RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TNFAIP1Q13829 316 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 FKBP1CQ5VVH2 108 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 AACSQ86V21 672 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 ERC1Q8IUD2 1116 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 FAM163AQ96GL9 167 aaPredicted RBP22.39■■□□□ 1.17
DDX39A-212ENST00000590260 FAM198AQ9UFP1 575 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 PCDHB15Q9Y5E8 787 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 NDUFB9Q9Y6M9 179 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 ZAP70P43403 619 aa22.38■■□□□ 1.17
DDX39A-212ENST00000590260 KIF23Q02241 960 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-212ENST00000590260 TTLL12Q14166 644 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-212ENST00000590260 CCDC158Q5M9N0 1113 aa22.38■■□□□ 1.17
DDX39A-212ENST00000590260 FAM83AQ86UY5 434 aa22.38■■□□□ 1.17
DDX39A-212ENST00000590260 CCDC102AQ96A19 550 aa22.38■■□□□ 1.17
DDX39A-212ENST00000590260 CLMNQ96JQ2 1002 aa22.38■■□□□ 1.17
DDX39A-212ENST00000590260 MROH7-TTC4A0A0A0MT08 1334 aa22.37■■□□□ 1.17
DDX39A-212ENST00000590260 DOCK2Q92608 1830 aa22.37■■□□□ 1.17
DDX39A-212ENST00000590260 MAP2K1Q02750 393 aaPredicted RBP22.37■■□□□ 1.17
DDX39A-212ENST00000590260 HSP90AB4PQ58FF6 505 aa22.37■■□□□ 1.17
DDX39A-212ENST00000590260 ERICH6Q7L0X2 663 aa22.37■■□□□ 1.17
DDX39A-212ENST00000590260 DZIP1Q86YF9 867 aaKnown RBP22.37■■□□□ 1.17
DDX39A-212ENST00000590260 ZFPM1Q8IX07 1006 aa22.37■■□□□ 1.17
DDX39A-212ENST00000590260 KIF1BPQ96EK5 621 aa22.37■■□□□ 1.17
DDX39A-212ENST00000590260 CRBNQ96SW2 442 aa22.37■■□□□ 1.17
DDX39A-212ENST00000590260 PIH1D3Q9NQM4 214 aaKnown RBP22.37■■□□□ 1.17
DDX39A-212ENST00000590260 LAMB1P07942 1786 aa22.37■■□□□ 1.17
DDX39A-212ENST00000590260 RHBDL3P58872 404 aa22.36■■□□□ 1.17
DDX39A-212ENST00000590260 SUPT20HL1Q3ZLR7 823 aa22.36■■□□□ 1.17
DDX39A-212ENST00000590260 COL13A1Q5TAT6 717 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-212ENST00000590260 SPTY2D1Q68D10 685 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-212ENST00000590260 ARMC9Q7Z3E5 817 aa22.36■■□□□ 1.17
DDX39A-212ENST00000590260 USP40Q9NVE5 1235 aa22.36■■□□□ 1.17
DDX39A-212ENST00000590260 RPAP1Q9BWH6 1393 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-212ENST00000590260 RAB11FIP3O75154 756 aa22.35■■□□□ 1.17
DDX39A-212ENST00000590260 HSPA8P11142 646 aaKnown RBP22.35■■□□□ 1.17
DDX39A-212ENST00000590260 BTDP43251 543 aa22.35■■□□□ 1.17
DDX39A-212ENST00000590260 TNNI2P48788 182 aa22.35■■□□□ 1.17
DDX39A-212ENST00000590260 CSRNP1Q96S65 589 aa22.35■■□□□ 1.17
DDX39A-212ENST00000590260 DDX4Q9NQI0 724 aaKnown RBP22.35■■□□□ 1.17
DDX39A-212ENST00000590260 GPR75-ASB3A0A0A6YYF3 556 aa22.34■■□□□ 1.17
DDX39A-212ENST00000590260 WDHD1O75717 1129 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-212ENST00000590260 ADGRA1Q86SQ6 560 aa22.34■■□□□ 1.17
DDX39A-212ENST00000590260 ANTXR1Q9H6X2 564 aa22.34■■□□□ 1.17
DDX39A-212ENST00000590260 GJA5P36382 358 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 TCP10Q12799 353 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.33■■□□□ 1.17
DDX39A-212ENST00000590260 SH3BP5LQ7L8J4 393 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 FAM151AQ8WW52 585 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 IDI2Q9BXS1 227 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 DCTPP1Q9H773 170 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 TMOD2Q9NZR1 351 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 RAI14Q9P0K7 980 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 TSKSQ9UJT2 592 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 ATRNL1Q5VV63 1379 aa22.33■■□□□ 1.17
DDX39A-212ENST00000590260 PPP1R12BO60237 982 aaPredicted RBP22.32■■□□□ 1.16
DDX39A-212ENST00000590260 SMARCA5O60264 1052 aaPredicted RBP22.32■■□□□ 1.16
DDX39A-212ENST00000590260 CDK5RAP2Q96SN8 1893 aa22.32■■□□□ 1.16
DDX39A-212ENST00000590260 SLURP2P0DP57 97 aa22.31■■□□□ 1.16
DDX39A-212ENST00000590260 RGS3P49796 1198 aa22.31■■□□□ 1.16
DDX39A-212ENST00000590260 LBX1P52954 281 aa22.31■■□□□ 1.16
DDX39A-212ENST00000590260 MKRN3Q13064 507 aaKnown RBP22.31■■□□□ 1.16
DDX39A-212ENST00000590260 SPRYD7Q5W111 196 aa22.31■■□□□ 1.16
DDX39A-212ENST00000590260 CLASRPQ8N2M8 674 aaKnown RBP22.31■■□□□ 1.16
DDX39A-212ENST00000590260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.31■■□□□ 1.16
DDX39A-212ENST00000590260 LRP2BPQ9P2M1 347 aa22.31■■□□□ 1.16
DDX39A-212ENST00000590260 CTCFP49711 727 aaPredicted RBP22.3■■□□□ 1.16
DDX39A-212ENST00000590260 AIDAQ96BJ3 306 aa22.3■■□□□ 1.16
DDX39A-212ENST00000590260 IREB2P48200 963 aaKnown RBP22.29■■□□□ 1.16
DDX39A-212ENST00000590260 SLF2Q8IX21 1173 aa22.29■■□□□ 1.16
DDX39A-212ENST00000590260 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
DDX39A-212ENST00000590260 WNK4Q96J92 1243 aa22.29■■□□□ 1.16
DDX39A-212ENST00000590260 UNCXA6NJT0 531 aa22.28■■□□□ 1.16
DDX39A-212ENST00000590260 ENTPD3O75355 529 aa22.28■■□□□ 1.16
DDX39A-212ENST00000590260 MIGA2Q7L4E1 593 aa22.28■■□□□ 1.16
DDX39A-212ENST00000590260 ANKRD13AQ8IZ07 590 aa22.28■■□□□ 1.16
DDX39A-212ENST00000590260 LRRCC1Q9C099 1032 aa22.28■■□□□ 1.16
DDX39A-212ENST00000590260 BCL11AQ9H165 835 aa22.28■■□□□ 1.16
DDX39A-212ENST00000590260 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.28■■□□□ 1.16
DDX39A-212ENST00000590260 FOCADQ5VW36 1801 aa22.28■■□□□ 1.16
DDX39A-212ENST00000590260 SIPA1L1O43166 1804 aa22.27■■□□□ 1.16
DDX39A-212ENST00000590260 DDTLA6NHG4 134 aaPredicted RBP22.27■■□□□ 1.16
DDX39A-212ENST00000590260 IFIT2P09913 472 aaKnown RBP22.27■■□□□ 1.16
DDX39A-212ENST00000590260 GSTO1P78417 241 aa22.27■■□□□ 1.16
DDX39A-212ENST00000590260 VGLL4Q14135 290 aa22.27■■□□□ 1.16
DDX39A-212ENST00000590260 NAA16Q6N069 864 aaPredicted RBP22.27■■□□□ 1.16
DDX39A-212ENST00000590260 SLC10A4Q96EP9 437 aa22.27■■□□□ 1.16
DDX39A-212ENST00000590260 EDC3Q96F86 508 aaKnown RBP22.27■■□□□ 1.16
DDX39A-212ENST00000590260 ELP3Q9H9T3 547 aa22.27■■□□□ 1.16
DDX39A-212ENST00000590260 RNF186Q9NXI6 227 aa22.27■■□□□ 1.16
DDX39A-212ENST00000590260 LDHCP07864 332 aa22.26■■□□□ 1.15
DDX39A-212ENST00000590260 TM4SF4P48230 202 aa22.26■■□□□ 1.15
DDX39A-212ENST00000590260 MAP3K9P80192 1104 aa22.26■■□□□ 1.15
DDX39A-212ENST00000590260 SH3RF3Q8TEJ3 882 aaPredicted RBP22.26■■□□□ 1.15
DDX39A-212ENST00000590260 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.26■■□□□ 1.15
DDX39A-212ENST00000590260 PRDM10Q9NQV6 1147 aa22.26■■□□□ 1.15
DDX39A-212ENST00000590260 SNCAIPQ9Y6H5 919 aa22.26■■□□□ 1.15
DDX39A-212ENST00000590260 PPP4CP60510 307 aa22.25■■□□□ 1.15
DDX39A-212ENST00000590260 PICALMQ13492 652 aa22.25■■□□□ 1.15
DDX39A-212ENST00000590260 ZKSCAN4Q969J2 545 aaPredicted RBP22.25■■□□□ 1.15
DDX39A-212ENST00000590260 AATFQ9NY61 560 aaKnown RBP eCLIP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms