RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 ABCC11Q96J66 1382 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 ARHGEF5Q12774 1597 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 NWD1Q149M9 1564 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 RAD50Q92878 1312 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 TULP2O00295 520 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 ELNP15502 786 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 LTKP29376 864 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 RARSP54136 660 aaKnown RBP7.08□□□□□ -1.28
NPC1-213ENST00000591955 CBX1P83916 185 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 TEX35Q5T0J7 233 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 THEMISQ8N1K5 641 aaPredicted RBP7.08□□□□□ -1.28
NPC1-213ENST00000591955 ZNF622Q969S3 477 aaKnown RBP eCLIP7.08□□□□□ -1.28
NPC1-213ENST00000591955 LENG1Q96BZ8 264 aaPredicted RBP7.08□□□□□ -1.28
NPC1-213ENST00000591955 TESK2Q96S53 571 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 LMBRD1Q9NUN5 540 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 COG6Q9Y2V7 657 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 PARP3Q9Y6F1 533 aa7.08□□□□□ -1.28
NPC1-213ENST00000591955 MORC2Q9Y6X9 1032 aaPredicted RBP7.08□□□□□ -1.28
NPC1-213ENST00000591955 SLIT1O75093 1534 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 SMTNL1A8MU46 457 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 EPB41L2O43491 1005 aaKnown RBP7.07□□□□□ -1.28
NPC1-213ENST00000591955 NEMFO60524 1076 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 SFSWAPQ12872 951 aaKnown RBP7.07□□□□□ -1.28
NPC1-213ENST00000591955 GPS2Q13227 327 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 MAP7D1Q3KQU3 841 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 CC2D1BQ5T0F9 858 aaKnown RBP7.07□□□□□ -1.28
NPC1-213ENST00000591955 MCTP1Q6DN14 999 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 LRRC69Q6ZNQ3 347 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 SKAP1Q86WV1 359 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 DZIP1LQ8IYY4 767 aaKnown RBP7.07□□□□□ -1.28
NPC1-213ENST00000591955 C7orf43Q8WVR3 580 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 SSBP4Q9BWG4 385 aaPredicted RBP7.07□□□□□ -1.28
NPC1-213ENST00000591955 RBSNQ9H1K0 784 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 CFDP1Q9UEE9 299 aaPredicted RBP7.07□□□□□ -1.28
NPC1-213ENST00000591955 V9GYY5 206 aaPredicted RBP7.07□□□□□ -1.28
NPC1-213ENST00000591955 DIP2AQ14689 1571 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 MAST1Q9Y2H9 1570 aa7.07□□□□□ -1.28
NPC1-213ENST00000591955 IL16Q14005 1332 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 A0A0A0MRY4 1105 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 EML1O00423 815 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 CDC45O75419 566 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 CAVIN2O95810 425 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 MMP14P50281 582 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 NRG1Q02297 640 aaPredicted RBP7.06□□□□□ -1.28
NPC1-213ENST00000591955 NUCB1Q02818 461 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 NOM1Q5C9Z4 860 aaKnown RBP7.06□□□□□ -1.28
NPC1-213ENST00000591955 TRAPPC3LQ5T215 181 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 TXLNBQ8N3L3 684 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 CEP120Q8N960 986 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 ZDHHC1Q8WTX9 485 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 TP53INP1Q96A56 240 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 DDX41Q9UJV9 622 aaKnown RBP7.06□□□□□ -1.28
NPC1-213ENST00000591955 ATP6V1DQ9Y5K8 247 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.06□□□□□ -1.28
NPC1-213ENST00000591955 JCADQ9P266 1359 aa7.06□□□□□ -1.28
NPC1-213ENST00000591955 CLTCL1P53675 1640 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 ATP8B1O43520 1251 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 LILRB5O75023 590 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 BCAR3O75815 825 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 REC8O95072 547 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 SPEM2Q0P670 501 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 TERF2Q15554 542 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 MUM1L1Q5H9M0 696 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 WWC1Q8IX03 1113 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 PLPP7Q8NBV4 271 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 ZNF397Q8NF99 534 aaPredicted RBP7.05□□□□□ -1.28
NPC1-213ENST00000591955 RUNDC1Q96C34 613 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 INTS4Q96HW7 963 aaKnown RBP7.05□□□□□ -1.28
NPC1-213ENST00000591955 GPC6Q9Y625 555 aaPredicted RBP7.05□□□□□ -1.28
NPC1-213ENST00000591955 DUOX2Q9NRD8 1548 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 KIF24Q5T7B8 1368 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 SBNO2Q9Y2G9 1366 aa7.05□□□□□ -1.28
NPC1-213ENST00000591955 APAF1O14727 1248 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 CALRP27797 417 aaKnown RBP7.04□□□□□ -1.28
NPC1-213ENST00000591955 SSFA2P28290 1259 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 TNNT3P45378 269 aaPredicted RBP7.04□□□□□ -1.28
NPC1-213ENST00000591955 KCNJ4P48050 445 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 TPM4P67936 248 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 IRF5Q13568 498 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 TEAD4Q15561 434 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 MEX3CQ5U5Q3 659 aaKnown RBP7.04□□□□□ -1.28
NPC1-213ENST00000591955 SHISA2Q6UWI4 295 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.04□□□□□ -1.28
NPC1-213ENST00000591955 RPAINQ86UA6 219 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 CFAP53Q96M91 514 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 SCHIP1Q9P0W5 487 aaPredicted RBP7.04□□□□□ -1.28
NPC1-213ENST00000591955 RNF112Q9ULX5 631 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 TBC1D2BQ9UPU7 963 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 NSD2O96028 1365 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 AHDC1Q5TGY3 1603 aaPredicted RBP7.04□□□□□ -1.28
NPC1-213ENST00000591955 KIAA1210Q9ULL0 1709 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 MYO5BQ9ULV0 1848 aa7.04□□□□□ -1.28
NPC1-213ENST00000591955 UNC13BO14795 1591 aa7.03□□□□□ -1.28
NPC1-213ENST00000591955 CCDC171Q6TFL3 1326 aa7.03□□□□□ -1.28
NPC1-213ENST00000591955 TET3O43151 1660 aa7.03□□□□□ -1.28
NPC1-213ENST00000591955 TPM1P09493 284 aa7.03□□□□□ -1.28
NPC1-213ENST00000591955 TSPY4P0CV99 314 aa7.03□□□□□ -1.28
NPC1-213ENST00000591955 TSPY10P0CW01 314 aa7.03□□□□□ -1.28
NPC1-213ENST00000591955 BRPF1P55201 1214 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms