RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 VIL1P09327 827 aaKnown RBP10.61□□□□□ -0.71
DNMT1-224ENST00000591764 TRIM28Q13263 835 aaKnown RBP10.61□□□□□ -0.71
DNMT1-224ENST00000591764 WDR43Q15061 677 aaKnown RBP eCLIP10.61□□□□□ -0.71
DNMT1-224ENST00000591764 NEUROD2Q15784 382 aa10.61□□□□□ -0.71
DNMT1-224ENST00000591764 ZBTB38Q8NAP3 1195 aaPredicted RBP10.61□□□□□ -0.71
DNMT1-224ENST00000591764 ISCA1Q9BUE6 129 aa10.61□□□□□ -0.71
DNMT1-224ENST00000591764 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
DNMT1-224ENST00000591764 RTL9Q8NET4 1388 aa10.61□□□□□ -0.71
DNMT1-224ENST00000591764 PITPNM2Q9BZ72 1349 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 ZBTB24O43167 697 aaPredicted RBP10.6□□□□□ -0.71
DNMT1-224ENST00000591764 EGFRP00533 1210 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 NF2P35240 595 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 CLCN1P35523 988 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 USP46P62068 366 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 CALD1Q05682 793 aaKnown RBP10.6□□□□□ -0.71
DNMT1-224ENST00000591764 RSBN1LQ6PCB5 846 aaPredicted RBP10.6□□□□□ -0.71
DNMT1-224ENST00000591764 RIC3Q7Z5B4 369 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 SYMPKQ92797 1274 aaKnown RBP10.6□□□□□ -0.71
DNMT1-224ENST00000591764 CDCA5Q96FF9 252 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 ZIC5Q96T25 663 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 HDAC9Q9UKV0 1011 aa10.6□□□□□ -0.71
DNMT1-224ENST00000591764 XDHP47989 1333 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 DDX58O95786 925 aaKnown RBP10.59□□□□□ -0.71
DNMT1-224ENST00000591764 USP17L8P0C7I0 530 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 SOX10P56693 466 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 ZNF280AP59817 542 aaPredicted RBP10.59□□□□□ -0.71
DNMT1-224ENST00000591764 TRIM32Q13049 653 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 TPRNQ4KMQ1 711 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 RTL5Q5HYW3 569 aaPredicted RBP10.59□□□□□ -0.71
DNMT1-224ENST00000591764 ANGEL2Q5VTE6 544 aaKnown RBP10.59□□□□□ -0.71
DNMT1-224ENST00000591764 ANKRD18AQ8IVF6 992 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 CYP4X1Q8N118 509 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 OGFOD1Q8N543 542 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 RUNDC1Q96C34 613 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 DACH1Q9UI36 760 aa10.59□□□□□ -0.71
DNMT1-224ENST00000591764 PSME4Q14997 1843 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 SCN9AQ15858 1988 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 ATP2B4P23634 1241 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 MMP14P50281 582 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 SCARF1Q14162 830 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
DNMT1-224ENST00000591764 KRT24Q2M2I5 525 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 PRPF38BQ5VTL8 546 aaKnown RBP10.58□□□□□ -0.72
DNMT1-224ENST00000591764 DUSP27Q5VZP5 1158 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 PODNQ7Z5L7 613 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 RASAL3Q86YV0 1011 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 CSRNP1Q96S65 589 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 CDC5LQ99459 802 aaKnown RBP10.58□□□□□ -0.72
DNMT1-224ENST00000591764 MYOZ2Q9NPC6 264 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 MYO3BQ8WXR4 1341 aa10.58□□□□□ -0.72
DNMT1-224ENST00000591764 MYBBP1AQ9BQG0 1328 aaKnown RBP10.58□□□□□ -0.72
DNMT1-224ENST00000591764 USP17L3A6NCW0 530 aa10.57□□□□□ -0.72
DNMT1-224ENST00000591764 USP17L4A6NCW7 530 aa10.57□□□□□ -0.72
DNMT1-224ENST00000591764 PDE8AO60658 829 aa10.57□□□□□ -0.72
DNMT1-224ENST00000591764 PCCAP05165 728 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-224ENST00000591764 SREBF2Q12772 1141 aa10.57□□□□□ -0.72
DNMT1-224ENST00000591764 DLK2Q6UY11 383 aa10.57□□□□□ -0.72
DNMT1-224ENST00000591764 USP17L1Q7RTZ2 530 aa10.57□□□□□ -0.72
DNMT1-224ENST00000591764 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
DNMT1-224ENST00000591764 KCNQ5Q9NR82 932 aa10.57□□□□□ -0.72
DNMT1-224ENST00000591764 CWC25Q9NXE8 425 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-224ENST00000591764 AVPP01185 164 aa10.56□□□□□ -0.72
DNMT1-224ENST00000591764 WNT7AO00755 349 aa10.55□□□□□ -0.72
DNMT1-224ENST00000591764 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-224ENST00000591764 NOM1Q5C9Z4 860 aaKnown RBP10.55□□□□□ -0.72
DNMT1-224ENST00000591764 ARMC9Q7Z3E5 817 aa10.55□□□□□ -0.72
DNMT1-224ENST00000591764 CRIPAKQ8N1N5 446 aa10.55□□□□□ -0.72
DNMT1-224ENST00000591764 MYD88Q99836 296 aa10.55□□□□□ -0.72
DNMT1-224ENST00000591764 SEC31BQ9NQW1 1179 aa10.55□□□□□ -0.72
DNMT1-224ENST00000591764 MED23Q9ULK4 1368 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 TNRC18O15417 2968 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-224ENST00000591764 ALDH1A1P00352 501 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 GNAI1P63096 354 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 NEXNQ0ZGT2 675 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 CCDC30Q5VVM6 783 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 APOBEC3FQ8IUX4 373 aaKnown RBP10.54□□□□□ -0.72
DNMT1-224ENST00000591764 GCC1Q96CN9 775 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 MRGPRX2Q96LB1 330 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 MBIPQ9NS73 344 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 IFT57Q9NWB7 429 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 MYH3P11055 1940 aa10.54□□□□□ -0.72
DNMT1-224ENST00000591764 ASTN2O75129 1339 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-224ENST00000591764 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-224ENST00000591764 CTSWP56202 376 aa10.53□□□□□ -0.72
DNMT1-224ENST00000591764 FBXO46Q6PJ61 603 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-224ENST00000591764 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
DNMT1-224ENST00000591764 ZNF296Q8WUU4 475 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-224ENST00000591764 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-224ENST00000591764 GMLQ99445 158 aa10.53□□□□□ -0.72
DNMT1-224ENST00000591764 METTL22Q9BUU2 404 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-224ENST00000591764 COA1Q9GZY4 146 aa10.53□□□□□ -0.72
DNMT1-224ENST00000591764 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-224ENST00000591764 PCDHGC3Q9UN70 934 aa10.53□□□□□ -0.72
DNMT1-224ENST00000591764 COL4A1P02462 1669 aa10.53□□□□□ -0.72
DNMT1-224ENST00000591764 UBE2Q2LH0YL09 131 aa10.52□□□□□ -0.73
DNMT1-224ENST00000591764 GPR25O00155 361 aa10.52□□□□□ -0.73
DNMT1-224ENST00000591764 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
DNMT1-224ENST00000591764 SMPD1P17405 629 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms