274 1271 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 CCL5P13501 91 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 SLC5A1P13866 664 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 RAET1EQ8TD07 263 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 SSH1Q8WYL5 1049 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 DPF3Q92784 378 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 USP40Q9NVE5 1235 aa20.58■□□□□ 0.89
SHKBP1-215ENST00000597649 HOXD10P28358 340 aa20.57■□□□□ 0.88
SHKBP1-215ENST00000597649 GJA8P48165 433 aa20.57■□□□□ 0.88
SHKBP1-215ENST00000597649 RBM27Q9P2N5 1060 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-215ENST00000597649 PTPRCP08575 1304 aa20.56■□□□□ 0.88
SHKBP1-215ENST00000597649 MYPNQ86TC9 1320 aa20.56■□□□□ 0.88
SHKBP1-215ENST00000597649 PHF20L1A8MW92 1017 aa20.56■□□□□ 0.88
SHKBP1-215ENST00000597649 GJB1P08034 283 aa20.56■□□□□ 0.88
SHKBP1-215ENST00000597649 SLURP2P0DP57 97 aa20.56■□□□□ 0.88
SHKBP1-215ENST00000597649 PRKCZQ05513 592 aa20.56■□□□□ 0.88
SHKBP1-215ENST00000597649 GABRQQ9UN88 632 aa20.56■□□□□ 0.88
SHKBP1-215ENST00000597649 ATRNL1Q5VV63 1379 aa20.56■□□□□ 0.88
SHKBP1-215ENST00000597649 CXCL11O14625 94 aa20.55■□□□□ 0.88
SHKBP1-215ENST00000597649 SH3BP5LQ7L8J4 393 aa20.55■□□□□ 0.88
SHKBP1-215ENST00000597649 RNF208Q9H0X6 261 aa20.55■□□□□ 0.88
SHKBP1-215ENST00000597649 LDHBP07195 334 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-215ENST00000597649 NKX2-3Q8TAU0 364 aa20.54■□□□□ 0.88
SHKBP1-215ENST00000597649 PRO3102Q9H379 93 aa20.54■□□□□ 0.88
SHKBP1-215ENST00000597649 PHKA1P46020 1223 aa20.53■□□□□ 0.88
SHKBP1-215ENST00000597649 PARK7Q99497 189 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-215ENST00000597649 SIL1Q9H173 461 aa20.53■□□□□ 0.88
SHKBP1-215ENST00000597649 UNC93B1Q9H1C4 597 aa20.53■□□□□ 0.88
SHKBP1-215ENST00000597649 BIN2Q9UBW5 565 aaPredicted RBP20.53■□□□□ 0.88
SHKBP1-215ENST00000597649 ZHX2Q9Y6X8 837 aa20.53■□□□□ 0.88
SHKBP1-215ENST00000597649 COL6A3P12111 3177 aa20.52■□□□□ 0.88
SHKBP1-215ENST00000597649 A0A0G2JLL6 359 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-215ENST00000597649 PTPRAP18433 802 aa20.52■□□□□ 0.88
SHKBP1-215ENST00000597649 RGS3P49796 1198 aa20.52■□□□□ 0.88
SHKBP1-215ENST00000597649 FCGRTP55899 365 aa20.52■□□□□ 0.88
SHKBP1-215ENST00000597649 ATP2B3Q16720 1220 aa20.52■□□□□ 0.88
SHKBP1-215ENST00000597649 PRRT2Q7Z6L0 340 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-215ENST00000597649 AFG3L2Q9Y4W6 797 aa20.52■□□□□ 0.88
SHKBP1-215ENST00000597649 SALL1Q9NSC2 1324 aa20.52■□□□□ 0.87
SHKBP1-215ENST00000597649 MAP3K10Q02779 954 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms