RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 MYH13Q9UKX3 1938 aa19.83■□□□□ 0.77
USHBP1-205ENST00000595993 GNAI3P08754 354 aa19.83■□□□□ 0.77
USHBP1-205ENST00000595993 RFX5P48382 616 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-205ENST00000595993 BCAMP50895 628 aa19.83■□□□□ 0.77
USHBP1-205ENST00000595993 CACNB3P54284 484 aa19.83■□□□□ 0.77
USHBP1-205ENST00000595993 CHAF1AQ13111 956 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-205ENST00000595993 TAF1CQ15572 869 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-205ENST00000595993 KLHDC4Q8TBB5 520 aa19.83■□□□□ 0.77
USHBP1-205ENST00000595993 OTUD5Q96G74 571 aa19.83■□□□□ 0.77
USHBP1-205ENST00000595993 ZFYVE28Q9HCC9 887 aa19.83■□□□□ 0.77
USHBP1-205ENST00000595993 MAST3O60307 1309 aa19.82■□□□□ 0.76
USHBP1-205ENST00000595993 HHIPL2Q6UWX4 724 aa19.82■□□□□ 0.76
USHBP1-205ENST00000595993 ERO1BQ86YB8 467 aa19.82■□□□□ 0.76
USHBP1-205ENST00000595993 ITPRIPQ8IWB1 547 aa19.82■□□□□ 0.76
USHBP1-205ENST00000595993 ZSWIM8A7E2V4 1837 aa19.81■□□□□ 0.76
USHBP1-205ENST00000595993 ARHGEF6Q15052 776 aa19.81■□□□□ 0.76
USHBP1-205ENST00000595993 PUM3Q15397 648 aaKnown RBP19.81■□□□□ 0.76
USHBP1-205ENST00000595993 HOOK2Q96ED9 719 aa19.81■□□□□ 0.76
USHBP1-205ENST00000595993 TLR2O60603 784 aa19.8■□□□□ 0.76
USHBP1-205ENST00000595993 FRAT2O75474 233 aaPredicted RBP19.8■□□□□ 0.76
USHBP1-205ENST00000595993 CETPP11597 493 aa19.8■□□□□ 0.76
USHBP1-205ENST00000595993 EN2P19622 333 aaPredicted RBP19.8■□□□□ 0.76
USHBP1-205ENST00000595993 PPIL2Q13356 520 aa19.8■□□□□ 0.76
USHBP1-205ENST00000595993 WRNIP1Q96S55 665 aa19.8■□□□□ 0.76
USHBP1-205ENST00000595993 PTCH2Q9Y6C5 1203 aa19.8■□□□□ 0.76
USHBP1-205ENST00000595993 IRF6O14896 467 aa19.79■□□□□ 0.76
USHBP1-205ENST00000595993 ZBTB7BO15156 539 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-205ENST00000595993 IFIT1P09914 478 aaKnown RBP19.79■□□□□ 0.76
USHBP1-205ENST00000595993 ZKSCAN4Q969J2 545 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-205ENST00000595993 TMOD2Q9NZR1 351 aa19.79■□□□□ 0.76
USHBP1-205ENST00000595993 BTBD19C9JJ37 291 aa19.78■□□□□ 0.76
USHBP1-205ENST00000595993 EYA2O00167 538 aa19.78■□□□□ 0.76
USHBP1-205ENST00000595993 ZBTB22O15209 634 aa19.78■□□□□ 0.76
USHBP1-205ENST00000595993 GNAI2P04899 355 aa19.78■□□□□ 0.76
USHBP1-205ENST00000595993 SNAPC2Q13487 334 aa19.78■□□□□ 0.76
USHBP1-205ENST00000595993 C20orf194Q5TEA3 1177 aa19.78■□□□□ 0.76
USHBP1-205ENST00000595993 ZNF112Q9UJU3 913 aa19.78■□□□□ 0.76
USHBP1-205ENST00000595993 HDAC5Q9UQL6 1122 aa19.78■□□□□ 0.76
USHBP1-205ENST00000595993 LACTBP83111 547 aaPredicted RBP19.77■□□□□ 0.76
USHBP1-205ENST00000595993 PPATQ06203 517 aa19.77■□□□□ 0.76
USHBP1-205ENST00000595993 SLC9C1Q4G0N8 1177 aa19.77■□□□□ 0.76
USHBP1-205ENST00000595993 HABP4Q5JVS0 413 aaKnown RBP19.77■□□□□ 0.76
USHBP1-205ENST00000595993 DCAF15Q66K64 600 aa19.77■□□□□ 0.76
USHBP1-205ENST00000595993 ATG9AQ7Z3C6 839 aa19.77■□□□□ 0.76
USHBP1-205ENST00000595993 WDR66Q8TBY9 1149 aa19.77■□□□□ 0.76
USHBP1-205ENST00000595993 FAM151AQ8WW52 585 aa19.77■□□□□ 0.76
USHBP1-205ENST00000595993 LPIN2Q92539 896 aa19.77■□□□□ 0.76
USHBP1-205ENST00000595993 C1orf115Q9H7X2 142 aa19.77■□□□□ 0.76
USHBP1-205ENST00000595993 GNRH1P01148 92 aa19.76■□□□□ 0.75
USHBP1-205ENST00000595993 MTX1Q13505 466 aa19.76■□□□□ 0.75
USHBP1-205ENST00000595993 NBPF11Q86T75 865 aa19.76■□□□□ 0.75
USHBP1-205ENST00000595993 ZNF341Q9BYN7 854 aa19.76■□□□□ 0.75
USHBP1-205ENST00000595993 COG6Q9Y2V7 657 aa19.76■□□□□ 0.75
USHBP1-205ENST00000595993 ADGRA2Q96PE1 1338 aa19.76■□□□□ 0.75
USHBP1-205ENST00000595993 WDHD1O75717 1129 aaPredicted RBP19.75■□□□□ 0.75
USHBP1-205ENST00000595993 MS4A1P11836 297 aa19.75■□□□□ 0.75
USHBP1-205ENST00000595993 MVPQ14764 893 aaKnown RBP19.75■□□□□ 0.75
USHBP1-205ENST00000595993 C17orf99Q6UX52 265 aa19.75■□□□□ 0.75
USHBP1-205ENST00000595993 TMEM106CQ9BVX2 250 aa19.75■□□□□ 0.75
USHBP1-205ENST00000595993 ARHGAP39Q9C0H5 1083 aa19.75■□□□□ 0.75
USHBP1-205ENST00000595993 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
USHBP1-205ENST00000595993 KCNH4Q9UQ05 1017 aa19.75■□□□□ 0.75
USHBP1-205ENST00000595993 PA2G4Q9UQ80 394 aaKnown RBP19.75■□□□□ 0.75
USHBP1-205ENST00000595993 DAGLAQ9Y4D2 1042 aa19.75■□□□□ 0.75
USHBP1-205ENST00000595993 PNMA6EA0A0J9YXQ4 647 aa19.74■□□□□ 0.75
USHBP1-205ENST00000595993 SRGAP3O43295 1099 aa19.74■□□□□ 0.75
USHBP1-205ENST00000595993 SLC5A1P13866 664 aa19.74■□□□□ 0.75
USHBP1-205ENST00000595993 INPP5BP32019 993 aa19.74■□□□□ 0.75
USHBP1-205ENST00000595993 PRMT2P55345 433 aa19.74■□□□□ 0.75
USHBP1-205ENST00000595993 MOGSQ13724 837 aa19.74■□□□□ 0.75
USHBP1-205ENST00000595993 SALL1Q9NSC2 1324 aa19.74■□□□□ 0.75
USHBP1-205ENST00000595993 ATRNL1Q5VV63 1379 aa19.73■□□□□ 0.75
USHBP1-205ENST00000595993 CIAO1O76071 339 aa19.73■□□□□ 0.75
USHBP1-205ENST00000595993 NOL9Q5SY16 702 aaKnown RBP19.73■□□□□ 0.75
USHBP1-205ENST00000595993 CDC42EP5Q6NZY7 148 aa19.73■□□□□ 0.75
USHBP1-205ENST00000595993 ANKRD23Q86SG2 305 aa19.73■□□□□ 0.75
USHBP1-205ENST00000595993 SIL1Q9H173 461 aa19.73■□□□□ 0.75
USHBP1-205ENST00000595993 CTGFP29279 349 aa19.72■□□□□ 0.75
USHBP1-205ENST00000595993 PRDX5P30044 214 aa19.72■□□□□ 0.75
USHBP1-205ENST00000595993 NFIAQ12857 509 aa19.72■□□□□ 0.75
USHBP1-205ENST00000595993 PDE3AQ14432 1141 aa19.72■□□□□ 0.75
USHBP1-205ENST00000595993 MIGA2Q7L4E1 593 aa19.72■□□□□ 0.75
USHBP1-205ENST00000595993 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.72■□□□□ 0.75
USHBP1-205ENST00000595993 COPRSQ9NQ92 184 aa19.72■□□□□ 0.75
USHBP1-205ENST00000595993 FAM198AQ9UFP1 575 aa19.72■□□□□ 0.75
USHBP1-205ENST00000595993 DOCK2Q92608 1830 aa19.72■□□□□ 0.75
USHBP1-205ENST00000595993 RFX7Q2KHR2 1363 aa19.71■□□□□ 0.75
USHBP1-205ENST00000595993 KIF22Q14807 665 aa19.71■□□□□ 0.75
USHBP1-205ENST00000595993 DIXDC1Q155Q3 683 aa19.71■□□□□ 0.75
USHBP1-205ENST00000595993 SEMA3EO15041 775 aa19.7■□□□□ 0.74
USHBP1-205ENST00000595993 RRP1P56182 461 aaKnown RBP19.7■□□□□ 0.74
USHBP1-205ENST00000595993 SH3TC2Q8TF17 1288 aa19.7■□□□□ 0.74
USHBP1-205ENST00000595993 DDX19BQ9UMR2 479 aa19.7■□□□□ 0.74
USHBP1-205ENST00000595993 ATP8B2P98198 1209 aa19.69■□□□□ 0.74
USHBP1-205ENST00000595993 POLA2Q14181 598 aa19.69■□□□□ 0.74
USHBP1-205ENST00000595993 ATP2B3Q16720 1220 aa19.69■□□□□ 0.74
USHBP1-205ENST00000595993 TRIM47Q96LD4 638 aa19.69■□□□□ 0.74
USHBP1-205ENST00000595993 PDHXO00330 501 aa19.68■□□□□ 0.74
USHBP1-205ENST00000595993 LDHBP07195 334 aaKnown RBP19.68■□□□□ 0.74
USHBP1-205ENST00000595993 MAP3K10Q02779 954 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms