RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 WRNIP1Q96S55 665 aa21.14■□□□□ 0.97
CCDC9-202ENST00000595659 NFIAQ12857 509 aa21.13■□□□□ 0.97
CCDC9-202ENST00000595659 FBXO46Q6PJ61 603 aaPredicted RBP21.13■□□□□ 0.97
CCDC9-202ENST00000595659 USP40Q9NVE5 1235 aa21.13■□□□□ 0.97
CCDC9-202ENST00000595659 TRIM17Q9Y577 477 aa21.13■□□□□ 0.97
CCDC9-202ENST00000595659 SNCAIPQ9Y6H5 919 aa21.13■□□□□ 0.97
CCDC9-202ENST00000595659 ARAP2Q8WZ64 1704 aa21.12■□□□□ 0.97
CCDC9-202ENST00000595659 CCL15-CCL14A0A0B4J2E2 113 aa21.12■□□□□ 0.97
CCDC9-202ENST00000595659 A0A1B0GUL7 405 aa21.12■□□□□ 0.97
CCDC9-202ENST00000595659 CCL15Q16663 113 aa21.12■□□□□ 0.97
CCDC9-202ENST00000595659 XAGE2Q96GT9 111 aa21.12■□□□□ 0.97
CCDC9-202ENST00000595659 NEUROD6Q96NK8 337 aa21.12■□□□□ 0.97
CCDC9-202ENST00000595659 GNAI2P04899 355 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 GTF2A2P52657 109 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 MTX1Q13505 466 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 RASGRF1Q13972 1273 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 ZFPM1Q8IX07 1006 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 TMEM57Q8N5G2 664 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 CD99L2Q8TCZ2 262 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 FAM151AQ8WW52 585 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 FAM198AQ9UFP1 575 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 ABCF2Q9UG63 623 aa21.11■□□□□ 0.97
CCDC9-202ENST00000595659 SALL1Q9NSC2 1324 aa21.1■□□□□ 0.97
CCDC9-202ENST00000595659 PNMA6EA0A0J9YXQ4 647 aa21.1■□□□□ 0.97
CCDC9-202ENST00000595659 SPDYE5A6NIY4 337 aa21.1■□□□□ 0.97
CCDC9-202ENST00000595659 SEMA3EO15041 775 aa21.1■□□□□ 0.97
CCDC9-202ENST00000595659 DCAF15Q66K64 600 aa21.1■□□□□ 0.97
CCDC9-202ENST00000595659 OTOP1Q7RTM1 612 aa21.1■□□□□ 0.97
CCDC9-202ENST00000595659 AKAP2Q9Y2D5 859 aa21.1■□□□□ 0.97
CCDC9-202ENST00000595659 INPP5BP32019 993 aa21.09■□□□□ 0.97
CCDC9-202ENST00000595659 DIEXFQ68CQ4 756 aaKnown RBP21.09■□□□□ 0.97
CCDC9-202ENST00000595659 FAM43AQ8N2R8 423 aa21.09■□□□□ 0.97
CCDC9-202ENST00000595659 HOOK2Q96ED9 719 aa21.09■□□□□ 0.97
CCDC9-202ENST00000595659 ZNF341Q9BYN7 854 aa21.09■□□□□ 0.97
CCDC9-202ENST00000595659 IRF6O14896 467 aa21.08■□□□□ 0.97
CCDC9-202ENST00000595659 CAP1Q01518 475 aa21.08■□□□□ 0.97
CCDC9-202ENST00000595659 ZKSCAN2Q63HK3 967 aa21.08■□□□□ 0.97
CCDC9-202ENST00000595659 ERO1BQ86YB8 467 aa21.08■□□□□ 0.97
CCDC9-202ENST00000595659 DZIP1Q86YF9 867 aaKnown RBP21.08■□□□□ 0.97
CCDC9-202ENST00000595659 SP3Q02447 781 aa21.07■□□□□ 0.96
CCDC9-202ENST00000595659 MVPQ14764 893 aaKnown RBP21.07■□□□□ 0.96
CCDC9-202ENST00000595659 TAF1CQ15572 869 aaPredicted RBP21.07■□□□□ 0.96
CCDC9-202ENST00000595659 ZGPATQ8N5A5 531 aaKnown RBP21.07■□□□□ 0.96
CCDC9-202ENST00000595659 ERO1AQ96HE7 468 aa21.07■□□□□ 0.96
CCDC9-202ENST00000595659 G3BP1Q13283 466 aaKnown RBP eCLIP21.06■□□□□ 0.96
CCDC9-202ENST00000595659 GORABQ5T7V8 394 aa21.06■□□□□ 0.96
CCDC9-202ENST00000595659 PI16Q6UXB8 463 aa21.06■□□□□ 0.96
CCDC9-202ENST00000595659 C1orf115Q9H7X2 142 aa21.06■□□□□ 0.96
CCDC9-202ENST00000595659 ZFYVE28Q9HCC9 887 aa21.06■□□□□ 0.96
CCDC9-202ENST00000595659 RPAP1Q9BWH6 1393 aaPredicted RBP21.06■□□□□ 0.96
CCDC9-202ENST00000595659 BTBD19C9JJ37 291 aa21.05■□□□□ 0.96
CCDC9-202ENST00000595659 CETPP11597 493 aa21.05■□□□□ 0.96
CCDC9-202ENST00000595659 RGS3P49796 1198 aa21.05■□□□□ 0.96
CCDC9-202ENST00000595659 TBC1D9Q6ZT07 1266 aa21.05■□□□□ 0.96
CCDC9-202ENST00000595659 EFCC1Q9HA90 598 aa21.05■□□□□ 0.96
CCDC9-202ENST00000595659 OTOFQ9HC10 1997 aa21.05■□□□□ 0.96
CCDC9-202ENST00000595659 SLURP2P0DP57 97 aa21.04■□□□□ 0.96
CCDC9-202ENST00000595659 BTDP43251 543 aa21.04■□□□□ 0.96
CCDC9-202ENST00000595659 PPIL2Q13356 520 aa21.04■□□□□ 0.96
CCDC9-202ENST00000595659 SNAPC2Q13487 334 aa21.04■□□□□ 0.96
CCDC9-202ENST00000595659 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
CCDC9-202ENST00000595659 HMG20BQ9P0W2 317 aa21.04■□□□□ 0.96
CCDC9-202ENST00000595659 GAKO14976 1311 aa21.04■□□□□ 0.96
CCDC9-202ENST00000595659 ECM2O94769 699 aaPredicted RBP21.03■□□□□ 0.96
CCDC9-202ENST00000595659 MECOMQ03112 1051 aa21.03■□□□□ 0.96
CCDC9-202ENST00000595659 PICALMQ13492 652 aa21.03■□□□□ 0.96
CCDC9-202ENST00000595659 SPTY2D1Q68D10 685 aaPredicted RBP21.03■□□□□ 0.96
CCDC9-202ENST00000595659 ERICH6Q7L0X2 663 aa21.03■□□□□ 0.96
CCDC9-202ENST00000595659 ZSCAN29Q8IWY8 852 aaPredicted RBP21.03■□□□□ 0.96
CCDC9-202ENST00000595659 ZNF112Q9UJU3 913 aa21.03■□□□□ 0.96
CCDC9-202ENST00000595659 PTPN22Q9Y2R2 807 aa21.03■□□□□ 0.96
CCDC9-202ENST00000595659 PPATQ06203 517 aa21.02■□□□□ 0.96
CCDC9-202ENST00000595659 SH3BP5LQ7L8J4 393 aa21.02■□□□□ 0.96
CCDC9-202ENST00000595659 SPATA5Q8NB90 893 aa21.02■□□□□ 0.96
CCDC9-202ENST00000595659 DDX4Q9NQI0 724 aaKnown RBP21.02■□□□□ 0.96
CCDC9-202ENST00000595659 PDS5AQ29RF7 1337 aaKnown RBP21.02■□□□□ 0.95
CCDC9-202ENST00000595659 ZBTB22O15209 634 aa21.01■□□□□ 0.95
CCDC9-202ENST00000595659 WDHD1O75717 1129 aaPredicted RBP21.01■□□□□ 0.95
CCDC9-202ENST00000595659 RLBP1P12271 317 aa21.01■□□□□ 0.95
CCDC9-202ENST00000595659 ITPRIPQ8IWB1 547 aa21.01■□□□□ 0.95
CCDC9-202ENST00000595659 SLF2Q8IX21 1173 aa21.01■□□□□ 0.95
CCDC9-202ENST00000595659 FTSJ3Q8IY81 847 aaKnown RBP21.01■□□□□ 0.95
CCDC9-202ENST00000595659 ZNF384Q8TF68 577 aa21.01■□□□□ 0.95
CCDC9-202ENST00000595659 FAM163AQ96GL9 167 aaPredicted RBP21.01■□□□□ 0.95
CCDC9-202ENST00000595659 IDI2Q9BXS1 227 aa21.01■□□□□ 0.95
CCDC9-202ENST00000595659 MROH7-TTC4A0A0A0MT08 1334 aa21.01■□□□□ 0.95
CCDC9-202ENST00000595659 DDTLA6NHG4 134 aaPredicted RBP21■□□□□ 0.95
CCDC9-202ENST00000595659 ENTPD3O75355 529 aa21■□□□□ 0.95
CCDC9-202ENST00000595659 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
CCDC9-202ENST00000595659 RAI14Q9P0K7 980 aa21■□□□□ 0.95
CCDC9-202ENST00000595659 MCAMP43121 646 aa20.99■□□□□ 0.95
CCDC9-202ENST00000595659 ATP8B2P98198 1209 aa20.99■□□□□ 0.95
CCDC9-202ENST00000595659 POLA2Q14181 598 aa20.99■□□□□ 0.95
CCDC9-202ENST00000595659 ARHGAP39Q9C0H5 1083 aa20.99■□□□□ 0.95
CCDC9-202ENST00000595659 SNRKQ9NRH2 765 aa20.99■□□□□ 0.95
CCDC9-202ENST00000595659 PHF20L1A8MW92 1017 aa20.98■□□□□ 0.95
CCDC9-202ENST00000595659 TLR2O60603 784 aa20.98■□□□□ 0.95
CCDC9-202ENST00000595659 SURF6O75683 361 aaKnown RBP20.98■□□□□ 0.95
CCDC9-202ENST00000595659 ARID4AP29374 1257 aaPredicted RBP20.98■□□□□ 0.95
CCDC9-202ENST00000595659 SSH3Q8TE77 659 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms