RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NFE2L2Q16236 605 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 IL22RA1Q8N6P7 574 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 NUDT8Q8WV74 236 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 PRKAG3Q9UGI9 489 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 MRVI1Q9Y6F6 885 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 TLR3O15455 904 aaKnown RBP9.41□□□□□ -0.9
VMP1-215ENST00000592619 BPNT1O95861 308 aa9.41□□□□□ -0.9
VMP1-215ENST00000592619 GSTP1P09211 210 aaKnown RBP9.41□□□□□ -0.9
VMP1-215ENST00000592619 RPL6Q02878 288 aaKnown RBP9.41□□□□□ -0.9
VMP1-215ENST00000592619 ANKS3Q6ZW76 656 aa9.41□□□□□ -0.9
VMP1-215ENST00000592619 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
VMP1-215ENST00000592619 OSGEPQ9NPF4 335 aa9.41□□□□□ -0.9
VMP1-215ENST00000592619 SIRPGQ9P1W8 387 aa9.41□□□□□ -0.9
VMP1-215ENST00000592619 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
VMP1-215ENST00000592619 IMPDH2P12268 514 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 GMPRP36959 345 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 GIPRP48546 466 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 ARL4DP49703 201 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 AFF1P51825 1210 aaKnown RBP9.4□□□□□ -0.9
VMP1-215ENST00000592619 C19orf57Q0VDD7 668 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 RAB33AQ14088 237 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 RNFT1Q5M7Z0 435 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 FAM117BQ6P1L5 589 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 PUS7Q96PZ0 661 aaKnown RBP9.4□□□□□ -0.9
VMP1-215ENST00000592619 BRMS1Q9HCU9 246 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 JPH1Q9HDC5 661 aaPredicted RBP9.4□□□□□ -0.9
VMP1-215ENST00000592619 PPT2Q9UMR5 302 aa9.4□□□□□ -0.9
VMP1-215ENST00000592619 LILRB5O75023 590 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 ALBP02768 609 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 CYP11A1P05108 521 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 MCM4P33991 863 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 GSTM4Q03013 218 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 PTPN11Q06124 597 aaPredicted RBP9.39□□□□□ -0.91
VMP1-215ENST00000592619 TNNI3KQ59H18 835 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 ZNF746Q6NUN9 644 aaPredicted RBP9.39□□□□□ -0.91
VMP1-215ENST00000592619 OR6P1Q8NGX9 317 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 NRSN2Q9GZP1 204 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 EHMT1Q9H9B1 1298 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
VMP1-215ENST00000592619 CDK11AQ9UQ88 783 aaPredicted RBP9.39□□□□□ -0.91
VMP1-215ENST00000592619 EIF6P56537 245 aaKnown RBP9.38□□□□□ -0.91
VMP1-215ENST00000592619 MAP1SQ66K74 1059 aaPredicted RBP9.38□□□□□ -0.91
VMP1-215ENST00000592619 HGSNATQ68CP4 663 aa9.38□□□□□ -0.91
VMP1-215ENST00000592619 RBBP8NLQ8NC74 664 aaPredicted RBP9.38□□□□□ -0.91
VMP1-215ENST00000592619 SLC16A10Q8TF71 515 aa9.38□□□□□ -0.91
VMP1-215ENST00000592619 FERD3LQ96RJ6 166 aa9.38□□□□□ -0.91
VMP1-215ENST00000592619 PRDM6Q9NQX0 595 aa9.38□□□□□ -0.91
VMP1-215ENST00000592619 KRT82Q9NSB4 513 aa9.38□□□□□ -0.91
VMP1-215ENST00000592619 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
VMP1-215ENST00000592619 ABCC9O60706 1549 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 K7ELQ4 463 aaPredicted RBP9.37□□□□□ -0.91
VMP1-215ENST00000592619 EIF5BO60841 1220 aaKnown RBP9.37□□□□□ -0.91
VMP1-215ENST00000592619 ATE1O95260 518 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 BMS1Q14692 1282 aaKnown RBP9.37□□□□□ -0.91
VMP1-215ENST00000592619 MPRIPQ6WCQ1 1025 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 CCDC81Q6ZN84 652 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 LRP10Q7Z4F1 713 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 ACDQ96AP0 544 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 CRBNQ96SW2 442 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 TRIM55Q9BYV6 548 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 LRRC4BQ9NT99 713 aa9.37□□□□□ -0.91
VMP1-215ENST00000592619 LINC01387J3KSC0 135 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 FSCN2O14926 492 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 CLCQ05315 142 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 POU4F3Q15319 338 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 C1orf229Q6ZS94 237 aaPredicted RBP9.36□□□□□ -0.91
VMP1-215ENST00000592619 ILDR2Q71H61 639 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 WFDC8Q8IUA0 241 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 SLC7A3Q8WY07 619 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 KCNB2Q92953 911 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 MRFAP1L1Q96HT8 127 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 CORO1BQ9BR76 489 aa9.36□□□□□ -0.91
VMP1-215ENST00000592619 R3HCC1Q9Y3T6 440 aaKnown RBP9.36□□□□□ -0.91
VMP1-215ENST00000592619 PRR36Q9H6K5 1346 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 M0R082 166 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 TM4SF5O14894 197 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
VMP1-215ENST00000592619 SMAD7O15105 426 aaKnown RBP9.35□□□□□ -0.91
VMP1-215ENST00000592619 CDC25BP30305 580 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 MSL1Q68DK7 614 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 GK5Q6ZS86 529 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 KLHL23Q8NBE8 558 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 ZNF417Q8TAU3 575 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 HNRNPLLQ8WVV9 542 aaKnown RBP9.35□□□□□ -0.91
VMP1-215ENST00000592619 EDARADDQ8WWZ3 215 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 ZNF587Q96SQ5 575 aaPredicted RBP9.35□□□□□ -0.91
VMP1-215ENST00000592619 POLR3KQ9Y2Y1 108 aaPredicted RBP9.35□□□□□ -0.91
VMP1-215ENST00000592619 SNCAIPQ9Y6H5 919 aa9.35□□□□□ -0.91
VMP1-215ENST00000592619 GFRA2O00451 464 aa9.34□□□□□ -0.91
VMP1-215ENST00000592619 HNRNPUQ00839 825 aaKnown RBP eCLIP9.34□□□□□ -0.91
VMP1-215ENST00000592619 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
VMP1-215ENST00000592619 CHSY3Q70JA7 882 aa9.34□□□□□ -0.91
VMP1-215ENST00000592619 MAP4K3Q8IVH8 894 aa9.34□□□□□ -0.91
VMP1-215ENST00000592619 FAM169BQ8N8A8 192 aa9.34□□□□□ -0.91
VMP1-215ENST00000592619 GPBAR1Q8TDU6 330 aa9.34□□□□□ -0.91
VMP1-215ENST00000592619 PCDHB14Q9Y5E9 798 aa9.34□□□□□ -0.91
VMP1-215ENST00000592619 TACC3Q9Y6A5 838 aa9.34□□□□□ -0.91
VMP1-215ENST00000592619 OIP5O43482 229 aa9.33□□□□□ -0.92
VMP1-215ENST00000592619 ADAMTS2O95450 1211 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms