RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 RBM5P52756 815 aaKnown RBP eCLIP11.91□□□□□ -0.5
BRCA1-226ENST00000591534 TNFAIP1Q13829 316 aa11.91□□□□□ -0.5
BRCA1-226ENST00000591534 PRKG1Q13976 671 aa11.91□□□□□ -0.5
BRCA1-226ENST00000591534 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
BRCA1-226ENST00000591534 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-226ENST00000591534 LDHAL6AQ6ZMR3 332 aa11.91□□□□□ -0.5
BRCA1-226ENST00000591534 ZBED3Q96IU2 234 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-226ENST00000591534 CNNM1Q9NRU3 951 aa11.91□□□□□ -0.5
BRCA1-226ENST00000591534 C9orf78Q9NZ63 289 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-226ENST00000591534 TAF5LO75529 589 aa11.9□□□□□ -0.5
BRCA1-226ENST00000591534 KLRK1P26718 216 aa11.9□□□□□ -0.5
BRCA1-226ENST00000591534 MAP3K11Q16584 847 aa11.9□□□□□ -0.5
BRCA1-226ENST00000591534 LMBR1LQ6UX01 489 aa11.9□□□□□ -0.5
BRCA1-226ENST00000591534 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.5
BRCA1-226ENST00000591534 ZNF454Q8N9F8 522 aa11.9□□□□□ -0.5
BRCA1-226ENST00000591534 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
BRCA1-226ENST00000591534 POLR2AP24928 1970 aaKnown RBP11.9□□□□□ -0.5
BRCA1-226ENST00000591534 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-226ENST00000591534 GRM8O00222 908 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 ST18O60284 1047 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 FOSBP53539 338 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 FOXO4P98177 505 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 EXOSC9Q06265 439 aaKnown RBP11.89□□□□□ -0.51
BRCA1-226ENST00000591534 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 BEND3Q5T5X7 828 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-226ENST00000591534 FAM117AQ9C073 453 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 VEZTQ9HBM0 779 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 AKAP11Q9UKA4 1901 aa11.89□□□□□ -0.51
BRCA1-226ENST00000591534 PSME4Q14997 1843 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 PLIN1O60240 522 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 WDHD1O75717 1129 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-226ENST00000591534 UBE4AQ14139 1066 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 ARHGEF6Q15052 776 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 PRPF38BQ5VTL8 546 aaKnown RBP11.88□□□□□ -0.51
BRCA1-226ENST00000591534 INTS3Q68E01 1043 aaKnown RBP11.88□□□□□ -0.51
BRCA1-226ENST00000591534 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 VPS37DQ86XT2 251 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 ANKRD13AQ8IZ07 590 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 SERPINA10Q9UK55 444 aa11.88□□□□□ -0.51
BRCA1-226ENST00000591534 HIBADHP31937 336 aaKnown RBP11.87□□□□□ -0.51
BRCA1-226ENST00000591534 TNNI2P48788 182 aa11.87□□□□□ -0.51
BRCA1-226ENST00000591534 AMHR2Q16671 573 aa11.87□□□□□ -0.51
BRCA1-226ENST00000591534 CERS5Q8N5B7 392 aa11.87□□□□□ -0.51
BRCA1-226ENST00000591534 ERO1AQ96HE7 468 aa11.87□□□□□ -0.51
BRCA1-226ENST00000591534 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
BRCA1-226ENST00000591534 FAM205AQ6ZU69 1335 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 F6X3S4 739 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 FRAT2O75474 233 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-226ENST00000591534 RASA3Q14644 834 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 CAVIN4Q5BKX8 364 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 MFSD14BQ5SR56 506 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 SLC4A10Q6U841 1118 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 WNK4Q96J92 1243 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 PRMT6Q96LA8 375 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-226ENST00000591534 MYH3P11055 1940 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
BRCA1-226ENST00000591534 SNAP23O00161 211 aa11.85□□□□□ -0.51
BRCA1-226ENST00000591534 TBC1D22AQ8WUA7 517 aa11.85□□□□□ -0.51
BRCA1-226ENST00000591534 ZDHHC16Q969W1 377 aa11.85□□□□□ -0.51
BRCA1-226ENST00000591534 HOOK2Q96ED9 719 aa11.85□□□□□ -0.51
BRCA1-226ENST00000591534 ADAM33Q9BZ11 813 aa11.85□□□□□ -0.51
BRCA1-226ENST00000591534 TTF2Q9UNY4 1162 aaKnown RBP11.85□□□□□ -0.51
BRCA1-226ENST00000591534 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
BRCA1-226ENST00000591534 NBPF12Q5TAG4 269 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-226ENST00000591534 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
BRCA1-226ENST00000591534 TDRD7Q8NHU6 1098 aaKnown RBP11.84□□□□□ -0.51
BRCA1-226ENST00000591534 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
BRCA1-226ENST00000591534 ZNF594Q96JF6 807 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-226ENST00000591534 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
BRCA1-226ENST00000591534 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
BRCA1-226ENST00000591534 CSADQ9Y600 493 aa11.84□□□□□ -0.51
BRCA1-226ENST00000591534 USP2O75604 605 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-226ENST00000591534 HDLBPQ00341 1268 aaKnown RBP11.83□□□□□ -0.52
BRCA1-226ENST00000591534 DZIP1LQ8IYY4 767 aaKnown RBP11.83□□□□□ -0.52
BRCA1-226ENST00000591534 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
BRCA1-226ENST00000591534 PHOX2BQ99453 314 aa11.83□□□□□ -0.52
BRCA1-226ENST00000591534 ZNF70Q9UC06 446 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-226ENST00000591534 LHX6Q9UPM6 363 aa11.83□□□□□ -0.52
BRCA1-226ENST00000591534 JAG2Q9Y219 1238 aa11.83□□□□□ -0.52
BRCA1-226ENST00000591534 TNRC18O15417 2968 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-226ENST00000591534 GYG1P46976 350 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 GTF2A2P52657 109 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 SP3Q02447 781 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 METTL24Q5JXM2 366 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 EPHA10Q5JZY3 1008 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 OTOP1Q7RTM1 612 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 OPTNQ96CV9 577 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 FAM84BQ96KN1 310 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-226ENST00000591534 TDRD3Q9H7E2 651 aaKnown RBP11.82□□□□□ -0.52
BRCA1-226ENST00000591534 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 MAST3O60307 1309 aa11.82□□□□□ -0.52
BRCA1-226ENST00000591534 IGF2BP3O00425 579 aaKnown RBP eCLIP11.81□□□□□ -0.52
BRCA1-226ENST00000591534 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms