RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TBC1D22AQ8WUA7 517 aa16.45■□□□□ 0.22
H3F3B-213ENST00000593254 LPIN2Q92539 896 aa16.45■□□□□ 0.22
H3F3B-213ENST00000593254 ZFYVE28Q9HCC9 887 aa16.45■□□□□ 0.22
H3F3B-213ENST00000593254 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
H3F3B-213ENST00000593254 GNAI3P08754 354 aa16.44■□□□□ 0.22
H3F3B-213ENST00000593254 SLC5A1P13866 664 aa16.44■□□□□ 0.22
H3F3B-213ENST00000593254 RBM5P52756 815 aaKnown RBP eCLIP16.44■□□□□ 0.22
H3F3B-213ENST00000593254 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
H3F3B-213ENST00000593254 TAF1CQ15572 869 aaPredicted RBP16.44■□□□□ 0.22
H3F3B-213ENST00000593254 TEPSINQ96N21 525 aa16.44■□□□□ 0.22
H3F3B-213ENST00000593254 SIL1Q9H173 461 aa16.44■□□□□ 0.22
H3F3B-213ENST00000593254 CCL15-CCL14A0A0B4J2E2 113 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 GTF2A2P52657 109 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 TNFAIP1Q13829 316 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 GRIK5Q16478 980 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 CCL15Q16663 113 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 PA2G4Q9UQ80 394 aaKnown RBP16.43■□□□□ 0.22
H3F3B-213ENST00000593254 TNNQ9UQP3 1299 aa16.43■□□□□ 0.22
H3F3B-213ENST00000593254 IL15P40933 162 aaPredicted RBP16.42■□□□□ 0.22
H3F3B-213ENST00000593254 CRKP46108 304 aa16.42■□□□□ 0.22
H3F3B-213ENST00000593254 HDLBPQ00341 1268 aaKnown RBP16.42■□□□□ 0.22
H3F3B-213ENST00000593254 MTX1Q13505 466 aa16.42■□□□□ 0.22
H3F3B-213ENST00000593254 VGLL4Q14135 290 aa16.42■□□□□ 0.22
H3F3B-213ENST00000593254 CDAN1Q8IWY9 1227 aa16.42■□□□□ 0.22
H3F3B-213ENST00000593254 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
H3F3B-213ENST00000593254 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
H3F3B-213ENST00000593254 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
H3F3B-213ENST00000593254 CEP126Q9P2H0 1117 aa16.42■□□□□ 0.22
H3F3B-213ENST00000593254 ZNF70Q9UC06 446 aaPredicted RBP16.42■□□□□ 0.22
H3F3B-213ENST00000593254 TLR2O60603 784 aa16.41■□□□□ 0.22
H3F3B-213ENST00000593254 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
H3F3B-213ENST00000593254 CHRDL2Q6WN34 429 aa16.41■□□□□ 0.22
H3F3B-213ENST00000593254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.41■□□□□ 0.225e-10■□□□□ 10.1
H3F3B-213ENST00000593254 SHISA4Q96DD7 197 aa16.41■□□□□ 0.22
H3F3B-213ENST00000593254 ARHGAP39Q9C0H5 1083 aa16.41■□□□□ 0.22
H3F3B-213ENST00000593254 TDRD3Q9H7E2 651 aaKnown RBP16.41■□□□□ 0.22
H3F3B-213ENST00000593254 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
H3F3B-213ENST00000593254 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
H3F3B-213ENST00000593254 MYCP01106 439 aaPredicted RBP16.4■□□□□ 0.22
H3F3B-213ENST00000593254 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
H3F3B-213ENST00000593254 LACTBP83111 547 aaPredicted RBP16.4■□□□□ 0.22
H3F3B-213ENST00000593254 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
H3F3B-213ENST00000593254 MRIQ9BWK5 157 aa16.4■□□□□ 0.22
H3F3B-213ENST00000593254 PRO3102Q9H379 93 aa16.4■□□□□ 0.22
H3F3B-213ENST00000593254 ZBED9Q6R2W3 1325 aa16.4■□□□□ 0.22
H3F3B-213ENST00000593254 SRGAP3O43295 1099 aa16.39■□□□□ 0.21
H3F3B-213ENST00000593254 GNRH1P01148 92 aa16.39■□□□□ 0.21
H3F3B-213ENST00000593254 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
H3F3B-213ENST00000593254 WDR66Q8TBY9 1149 aa16.39■□□□□ 0.21
H3F3B-213ENST00000593254 TEKT1Q969V4 418 aa16.39■□□□□ 0.21
H3F3B-213ENST00000593254 TMEM39BQ9GZU3 492 aa16.39■□□□□ 0.21
H3F3B-213ENST00000593254 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
H3F3B-213ENST00000593254 MAST3O60307 1309 aa16.39■□□□□ 0.21
H3F3B-213ENST00000593254 PRMT2P55345 433 aa16.38■□□□□ 0.21
H3F3B-213ENST00000593254 UBE2Q1Q7Z7E8 422 aa16.38■□□□□ 0.21
H3F3B-213ENST00000593254 ZDHHC15Q96MV8 337 aa16.38■□□□□ 0.21
H3F3B-213ENST00000593254 SPDYE5A6NIY4 337 aa16.37■□□□□ 0.21
H3F3B-213ENST00000593254 ZBTB22O15209 634 aa16.37■□□□□ 0.21
H3F3B-213ENST00000593254 GNAI2P04899 355 aa16.37■□□□□ 0.21
H3F3B-213ENST00000593254 MTFR1Q15390 333 aa16.37■□□□□ 0.21
H3F3B-213ENST00000593254 HHIPL2Q6UWX4 724 aa16.37■□□□□ 0.21
H3F3B-213ENST00000593254 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
H3F3B-213ENST00000593254 CSADQ9Y600 493 aa16.37■□□□□ 0.21
H3F3B-213ENST00000593254 UNC80Q8N2C7 3258 aa16.36■□□□□ 0.21
H3F3B-213ENST00000593254 TCP10L2B9ZVM9 353 aa16.36■□□□□ 0.21
H3F3B-213ENST00000593254 BTBD19C9JJ37 291 aa16.36■□□□□ 0.21
H3F3B-213ENST00000593254 CETPP11597 493 aa16.36■□□□□ 0.21
H3F3B-213ENST00000593254 PHKA1P46020 1223 aa16.36■□□□□ 0.21
H3F3B-213ENST00000593254 KIF22Q14807 665 aa16.36■□□□□ 0.21
H3F3B-213ENST00000593254 GNL3LQ9NVN8 582 aaKnown RBP16.36■□□□□ 0.21
H3F3B-213ENST00000593254 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
H3F3B-213ENST00000593254 MYH2Q9UKX2 1941 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 SEMA3EO15041 775 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 ABCB7O75027 752 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 WDHD1O75717 1129 aaPredicted RBP16.35■□□□□ 0.21
H3F3B-213ENST00000593254 CTGFP29279 349 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 ADORA1P30542 326 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 TNNI2P48788 182 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 APOBEC3HQ6NTF7 200 aaKnown RBP16.35■□□□□ 0.21
H3F3B-213ENST00000593254 C17orf99Q6UX52 265 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 ERO1BQ86YB8 467 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 DPF3Q92784 378 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 SALL1Q9NSC2 1324 aa16.35■□□□□ 0.21
H3F3B-213ENST00000593254 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 DLL1O00548 723 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 IRF6O14896 467 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 PRDX5P30044 214 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 TFCP2Q12800 502 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 FKBP1CQ5VVH2 108 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 CCDC102BQ68D86 513 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
H3F3B-213ENST00000593254 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 SRRDQ9UH36 339 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 AKAP2Q9Y2D5 859 aa16.34■□□□□ 0.21
H3F3B-213ENST00000593254 A0A1B0GUL7 405 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 GJA8P48165 433 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms