RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 SSH3Q8TE77 659 aa10.33□□□□□ -0.76
LINC00347-204ENST00000596240 ZNF277Q9NRM2 450 aaPredicted RBP10.33□□□□□ -0.76
LINC00347-204ENST00000596240 SCN9AQ15858 1988 aa10.33□□□□□ -0.76
LINC00347-204ENST00000596240 SRGAP3O43295 1099 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 DDNO94850 711 aaPredicted RBP10.32□□□□□ -0.76
LINC00347-204ENST00000596240 IGKV5-2P06315 115 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 VEGFAP15692 232 aaPredicted RBP10.32□□□□□ -0.76
LINC00347-204ENST00000596240 MTX1Q13505 466 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 PARP10Q53GL7 1025 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 HSP90AB3PQ58FF7 597 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 PRPF38BQ5VTL8 546 aaKnown RBP10.32□□□□□ -0.76
LINC00347-204ENST00000596240 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 NLRP10Q86W26 655 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 C16orf71Q8IYS4 520 aaPredicted RBP10.32□□□□□ -0.76
LINC00347-204ENST00000596240 SYNE4Q8N205 404 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 SMC1BQ8NDV3 1235 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 THSD7BQ9C0I4 1608 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 TRPM7Q96QT4 1865 aa10.32□□□□□ -0.76
LINC00347-204ENST00000596240 PNMA6EA0A0J9YXQ4 647 aa10.31□□□□□ -0.76
LINC00347-204ENST00000596240 EIF5BO60841 1220 aaKnown RBP10.31□□□□□ -0.76
LINC00347-204ENST00000596240 CCDC191Q8NCU4 936 aa10.31□□□□□ -0.76
LINC00347-204ENST00000596240 PSMD1Q99460 953 aa10.31□□□□□ -0.76
LINC00347-204ENST00000596240 LRRCC1Q9C099 1032 aa10.31□□□□□ -0.76
LINC00347-204ENST00000596240 CWC25Q9NXE8 425 aaPredicted RBP10.31□□□□□ -0.76
LINC00347-204ENST00000596240 SPDYE5A6NIY4 337 aa10.3□□□□□ -0.76
LINC00347-204ENST00000596240 FZD9O00144 591 aa10.3□□□□□ -0.76
LINC00347-204ENST00000596240 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
LINC00347-204ENST00000596240 GTF2E1P29083 439 aaPredicted RBP10.3□□□□□ -0.76
LINC00347-204ENST00000596240 ANP32AP39687 249 aaKnown RBP10.3□□□□□ -0.76
LINC00347-204ENST00000596240 IARSP41252 1262 aaKnown RBP10.3□□□□□ -0.76
LINC00347-204ENST00000596240 C8orf34Q49A92 452 aa10.3□□□□□ -0.76
LINC00347-204ENST00000596240 BMP2KLQ5H9B9 411 aa10.3□□□□□ -0.76
LINC00347-204ENST00000596240 SPRYD7Q5W111 196 aa10.3□□□□□ -0.76
LINC00347-204ENST00000596240 PTCRAQ6ISU1 281 aaPredicted RBP10.3□□□□□ -0.76
LINC00347-204ENST00000596240 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
LINC00347-204ENST00000596240 CRAMP1Q96RY5 1269 aa10.3□□□□□ -0.76
LINC00347-204ENST00000596240 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00347-204ENST00000596240 UPF2Q9HAU5 1272 aaKnown RBP10.3□□□□□ -0.76
LINC00347-204ENST00000596240 ATP5J2-PTCD1G3V325 749 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 APBB1O00213 710 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 HCLS1P14317 486 aaPredicted RBP10.29□□□□□ -0.76
LINC00347-204ENST00000596240 ALDH1B1P30837 517 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 OS9Q13438 667 aaPredicted RBP10.29□□□□□ -0.76
LINC00347-204ENST00000596240 TCIRG1Q13488 830 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 SLC10A5Q5PT55 438 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 TRIM67Q6ZTA4 783 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 ERC1Q8IUD2 1116 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 RTKN2Q8IZC4 609 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 KLRG1Q96E93 195 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 KIF1BPQ96EK5 621 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 SUCLG2Q96I99 432 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 NUDT12Q9BQG2 462 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 UTP14AQ9BVJ6 771 aaKnown RBP10.29□□□□□ -0.76
LINC00347-204ENST00000596240 EXOC6BQ9Y2D4 811 aa10.29□□□□□ -0.76
LINC00347-204ENST00000596240 TRIM28Q13263 835 aaKnown RBP10.28□□□□□ -0.76
LINC00347-204ENST00000596240 UBE3BQ7Z3V4 1068 aa10.28□□□□□ -0.76
LINC00347-204ENST00000596240 TSC1Q92574 1164 aa10.28□□□□□ -0.76
LINC00347-204ENST00000596240 ISCA1Q9BUE6 129 aa10.28□□□□□ -0.76
LINC00347-204ENST00000596240 BICC1Q9H694 974 aaKnown RBP10.28□□□□□ -0.76
LINC00347-204ENST00000596240 NOP58Q9Y2X3 529 aaKnown RBP10.28□□□□□ -0.76
LINC00347-204ENST00000596240 SH3TC1Q8TE82 1336 aa10.28□□□□□ -0.76
LINC00347-204ENST00000596240 PASKQ96RG2 1323 aa10.28□□□□□ -0.76
LINC00347-204ENST00000596240 H7C1W4 665 aa10.27□□□□□ -0.77
LINC00347-204ENST00000596240 G3BP1Q13283 466 aaKnown RBP eCLIP10.27□□□□□ -0.77
LINC00347-204ENST00000596240 ZNF697Q5TEC3 545 aa10.27□□□□□ -0.77
LINC00347-204ENST00000596240 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
LINC00347-204ENST00000596240 JMYQ8N9B5 988 aa10.27□□□□□ -0.77
LINC00347-204ENST00000596240 RBM17Q96I25 401 aaKnown RBP10.27□□□□□ -0.77
LINC00347-204ENST00000596240 TAF1DQ9H5J8 278 aaPredicted RBP10.27□□□□□ -0.77
LINC00347-204ENST00000596240 SCNN1DP51172 638 aa10.26□□□□□ -0.77
LINC00347-204ENST00000596240 PTPRNQ16849 979 aa10.26□□□□□ -0.77
LINC00347-204ENST00000596240 TTC22Q5TAA0 569 aa10.26□□□□□ -0.77
LINC00347-204ENST00000596240 CC2D2BQ6DHV5 1058 aa10.26□□□□□ -0.77
LINC00347-204ENST00000596240 DESI1Q6ICB0 168 aa10.26□□□□□ -0.77
LINC00347-204ENST00000596240 RHPN1Q8TCX5 695 aa10.26□□□□□ -0.77
LINC00347-204ENST00000596240 NLRP3Q96P20 1036 aa10.26□□□□□ -0.77
LINC00347-204ENST00000596240 TRMT112Q9UI30 125 aaKnown RBP10.26□□□□□ -0.77
LINC00347-204ENST00000596240 ATP6V0A2Q9Y487 856 aa10.26□□□□□ -0.77
LINC00347-204ENST00000596240 SMARCA5O60264 1052 aaPredicted RBP10.25□□□□□ -0.77
LINC00347-204ENST00000596240 PCCAP05165 728 aaPredicted RBP10.25□□□□□ -0.77
LINC00347-204ENST00000596240 CCNYL3P0C7X3 344 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 RPIAP49247 311 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 TRIM32Q13049 653 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 AOC3Q16853 763 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 RABL6Q3YEC7 729 aaPredicted RBP10.25□□□□□ -0.77
LINC00347-204ENST00000596240 CASC1Q6TDU7 716 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 LYPD8Q6UX82 237 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 ZNF598Q86UK7 904 aaKnown RBP10.25□□□□□ -0.77
LINC00347-204ENST00000596240 LDHDQ86WU2 507 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 GPC2Q8N158 579 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 CLASRPQ8N2M8 674 aaKnown RBP10.25□□□□□ -0.77
LINC00347-204ENST00000596240 GPATCH3Q96I76 525 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 RTFDC1Q9BY42 306 aaPredicted RBP10.25□□□□□ -0.77
LINC00347-204ENST00000596240 BCL11AQ9H165 835 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 OSBPL3Q9H4L5 887 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 AOX1Q06278 1338 aa10.25□□□□□ -0.77
LINC00347-204ENST00000596240 IQCA1LA6NCM1 817 aa10.24□□□□□ -0.77
LINC00347-204ENST00000596240 HSP90B1P14625 803 aaKnown RBP10.24□□□□□ -0.77
LINC00347-204ENST00000596240 MX1P20591 662 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms