RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 CWF19L2Q2TBE0 894 aaKnown RBP17.12■□□□□ 0.33
LSM12-203ENST00000590563 MFSD14BQ5SR56 506 aa17.12■□□□□ 0.33
LSM12-203ENST00000590563 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
LSM12-203ENST00000590563 PARK7Q99497 189 aaKnown RBP17.12■□□□□ 0.33
LSM12-203ENST00000590563 NEURL1BA8MQ27 555 aa17.11■□□□□ 0.33
LSM12-203ENST00000590563 CASP7P55210 303 aa17.11■□□□□ 0.33
LSM12-203ENST00000590563 RPAP1Q9BWH6 1393 aaPredicted RBP17.11■□□□□ 0.33
LSM12-203ENST00000590563 NBPF3Q9H094 633 aa17.1■□□□□ 0.33
LSM12-203ENST00000590563 PFASO15067 1338 aa17.1■□□□□ 0.33
LSM12-203ENST00000590563 TDRD7Q8NHU6 1098 aaKnown RBP17.09■□□□□ 0.33
LSM12-203ENST00000590563 MAFAQ8NHW3 353 aaPredicted RBP17.09■□□□□ 0.33
LSM12-203ENST00000590563 C11orf49Q9H6J7 331 aa17.09■□□□□ 0.33
LSM12-203ENST00000590563 PRUNE2Q8WUY3 3088 aa17.09■□□□□ 0.33
LSM12-203ENST00000590563 PI4KAP2A4QPH2 592 aa17.08■□□□□ 0.32
LSM12-203ENST00000590563 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
LSM12-203ENST00000590563 ZNF853P0CG23 659 aa17.08■□□□□ 0.32
LSM12-203ENST00000590563 PLA2G5P39877 138 aa17.08■□□□□ 0.32
LSM12-203ENST00000590563 KSR2Q6VAB6 950 aa17.08■□□□□ 0.32
LSM12-203ENST00000590563 PI4KAP1Q8N8J0 262 aa17.08■□□□□ 0.32
LSM12-203ENST00000590563 CDX2Q99626 313 aaPredicted RBP17.08■□□□□ 0.32
LSM12-203ENST00000590563 ZNF112Q9UJU3 913 aa17.08■□□□□ 0.32
LSM12-203ENST00000590563 TNPO2O14787 897 aaKnown RBP17.07■□□□□ 0.32
LSM12-203ENST00000590563 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
LSM12-203ENST00000590563 CCDC146Q8IYE0 955 aa17.07■□□□□ 0.32
LSM12-203ENST00000590563 ZNF341Q9BYN7 854 aa17.07■□□□□ 0.32
LSM12-203ENST00000590563 ELL2O00472 640 aaPredicted RBP17.06■□□□□ 0.32
LSM12-203ENST00000590563 MDM2Q00987 491 aaPredicted RBP17.06■□□□□ 0.32
LSM12-203ENST00000590563 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
LSM12-203ENST00000590563 MIGA2Q7L4E1 593 aa17.06■□□□□ 0.32
LSM12-203ENST00000590563 TRIM32Q13049 653 aa17.05■□□□□ 0.32
LSM12-203ENST00000590563 NOL9Q5SY16 702 aaKnown RBP17.05■□□□□ 0.32
LSM12-203ENST00000590563 ZNF697Q5TEC3 545 aa17.05■□□□□ 0.32
LSM12-203ENST00000590563 OGDHLQ9ULD0 1010 aa17.05■□□□□ 0.32
LSM12-203ENST00000590563 CDH23Q9H251 3354 aa17.04■□□□□ 0.32
LSM12-203ENST00000590563 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
LSM12-203ENST00000590563 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
LSM12-203ENST00000590563 HOOK2Q96ED9 719 aa17.04■□□□□ 0.32
LSM12-203ENST00000590563 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
LSM12-203ENST00000590563 COL6A1P12109 1028 aa17.03■□□□□ 0.32
LSM12-203ENST00000590563 GYG1P46976 350 aa17.03■□□□□ 0.32
LSM12-203ENST00000590563 NEXNQ0ZGT2 675 aa17.03■□□□□ 0.32
LSM12-203ENST00000590563 GCKRQ14397 625 aa17.03■□□□□ 0.32
LSM12-203ENST00000590563 APOBEC3HQ6NTF7 200 aaKnown RBP17.03■□□□□ 0.32
LSM12-203ENST00000590563 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
LSM12-203ENST00000590563 SYMPKQ92797 1274 aaKnown RBP17.03■□□□□ 0.32
LSM12-203ENST00000590563 LAMA2P24043 3122 aaKnown RBP17.02■□□□□ 0.32
LSM12-203ENST00000590563 A0A0G2JLL6 359 aaPredicted RBP17.02■□□□□ 0.32
LSM12-203ENST00000590563 TNFRSF10AO00220 468 aa17.02■□□□□ 0.32
LSM12-203ENST00000590563 CXCL11O14625 94 aa17.02■□□□□ 0.32
LSM12-203ENST00000590563 HMGCRP04035 888 aa17.02■□□□□ 0.32
LSM12-203ENST00000590563 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
LSM12-203ENST00000590563 LRRC26Q2I0M4 334 aa17.02■□□□□ 0.32
LSM12-203ENST00000590563 PRRT2Q7Z6L0 340 aaPredicted RBP17.02■□□□□ 0.32
LSM12-203ENST00000590563 MYLIPQ8WY64 445 aa17.02■□□□□ 0.32
LSM12-203ENST00000590563 FAM84BQ96KN1 310 aaPredicted RBP17.02■□□□□ 0.32
LSM12-203ENST00000590563 ZDHHC15Q96MV8 337 aa17.02■□□□□ 0.32
LSM12-203ENST00000590563 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
LSM12-203ENST00000590563 TEKT1Q969V4 418 aa17.01■□□□□ 0.31
LSM12-203ENST00000590563 SEMA6BQ9H3T3 888 aa17.01■□□□□ 0.31
LSM12-203ENST00000590563 SLC45A1Q9Y2W3 748 aa17.01■□□□□ 0.31
LSM12-203ENST00000590563 MAST2Q6P0Q8 1798 aa17■□□□□ 0.31
LSM12-203ENST00000590563 FOXO4P98177 505 aa17■□□□□ 0.31
LSM12-203ENST00000590563 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
LSM12-203ENST00000590563 TTC28Q96AY4 2481 aa17■□□□□ 0.31
LSM12-203ENST00000590563 COA7Q96BR5 231 aa17■□□□□ 0.31
LSM12-203ENST00000590563 TTYH1Q9H313 450 aaPredicted RBP17■□□□□ 0.31
LSM12-203ENST00000590563 HMX1Q9NP08 348 aaPredicted RBP17■□□□□ 0.31
LSM12-203ENST00000590563 PLIN1O60240 522 aa16.99■□□□□ 0.31
LSM12-203ENST00000590563 HIBADHP31937 336 aaKnown RBP16.99■□□□□ 0.31
LSM12-203ENST00000590563 FAM122AQ96E09 287 aa16.99■□□□□ 0.31
LSM12-203ENST00000590563 ZNF594Q96JF6 807 aaPredicted RBP16.99■□□□□ 0.31
LSM12-203ENST00000590563 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
LSM12-203ENST00000590563 ATRNL1Q5VV63 1379 aa16.99■□□□□ 0.31
LSM12-203ENST00000590563 IFIT5Q13325 482 aaKnown RBP16.98■□□□□ 0.31
LSM12-203ENST00000590563 MAP3K21Q5TCX8 1036 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 G2E3Q7L622 706 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 ANKRD13CQ8N6S4 541 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 RUNDC1Q96C34 613 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 IFT57Q9NWB7 429 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 GJD2Q9UKL4 321 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 PLXNB2O15031 1838 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 LTBP2Q14767 1821 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 PTPRFP10586 1907 aa16.98■□□□□ 0.31
LSM12-203ENST00000590563 TJAP1Q5JTD0 557 aa16.97■□□□□ 0.31
LSM12-203ENST00000590563 GADL1Q6ZQY3 521 aa16.97■□□□□ 0.31
LSM12-203ENST00000590563 FASTKD5Q7L8L6 764 aaKnown RBP16.97■□□□□ 0.31
LSM12-203ENST00000590563 FAM151AQ8WW52 585 aa16.97■□□□□ 0.31
LSM12-203ENST00000590563 TRIB2Q92519 343 aa16.97■□□□□ 0.31
LSM12-203ENST00000590563 IQSEC3Q9UPP2 1182 aaPredicted RBP16.97■□□□□ 0.31
LSM12-203ENST00000590563 DOCK3Q8IZD9 2030 aa16.97■□□□□ 0.31
LSM12-203ENST00000590563 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
LSM12-203ENST00000590563 FAM110CQ1W6H9 321 aa16.96■□□□□ 0.31
LSM12-203ENST00000590563 USP38Q8NB14 1042 aa16.96■□□□□ 0.31
LSM12-203ENST00000590563 SMCR8Q8TEV9 937 aaPredicted RBP16.96■□□□□ 0.31
LSM12-203ENST00000590563 MRIQ9BWK5 157 aa16.96■□□□□ 0.31
LSM12-203ENST00000590563 AFG3L2Q9Y4W6 797 aa16.96■□□□□ 0.31
LSM12-203ENST00000590563 PHF20L1A8MW92 1017 aa16.95■□□□□ 0.3
LSM12-203ENST00000590563 FOSL2P15408 326 aa16.95■□□□□ 0.3
LSM12-203ENST00000590563 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms