RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, human

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF397-208	ENST00000590470	EIF6	P56537	245 aa	Known RBP	11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	HAND2	P61296	217 aa		11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	GSTO1	P78417	241 aa		11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	RBM26	Q5T8P6	1007 aa	Known RBP	11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	SRCAP	Q6ZRS2	3230 aa		11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	MAP4K1	Q92918	833 aa		11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	GML	Q99445	158 aa		11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	INCENP	Q9NQS7	918 aa		11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	SCAF8	Q9UPN6	1271 aa	Known RBP	11.22	□□□□□ -0.61
ZNF397-208	ENST00000590470	MYH1	P12882	1939 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	LAMB1	P07942	1786 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	SLC27A2	O14975	620 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	DDN	O94850	711 aa	Predicted RBP	11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	LDHC	P07864	332 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	CYP2D6	P10635	497 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	HSPA4	P34932	840 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	CFAP100	Q494V2	611 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	CREB3L3	Q68CJ9	461 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	MAPKAPK5	Q8IW41	473 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	IFNL3	Q8IZI9	196 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	TGFBRAP1	Q8WUH2	860 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	TEKT1	Q969V4	418 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	PRMT6	Q96LA8	375 aa	Predicted RBP	11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	KIF2C	Q99661	725 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	USP40	Q9NVE5	1235 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	SAP30BP	Q9UHR5	308 aa	Known RBP	11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	SNX14	Q9Y5W7	946 aa		11.21	□□□□□ -0.61
ZNF397-208	ENST00000590470	GAK	O14976	1311 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	GPR75-ASB3	A0A0A6YYF3	556 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	PATL2	C9JE40	543 aa	Known RBP	11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	FGA	P02671	866 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	TDO2	P48775	406 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	FKBP1A	P62942	108 aa	Known RBP	11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	CTDSPL2	Q05D32	466 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	PICALM	Q13492	652 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	NECTIN1	Q15223	517 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	ADCK5	Q3MIX3	580 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	CDC42EP5	Q6NZY7	148 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	TEX11	Q8IYF3	940 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	NKX2-3	Q8TAU0	364 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	NOL10	Q9BSC4	688 aa	Known RBP	11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	DSCC1	Q9BVC3	393 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	TDRD3	Q9H7E2	651 aa	Known RBP	11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	TACC3	Q9Y6A5	838 aa		11.2	□□□□□ -0.62
ZNF397-208	ENST00000590470	ASTN2	O75129	1339 aa	Predicted RBP	11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	DDX60L	Q5H9U9	1706 aa	Known RBP	11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	CLRN2	A0PK11	232 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	MINDY4B	A8MYZ0	360 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	CYP21A2	P08686	494 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	USP17L8	P0C7I0	530 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	SLURP2	P0DP57	97 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	USP5	P45974	858 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	RBM25	P49756	843 aa	Known RBP	11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	RHBDL3	P58872	404 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	TNIP1	Q15025	636 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	STOX1	Q6ZVD7	989 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	SAMD7	Q7Z3H4	446 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	MICALL2	Q8IY33	904 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	NBPF3	Q9H094	633 aa		11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	DDX4	Q9NQI0	724 aa	Known RBP	11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470		U3KPZ7	1027 aa	Predicted RBP	11.19	□□□□□ -0.62
ZNF397-208	ENST00000590470	MYO3B	Q8WXR4	1341 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	BAG3	O95817	575 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	PPP4C	P60510	307 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	NFIA	Q12857	509 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	NBPF9	Q3BBW0	867 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	HHIPL2	Q6UWX4	724 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	TICAM2	Q86XR7	235 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	ZFPM1	Q8IX07	1006 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	SLF2	Q8IX21	1173 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	AGBL3	Q8NEM8	1001 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	FAM163A	Q96GL9	167 aa	Predicted RBP	11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	TCEANC2	Q96MN5	208 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	ZDHHC15	Q96MV8	337 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	UPF3B	Q9BZI7	483 aa	Known RBP	11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	NAPB	Q9H115	298 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	CNOT7	Q9UIV1	285 aa	Known RBP	11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	SUGT1	Q9Y2Z0	365 aa		11.18	□□□□□ -0.62
ZNF397-208	ENST00000590470	USP17L12	C9JPN9	530 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	USP17L21	D6R901	530 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	WDHD1	O75717	1129 aa	Predicted RBP	11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	MCC	P23508	829 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	EPS15	P42566	896 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	TCP10	Q12799	353 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	DLGAP5	Q15398	846 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	CTR9	Q6PD62	1173 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	NOL8	Q76FK4	1167 aa	Known RBP	11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	TBC1D10C	Q8IV04	446 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	JAKMIP1	Q96N16	626 aa	Known RBP	11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	LARP6	Q9BRS8	491 aa	Known RBP	11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	MYOZ2	Q9NPC6	264 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	MCM9	Q9NXL9	1143 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	SERPINA10	Q9UK55	444 aa		11.17	□□□□□ -0.62
ZNF397-208	ENST00000590470	SIPA1L1	O43166	1804 aa		11.16	□□□□□ -0.62
ZNF397-208	ENST00000590470	FLT1	P17948	1338 aa		11.16	□□□□□ -0.62
ZNF397-208	ENST00000590470	UTRN	P46939	3433 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms