RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 DHX58Q96C10 678 aa14.42□□□□□ -0.1
DNMT1-228ENST00000592705 MAGEB6P1A0A0J9YX57 407 aa14.42□□□□□ -0.1
DNMT1-228ENST00000592705 PSMA7O14818 248 aa14.42□□□□□ -0.1
DNMT1-228ENST00000592705 DNA2P51530 1060 aa14.42□□□□□ -0.1
DNMT1-228ENST00000592705 ZNF75DP51815 510 aa14.42□□□□□ -0.1
DNMT1-228ENST00000592705 LEO1Q8WVC0 666 aaPredicted RBP14.42□□□□□ -0.1
DNMT1-228ENST00000592705 MCM9Q9NXL9 1143 aa14.42□□□□□ -0.1
DNMT1-228ENST00000592705 MYO5CQ9NQX4 1742 aa14.42□□□□□ -0.1
DNMT1-228ENST00000592705 AKR1B10O60218 316 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.41□□□□□ -0.19e-7■□□□□ 10
DNMT1-228ENST00000592705 V9GYY5 206 aaPredicted RBP14.41□□□□□ -0.1
DNMT1-228ENST00000592705 TEX11Q8IYF3 940 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 PLBD2Q8NHP8 589 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 FAM89AQ96GI7 184 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 ERO1AQ96HE7 468 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 FAM227BQ96M60 508 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 CBX8Q9HC52 389 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 A0A1B0GVL5 298 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 GBP2P32456 591 aaPredicted RBP14.41□□□□□ -0.1
DNMT1-228ENST00000592705 FAM182BQ5T319 152 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 CCDC24Q8N4L8 307 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 SMARCC2Q8TAQ2 1214 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 ABCA8O94911 1581 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 LOC102724428A0A0B4J2F2 783 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 SIK1P57059 783 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 WDR66Q8TBY9 1149 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 JCADQ9P266 1359 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 SAMD9LQ8IVG5 1584 aa14.41□□□□□ -0.1
DNMT1-228ENST00000592705 KRT2P35908 639 aa14.4□□□□□ -0.1
DNMT1-228ENST00000592705 DCAF15Q66K64 600 aa14.4□□□□□ -0.1
DNMT1-228ENST00000592705 TBC1D22AQ8WUA7 517 aa14.4□□□□□ -0.1
DNMT1-228ENST00000592705 ARHGEF10LQ9HCE6 1279 aa14.4□□□□□ -0.1
DNMT1-228ENST00000592705 THRAP3Q9Y2W1 955 aaKnown RBP14.4□□□□□ -0.1
DNMT1-228ENST00000592705 KRT83P78385 493 aa14.4□□□□□ -0.1
DNMT1-228ENST00000592705 PABPC4Q13310 644 aaKnown RBP eCLIP14.4□□□□□ -0.12e-9■■■■□ 20.9
DNMT1-228ENST00000592705 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.1
DNMT1-228ENST00000592705 IFI16Q16666 785 aaKnown RBP14.4□□□□□ -0.1
DNMT1-228ENST00000592705 CERS3Q8IU89 383 aa14.4□□□□□ -0.1
DNMT1-228ENST00000592705 DALRD3Q5D0E6 543 aaKnown RBP14.4□□□□□ -0.1
DNMT1-228ENST00000592705 CLASP1Q7Z460 1538 aa14.4□□□□□ -0.1
DNMT1-228ENST00000592705 DYDC1Q8WWB3 177 aa14.4□□□□□ -0.1
DNMT1-228ENST00000592705 EYA2O00167 538 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 TSPOAP1O95153 1857 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 IVLP07476 585 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 CALML3P27482 149 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 STXBP4Q6ZWJ1 553 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 SMAP1Q8IYB5 467 aaPredicted RBP14.39□□□□□ -0.11
DNMT1-228ENST00000592705 JAG2Q9Y219 1238 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 A1BGP04217 495 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 SSH3Q8TE77 659 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 CCDC129Q6ZRS4 1044 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 GCOM1H8Y6P7 765 aaPredicted RBP14.39□□□□□ -0.11
DNMT1-228ENST00000592705 HSF2BPO75031 334 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 TUBBP07437 444 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 MYZAPP0CAP1 466 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 TRERF1Q96PN7 1200 aa14.39□□□□□ -0.11
DNMT1-228ENST00000592705 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 ZNF500O60304 480 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-228ENST00000592705 ANO1Q5XXA6 986 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 IMPACTQ9P2X3 320 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 TMCO5BA8MYB1 307 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 CETN1Q12798 172 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 DBNDD2Q9BQY9 259 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 FAM135BQ49AJ0 1406 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 RIOK3O14730 519 aaKnown RBP14.38□□□□□ -0.11
DNMT1-228ENST00000592705 SUCLG2Q96I99 432 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 TMEM87BQ96K49 555 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 EFCAB6Q5THR3 1501 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 KRT86O43790 486 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 HSPA1LP34931 641 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 MAP2K1Q02750 393 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-228ENST00000592705 MCM6Q14566 821 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 CDC37L1Q7L3B6 337 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 ERMNQ8TAM6 284 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 TAOK3Q9H2K8 898 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 TACC1O75410 805 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 SSR1P43307 286 aaKnown RBP14.38□□□□□ -0.11
DNMT1-228ENST00000592705 FAM173BQ6P4H8 233 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 BRINP3Q76B58 766 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 KBTBD3Q8NAB2 608 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 BAG1Q99933 345 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-228ENST00000592705 GOPCQ9HD26 462 aa14.38□□□□□ -0.11
DNMT1-228ENST00000592705 A0A1B0GUL7 405 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 CNGA4Q8IV77 575 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 MAGEB6Q8N7X4 407 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 IBTKQ9P2D0 1353 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-228ENST00000592705 NOP2P46087 812 aaKnown RBP14.37□□□□□ -0.11
DNMT1-228ENST00000592705 RILPL1Q5EBL4 403 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 TCERG1LQ5VWI1 586 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 CCDC113Q9H0I3 377 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 ANTXR1Q9H6X2 564 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 BCCIPQ9P287 314 aaKnown RBP eCLIP14.37□□□□□ -0.11
DNMT1-228ENST00000592705 RGS12O14924 1447 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 LPXNO60711 386 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 EIF4A1P60842 406 aaKnown RBP14.37□□□□□ -0.11
DNMT1-228ENST00000592705 RPS8P62241 208 aaKnown RBP14.37□□□□□ -0.11
DNMT1-228ENST00000592705 AATKQ6ZMQ8 1374 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 RNF187Q5TA31 235 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-228ENST00000592705 MAATS1Q7Z4T9 603 aa14.37□□□□□ -0.11
DNMT1-228ENST00000592705 LGR6Q9HBX8 967 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms