RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 VEZTQ9HBM0 779 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 GBA2Q9HCG7 927 aaPredicted RBP11.72□□□□□ -0.53
DDX39A-220ENST00000593008 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
DDX39A-220ENST00000593008 SEMA3EO15041 775 aa11.71□□□□□ -0.53
DDX39A-220ENST00000593008 AOC2O75106 756 aa11.71□□□□□ -0.53
DDX39A-220ENST00000593008 IDH1O75874 414 aaKnown RBP11.71□□□□□ -0.53
DDX39A-220ENST00000593008 MOB2Q70IA6 237 aa11.71□□□□□ -0.53
DDX39A-220ENST00000593008 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.53
DDX39A-220ENST00000593008 RILPL2Q969X0 211 aa11.71□□□□□ -0.53
DDX39A-220ENST00000593008 PDS5AQ29RF7 1337 aaKnown RBP11.7□□□□□ -0.54
DDX39A-220ENST00000593008 ERC2O15083 957 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 MYO1BO43795 1136 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 ECE1P42892 770 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 CRKP46108 304 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 PRKG1Q13976 671 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 APOBEC3FQ8IUX4 373 aaKnown RBP11.7□□□□□ -0.54
DDX39A-220ENST00000593008 MTMR14Q8NCE2 650 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 FSD1Q9BTV5 496 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 DEFB129Q9H1M3 183 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
DDX39A-220ENST00000593008 RAI14Q9P0K7 980 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 SERPINA10Q9UK55 444 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 POLR2AP24928 1970 aaKnown RBP11.7□□□□□ -0.54
DDX39A-220ENST00000593008 TRPM7Q96QT4 1865 aa11.7□□□□□ -0.54
DDX39A-220ENST00000593008 SALL1Q9NSC2 1324 aa11.69□□□□□ -0.54
DDX39A-220ENST00000593008 PDE6AP16499 860 aa11.69□□□□□ -0.54
DDX39A-220ENST00000593008 MECOMQ03112 1051 aa11.69□□□□□ -0.54
DDX39A-220ENST00000593008 TTLL12Q14166 644 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-220ENST00000593008 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
DDX39A-220ENST00000593008 WDR66Q8TBY9 1149 aa11.69□□□□□ -0.54
DDX39A-220ENST00000593008 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
DDX39A-220ENST00000593008 SEC62Q99442 399 aaKnown RBP11.69□□□□□ -0.54
DDX39A-220ENST00000593008 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-220ENST00000593008 FZD1Q9UP38 647 aa11.69□□□□□ -0.54
DDX39A-220ENST00000593008 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 TCRBV5S4A2TA0A5A2 114 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 UBE2Q2LH0YL09 131 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 M0R2C6 588 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-220ENST00000593008 CACNB3P54284 484 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 RGMBQ6NW40 437 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 CCDC129Q6ZRS4 1044 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 KBTBD3Q8NAB2 608 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 TEKT1Q969V4 418 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 NSUN4Q96CB9 384 aaKnown RBP11.68□□□□□ -0.54
DDX39A-220ENST00000593008 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-220ENST00000593008 LRP2BPQ9P2M1 347 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
DDX39A-220ENST00000593008 ZNF532Q9HCE3 1301 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 MYH7P12883 1935 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 TCP10L2B9ZVM9 353 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 FOXN1O15353 648 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
DDX39A-220ENST00000593008 NF2P35240 595 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 DYNLL1P63167 89 aaKnown RBP11.67□□□□□ -0.54
DDX39A-220ENST00000593008 NMIQ13287 307 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-220ENST00000593008 RASA3Q14644 834 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
DDX39A-220ENST00000593008 EVI5LQ96CN4 794 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 HHIPL1Q96JK4 782 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 ZIC5Q96T25 663 aa11.67□□□□□ -0.54
DDX39A-220ENST00000593008 MAST3O60307 1309 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 ZBTB22O15209 634 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 CYP7A1P22680 504 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 ADD2P35612 726 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 SLC9C2Q5TAH2 1124 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 AIDAQ96BJ3 306 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 SUGT1Q9Y2Z0 365 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 DAGLAQ9Y4D2 1042 aa11.66□□□□□ -0.54
DDX39A-220ENST00000593008 FAM155AB1AL88 458 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 RNF113AO15541 343 aaKnown RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 CHMLP26374 656 aa11.65□□□□□ -0.54
DDX39A-220ENST00000593008 FKBP1BP68106 108 aa11.65□□□□□ -0.54
DDX39A-220ENST00000593008 HDLBPQ00341 1268 aaKnown RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 MAP2K1Q02750 393 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 NBPF12Q5TAG4 269 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 APOBEC3HQ6NTF7 200 aaKnown RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 ZNF589Q86UQ0 364 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 LCORLQ8N3X6 602 aa11.65□□□□□ -0.54
DDX39A-220ENST00000593008 OSBP2Q969R2 916 aa11.65□□□□□ -0.54
DDX39A-220ENST00000593008 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.54
DDX39A-220ENST00000593008 PUS7LQ9H0K6 701 aaKnown RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 ARMT1Q9H993 441 aa11.65□□□□□ -0.54
DDX39A-220ENST00000593008 ANGEL1Q9UNK9 670 aaKnown RBP11.65□□□□□ -0.54
DDX39A-220ENST00000593008 MROH7-TTC4A0A0A0MT08 1334 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 PRKAB2O43741 272 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 MBD4O95243 580 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 MAP2K2P36507 400 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 BTDP43251 543 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 EVX2Q03828 476 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 MAP3K12Q12852 859 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 MKRN3Q13064 507 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms