RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
TPM4-213ENST00000591226 INCENPQ9NQS7 918 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 SLC4A4Q9Y6R1 1079 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 CHD4Q14839 1912 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 TRIM37O94972 964 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 CTDSPL2Q05D32 466 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 RESTQ13127 1097 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 KRT27Q7Z3Y8 459 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 FBXO33Q7Z6M2 555 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 CACNA1SQ13698 1873 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 TTC6Q86TZ1 520 aa13.28□□□□□ -0.28
TPM4-213ENST00000591226 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.28
TPM4-213ENST00000591226 GNAT2P19087 354 aa13.27□□□□□ -0.28
TPM4-213ENST00000591226 TDO2P48775 406 aa13.27□□□□□ -0.28
TPM4-213ENST00000591226 RBSNQ9H1K0 784 aa13.27□□□□□ -0.28
TPM4-213ENST00000591226 TACC3Q9Y6A5 838 aa13.27□□□□□ -0.28
TPM4-213ENST00000591226 MYH13Q9UKX3 1938 aa13.27□□□□□ -0.28
TPM4-213ENST00000591226 GYS1P13807 737 aa13.27□□□□□ -0.29
TPM4-213ENST00000591226 NASPP49321 788 aaPredicted RBP13.27□□□□□ -0.29
TPM4-213ENST00000591226 TFIP11Q9UBB9 837 aaKnown RBP13.27□□□□□ -0.29
TPM4-213ENST00000591226 ANGEL1Q9UNK9 670 aaKnown RBP13.27□□□□□ -0.29
TPM4-213ENST00000591226 SH2B2O14492 632 aaPredicted RBP13.26□□□□□ -0.29
TPM4-213ENST00000591226 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 NAA16Q6N069 864 aaPredicted RBP13.26□□□□□ -0.29
TPM4-213ENST00000591226 NACAP1Q9BZK3 213 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 MAGEB6P1A0A0J9YX57 407 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 FDPSP14324 419 aaKnown RBP13.26□□□□□ -0.29
TPM4-213ENST00000591226 HIBADHP31937 336 aaKnown RBP13.26□□□□□ -0.29
TPM4-213ENST00000591226 ZNF384Q8TF68 577 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 SENP2Q9HC62 589 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 SEMA3EO15041 775 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 GRAPQ13588 217 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 CCDC183Q5T5S1 534 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 TXNRD3Q86VQ6 643 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 GRAPLQ8TC17 118 aaPredicted RBP13.26□□□□□ -0.29
TPM4-213ENST00000591226 SDR42E1Q8WUS8 393 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 CHMP4CQ96CF2 233 aa13.26□□□□□ -0.29
TPM4-213ENST00000591226 GUCY1B3Q02153 619 aa13.25□□□□□ -0.29
TPM4-213ENST00000591226 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
TPM4-213ENST00000591226 RIOK1Q9BRS2 568 aaKnown RBP13.25□□□□□ -0.29
TPM4-213ENST00000591226 ELP1O95163 1332 aa13.25□□□□□ -0.29
TPM4-213ENST00000591226 IRS2Q9Y4H2 1338 aa13.25□□□□□ -0.29
TPM4-213ENST00000591226 KDM4AO75164 1064 aa13.25□□□□□ -0.29
TPM4-213ENST00000591226 DYNLL1P63167 89 aaKnown RBP13.25□□□□□ -0.29
TPM4-213ENST00000591226 SPATA32Q96LK8 384 aa13.25□□□□□ -0.29
TPM4-213ENST00000591226 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
TPM4-213ENST00000591226 ZSCAN16Q9H4T2 348 aaPredicted RBP13.25□□□□□ -0.29
TPM4-213ENST00000591226 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
TPM4-213ENST00000591226 CHAF1AQ13111 956 aaPredicted RBP13.24□□□□□ -0.29
TPM4-213ENST00000591226 MFSD6Q6ZSS7 791 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 LEO1Q8WVC0 666 aaPredicted RBP13.24□□□□□ -0.29
TPM4-213ENST00000591226 TMEM87BQ96K49 555 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 ZSWIM5Q9P217 1185 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 MYH15Q9Y2K3 1946 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 PDS5AQ29RF7 1337 aaKnown RBP13.24□□□□□ -0.29
TPM4-213ENST00000591226 CPLX1O14810 134 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 RXRAP19793 462 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 TMEM67Q5HYA8 995 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 STAG1Q8WVM7 1258 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 CNNM2Q9H8M5 875 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 LY9Q9HBG7 655 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 JAG2Q9Y219 1238 aa13.24□□□□□ -0.29
TPM4-213ENST00000591226 SERPINB2P05120 415 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
TPM4-213ENST00000591226 APOA5Q6Q788 366 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 KRT23Q9C075 422 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
TPM4-213ENST00000591226 PRDM4Q9UKN5 801 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 METAP2P50579 478 aaKnown RBP eCLIP13.23□□□□□ -0.29
TPM4-213ENST00000591226 MECOMQ03112 1051 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 PPARAQ07869 468 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 PROM2Q8N271 834 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 RPGRQ92834 1020 aaKnown RBP13.23□□□□□ -0.29
TPM4-213ENST00000591226 NSUN4Q96CB9 384 aaKnown RBP13.23□□□□□ -0.29
TPM4-213ENST00000591226 TSPY26PQ9H489 355 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 TOMM22Q9NS69 142 aa13.23□□□□□ -0.29
TPM4-213ENST00000591226 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
TPM4-213ENST00000591226 IFIT3O14879 490 aaKnown RBP13.22□□□□□ -0.29
TPM4-213ENST00000591226 PRDX5P30044 214 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 TXNRD1Q16881 649 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 OTUD7BQ6GQQ9 843 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 MICU3Q86XE3 530 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 BAZ2AQ9UIF9 1905 aaKnown RBP13.22□□□□□ -0.29
TPM4-213ENST00000591226 MINDY4BA8MYZ0 360 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 CDK11BP21127 795 aaKnown RBP13.22□□□□□ -0.29
TPM4-213ENST00000591226 ADD1P35611 737 aaKnown RBP13.22□□□□□ -0.29
TPM4-213ENST00000591226 ST5P78524 1137 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 DDR1Q08345 913 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 SGMS1Q86VZ5 419 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms