RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 TMOD2Q9NZR1 351 aa18.37■□□□□ 0.53
SF3A2-207ENST00000592839 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
SF3A2-207ENST00000592839 TRPA1O75762 1119 aa18.36■□□□□ 0.53
SF3A2-207ENST00000592839 ALDH1A1P00352 501 aa18.36■□□□□ 0.53
SF3A2-207ENST00000592839 COL2A1P02458 1487 aaPredicted RBP18.36■□□□□ 0.53
SF3A2-207ENST00000592839 G3BP1Q13283 466 aaKnown RBP eCLIP18.36■□□□□ 0.53
SF3A2-207ENST00000592839 ATRNL1Q5VV63 1379 aa18.36■□□□□ 0.53
SF3A2-207ENST00000592839 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.36■□□□□ 0.53
SF3A2-207ENST00000592839 FAM151AQ8WW52 585 aa18.36■□□□□ 0.53
SF3A2-207ENST00000592839 CLMNQ96JQ2 1002 aa18.36■□□□□ 0.53
SF3A2-207ENST00000592839 DOCK2Q92608 1830 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 TCP10L2B9ZVM9 353 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 MAP4K4O95819 1239 aaPredicted RBP18.35■□□□□ 0.53
SF3A2-207ENST00000592839 DIXDC1Q155Q3 683 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 SPTY2D1Q68D10 685 aaPredicted RBP18.35■□□□□ 0.53
SF3A2-207ENST00000592839 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 CEP85Q6P2H3 762 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 SLC10A4Q96EP9 437 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 HMG20BQ9P0W2 317 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 FZD1Q9UP38 647 aa18.35■□□□□ 0.53
SF3A2-207ENST00000592839 GJA5P36382 358 aa18.34■□□□□ 0.53
SF3A2-207ENST00000592839 TNNI3KQ59H18 835 aa18.34■□□□□ 0.53
SF3A2-207ENST00000592839 SLF2Q8IX21 1173 aa18.34■□□□□ 0.53
SF3A2-207ENST00000592839 FPGT-TNNI3KV9GXZ4 949 aa18.34■□□□□ 0.53
SF3A2-207ENST00000592839 MAP3K9P80192 1104 aa18.33■□□□□ 0.52
SF3A2-207ENST00000592839 MAP3K10Q02779 954 aa18.33■□□□□ 0.52
SF3A2-207ENST00000592839 PRKG1Q13976 671 aa18.33■□□□□ 0.52
SF3A2-207ENST00000592839 ZNF384Q8TF68 577 aa18.33■□□□□ 0.52
SF3A2-207ENST00000592839 ZNF112Q9UJU3 913 aa18.33■□□□□ 0.52
SF3A2-207ENST00000592839 MROH7-TTC4A0A0A0MT08 1334 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 GPR75-ASB3A0A0A6YYF3 556 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 SPDYE5A6NIY4 337 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 ENTPD3O75355 529 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 UQCRFS1P1P0C7P4 283 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 CACNB3P54284 484 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 VGLL4Q14135 290 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 DCAF15Q66K64 600 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 IFNL1Q8IU54 200 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 SPATA5Q8NB90 893 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 MS4A4AQ96JQ5 239 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 FAM198AQ9UFP1 575 aa18.32■□□□□ 0.52
SF3A2-207ENST00000592839 HTTP42858 3142 aa18.31■□□□□ 0.52
SF3A2-207ENST00000592839 MCAMP43121 646 aa18.31■□□□□ 0.52
SF3A2-207ENST00000592839 NFIAQ12857 509 aa18.31■□□□□ 0.52
SF3A2-207ENST00000592839 NSUN4Q96CB9 384 aaKnown RBP18.31■□□□□ 0.52
SF3A2-207ENST00000592839 ZCCHC17Q9NP64 241 aaKnown RBP18.31■□□□□ 0.52
SF3A2-207ENST00000592839 ZBTB40Q9NUA8 1239 aa18.31■□□□□ 0.52
SF3A2-207ENST00000592839 DDX19BQ9UMR2 479 aa18.31■□□□□ 0.52
SF3A2-207ENST00000592839 FOCADQ5VW36 1801 aa18.3■□□□□ 0.52
SF3A2-207ENST00000592839 IGF2BP3O00425 579 aaKnown RBP eCLIP18.3■□□□□ 0.52
SF3A2-207ENST00000592839 WDHD1O75717 1129 aaPredicted RBP18.3■□□□□ 0.52
SF3A2-207ENST00000592839 RHBDL3P58872 404 aa18.3■□□□□ 0.52
SF3A2-207ENST00000592839 NOL9Q5SY16 702 aaKnown RBP18.3■□□□□ 0.52
SF3A2-207ENST00000592839 TMED8Q6PL24 325 aaPredicted RBP18.3■□□□□ 0.52
SF3A2-207ENST00000592839 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
SF3A2-207ENST00000592839 OPTNQ96CV9 577 aa18.3■□□□□ 0.52
SF3A2-207ENST00000592839 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
SF3A2-207ENST00000592839 SNCAIPQ9Y6H5 919 aa18.3■□□□□ 0.52
SF3A2-207ENST00000592839 GPR25O00155 361 aa18.29■□□□□ 0.52
SF3A2-207ENST00000592839 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
SF3A2-207ENST00000592839 MECOMQ03112 1051 aa18.29■□□□□ 0.52
SF3A2-207ENST00000592839 PDE3AQ14432 1141 aa18.29■□□□□ 0.52
SF3A2-207ENST00000592839 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
SF3A2-207ENST00000592839 CTU1Q7Z7A3 348 aaKnown RBP18.29■□□□□ 0.52
SF3A2-207ENST00000592839 DZIP1Q86YF9 867 aaKnown RBP18.29■□□□□ 0.52
SF3A2-207ENST00000592839 RPAP2Q8IXW5 612 aaPredicted RBP18.29■□□□□ 0.52
SF3A2-207ENST00000592839 NEUROD6Q96NK8 337 aa18.29■□□□□ 0.52
SF3A2-207ENST00000592839 ZNF341Q9BYN7 854 aa18.29■□□□□ 0.52
SF3A2-207ENST00000592839 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
SF3A2-207ENST00000592839 CSADQ9Y600 493 aa18.29■□□□□ 0.52
SF3A2-207ENST00000592839 PDE4DIPQ5VU43 2346 aa18.28■□□□□ 0.52
SF3A2-207ENST00000592839 PKN2Q16513 984 aaKnown RBP18.28■□□□□ 0.52
SF3A2-207ENST00000592839 ERO1BQ86YB8 467 aa18.28■□□□□ 0.52
SF3A2-207ENST00000592839 ERC1Q8IUD2 1116 aa18.28■□□□□ 0.52
SF3A2-207ENST00000592839 ZNF296Q8WUU4 475 aaPredicted RBP18.28■□□□□ 0.52
SF3A2-207ENST00000592839 PTPN18Q99952 460 aa18.28■□□□□ 0.52
SF3A2-207ENST00000592839 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
SF3A2-207ENST00000592839 USP40Q9NVE5 1235 aa18.28■□□□□ 0.52
SF3A2-207ENST00000592839 DBNLQ9UJU6 430 aaKnown RBP18.28■□□□□ 0.52
SF3A2-207ENST00000592839 CDK5RAP2Q96SN8 1893 aa18.28■□□□□ 0.52
SF3A2-207ENST00000592839 GSTO1P78417 241 aa18.27■□□□□ 0.52
SF3A2-207ENST00000592839 PI16Q6UXB8 463 aa18.27■□□□□ 0.52
SF3A2-207ENST00000592839 WRNIP1Q96S55 665 aa18.27■□□□□ 0.52
SF3A2-207ENST00000592839 DBNDD2Q9BQY9 259 aa18.27■□□□□ 0.52
SF3A2-207ENST00000592839 ELP3Q9H9T3 547 aa18.27■□□□□ 0.52
SF3A2-207ENST00000592839 ABCF2Q9UG63 623 aa18.27■□□□□ 0.52
SF3A2-207ENST00000592839 MYO5AQ9Y4I1 1855 aaKnown RBP18.26■□□□□ 0.51
SF3A2-207ENST00000592839 TBC1D8O95759 1140 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 LDHCP07864 332 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 BTDP43251 543 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 GTF2A2P52657 109 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 PPATQ06203 517 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 PPIL2Q13356 520 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 CCDC158Q5M9N0 1113 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 OTUD7BQ6GQQ9 843 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 EAF2Q96CJ1 260 aaPredicted RBP18.26■□□□□ 0.51
SF3A2-207ENST00000592839 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
SF3A2-207ENST00000592839 PTPRFP10586 1907 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms