RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZFRQ96KR1 1074 aaKnown RBP7.95□□□□□ -1.14
VPS4B-205ENST00000591383 NBPF3Q9H094 633 aa7.95□□□□□ -1.14
VPS4B-205ENST00000591383 CHMP4BQ9H444 224 aaKnown RBP7.95□□□□□ -1.14
VPS4B-205ENST00000591383 CNNM1Q9NRU3 951 aa7.95□□□□□ -1.14
VPS4B-205ENST00000591383 CHD4Q14839 1912 aa7.95□□□□□ -1.14
VPS4B-205ENST00000591383 MYH13Q9UKX3 1938 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 ZBBXA8MT70 800 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 UFL1O94874 794 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 NEFLP07196 543 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 CSF1RP07333 972 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 KCNJ4P48050 445 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 RPS8P62241 208 aaKnown RBP7.94□□□□□ -1.14
VPS4B-205ENST00000591383 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
VPS4B-205ENST00000591383 DPP8Q6V1X1 898 aaPredicted RBP7.94□□□□□ -1.14
VPS4B-205ENST00000591383 TMC4Q7Z404 712 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 TAOK3Q9H2K8 898 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 ANKIB1Q9P2G1 1089 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 PA2G4Q9UQ80 394 aaKnown RBP7.94□□□□□ -1.14
VPS4B-205ENST00000591383 ATP6V0A2Q9Y487 856 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 SNED1Q8TER0 1413 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 SBF1O95248 1867 aa7.94□□□□□ -1.14
VPS4B-205ENST00000591383 DICER1Q9UPY3 1922 aaKnown RBP7.93□□□□□ -1.14
VPS4B-205ENST00000591383 NFKBIEO00221 500 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 ZBTB7BO15156 539 aaPredicted RBP7.93□□□□□ -1.14
VPS4B-205ENST00000591383 GRIN3BO60391 1043 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 BBOX1O75936 387 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 PBX2P40425 430 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 RBM25P49756 843 aaKnown RBP7.93□□□□□ -1.14
VPS4B-205ENST00000591383 METTL24Q5JXM2 366 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 CEP85Q6P2H3 762 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 LDHAL6AQ6ZMR3 332 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 RNF19BQ6ZMZ0 732 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 EXOC6Q8TAG9 804 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 GPR101Q96P66 508 aaPredicted RBP7.93□□□□□ -1.14
VPS4B-205ENST00000591383 ZBTB40Q9NUA8 1239 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 XDHP47989 1333 aa7.93□□□□□ -1.14
VPS4B-205ENST00000591383 PNMA6EA0A0J9YXQ4 647 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 HMMRO75330 724 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 GPSM2P81274 684 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 FKBP4Q02790 459 aaKnown RBP eCLIP7.92□□□□□ -1.14
VPS4B-205ENST00000591383 CHRNDQ07001 517 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 MTX1Q13505 466 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 ELOAQ14241 798 aaKnown RBP7.92□□□□□ -1.14
VPS4B-205ENST00000591383 BLOC1S3Q6QNY0 202 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 USB1Q9BQ65 265 aaKnown RBP7.92□□□□□ -1.14
VPS4B-205ENST00000591383 PUS3Q9BZE2 481 aaKnown RBP7.92□□□□□ -1.14
VPS4B-205ENST00000591383 BCL11AQ9H165 835 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 ZNF277Q9NRM2 450 aaPredicted RBP7.92□□□□□ -1.14
VPS4B-205ENST00000591383 RNF181Q9P0P0 153 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 FKBPLQ9UIM3 349 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 GGA1Q9UJY5 639 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 NSFL1CQ9UNZ2 370 aaKnown RBP7.92□□□□□ -1.14
VPS4B-205ENST00000591383 ZNF609O15014 1411 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 COL4A5P29400 1685 aa7.92□□□□□ -1.14
VPS4B-205ENST00000591383 PPIP5K2O43314 1243 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 F12P00748 615 aaPredicted RBP7.91□□□□□ -1.14
VPS4B-205ENST00000591383 RFX5P48382 616 aaPredicted RBP7.91□□□□□ -1.14
VPS4B-205ENST00000591383 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
VPS4B-205ENST00000591383 LRRC24Q50LG9 513 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 CC2D2BQ6DHV5 1058 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 SND1Q7KZF4 910 aaKnown RBP eCLIP7.91□□□□□ -1.14
VPS4B-205ENST00000591383 SP8Q8IXZ3 490 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 RTKN2Q8IZC4 609 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 MPNDQ8N594 471 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 C7orf43Q8WVR3 580 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 BSDC1Q9NW68 430 aaPredicted RBP7.91□□□□□ -1.14
VPS4B-205ENST00000591383 ZMIZ1Q9ULJ6 1067 aa7.91□□□□□ -1.14
VPS4B-205ENST00000591383 PSME4Q14997 1843 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 MED23Q9ULK4 1368 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 MROH5Q6ZUA9 1318 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 LTBP3Q9NS15 1303 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 EYA2O00167 538 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 TAF5LO75529 589 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 IARSP41252 1262 aaKnown RBP7.9□□□□□ -1.14
VPS4B-205ENST00000591383 AOC3Q16853 763 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 TMEM164Q5U3C3 297 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 LARGE2Q8N3Y3 721 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 SUPT20HQ8NEM7 779 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 LRCH3Q96II8 777 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 PSMD1Q99460 953 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 ANKRD2Q9GZV1 360 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 MINPP1Q9UNW1 487 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 GNEQ9Y223 722 aaKnown RBP7.9□□□□□ -1.14
VPS4B-205ENST00000591383 EXOC6BQ9Y2D4 811 aa7.9□□□□□ -1.14
VPS4B-205ENST00000591383 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
VPS4B-205ENST00000591383 USP17L3A6NCW0 530 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 USP17L4A6NCW7 530 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 SNAP23O00161 211 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 SURF6O75683 361 aaKnown RBP7.89□□□□□ -1.15
VPS4B-205ENST00000591383 CIAO1O76071 339 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 SKIP12755 728 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 LMNB1P20700 586 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 ATP2B4P23634 1241 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 KLRK1P26718 216 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 IL15P40933 162 aaPredicted RBP7.89□□□□□ -1.15
VPS4B-205ENST00000591383 ATP8B2P98198 1209 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 G3BP1Q13283 466 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS4B-205ENST00000591383 PUM3Q15397 648 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms