RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 DYNLL1P63167 89 aaKnown RBP16.75■□□□□ 0.27
RETREG3-208ENST00000589797 CBX8Q9HC52 389 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 EPS15P42566 896 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 FOXO4P98177 505 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 ANO1Q5XXA6 986 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 ZNF287Q9HBT7 754 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 SSH2Q76I76 1423 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 MYOM1P52179 1685 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 SPATA31D1Q6ZQQ2 1576 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 SKILP12757 684 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 KIF5BP33176 963 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 UVSSAQ2YD98 709 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
RETREG3-208ENST00000589797 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 TRIM75PA6NK02 468 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 UBASH3AP57075 661 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 IFNKQ9P0W0 207 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 MROH5Q6ZUA9 1318 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 ZNF76P36508 570 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 RASGRF1Q13972 1273 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 TGFBRAP1Q8WUH2 860 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 CDCA7Q9BWT1 371 aaPredicted RBP16.74■□□□□ 0.27
RETREG3-208ENST00000589797 DACH1Q9UI36 760 aa16.74■□□□□ 0.27
RETREG3-208ENST00000589797 FSD2A1L4K1 749 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 PATL2C9JE40 543 aaKnown RBP16.73■□□□□ 0.27
RETREG3-208ENST00000589797 CLIC6Q96NY7 704 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 DENND2AQ9ULE3 1009 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 GNAT2P19087 354 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
RETREG3-208ENST00000589797 FAM160A1Q05DH4 1040 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 PTPN21Q16825 1174 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 TSC1Q92574 1164 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 ZSWIM4Q9H7M6 989 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 URI1O94763 535 aaPredicted RBP16.73■□□□□ 0.27
RETREG3-208ENST00000589797 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
RETREG3-208ENST00000589797 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
RETREG3-208ENST00000589797 ATG9AQ7Z3C6 839 aa16.72■□□□□ 0.27
RETREG3-208ENST00000589797 PFKFB2O60825 505 aa16.72■□□□□ 0.27
RETREG3-208ENST00000589797 STIM1Q13586 685 aa16.72■□□□□ 0.27
RETREG3-208ENST00000589797 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
RETREG3-208ENST00000589797 CLIC4Q9Y696 253 aa16.72■□□□□ 0.27
RETREG3-208ENST00000589797 POLR2DO15514 142 aaKnown RBP16.72■□□□□ 0.27
RETREG3-208ENST00000589797 CYP2E1P05181 493 aaPredicted RBP16.72■□□□□ 0.27
RETREG3-208ENST00000589797 ERCC3P19447 782 aa16.72■□□□□ 0.27
RETREG3-208ENST00000589797 TEX11Q8IYF3 940 aa16.72■□□□□ 0.27
RETREG3-208ENST00000589797 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
RETREG3-208ENST00000589797 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
RETREG3-208ENST00000589797 LCORLQ8N3X6 602 aa16.72■□□□□ 0.27
RETREG3-208ENST00000589797 CBFA2T2O43439 604 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 ZNF202O95125 648 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 TCP10Q12799 353 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 ZNF804AQ7Z570 1209 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 MYSM1Q5VVJ2 828 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 PIK3AP1Q6ZUJ8 805 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 LLPHQ9BRT6 129 aaKnown RBP16.71■□□□□ 0.27
RETREG3-208ENST00000589797 UBA5Q9GZZ9 404 aa16.71■□□□□ 0.27
RETREG3-208ENST00000589797 NAPAP54920 295 aa16.71■□□□□ 0.26
RETREG3-208ENST00000589797 TFAP4Q01664 338 aa16.71■□□□□ 0.26
RETREG3-208ENST00000589797 DNA2P51530 1060 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 PPARAQ07869 468 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 TTC14Q96N46 770 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 GPIHBP1Q8IV16 184 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 TRIM37O94972 964 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 LRMPQ12912 555 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
RETREG3-208ENST00000589797 EEF2KMTQ96G04 330 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 CLSTN2Q9H4D0 955 aa16.7■□□□□ 0.26
RETREG3-208ENST00000589797 CIAO1O76071 339 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 GOLGA8HP0CJ92 632 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 SKIDA1Q1XH10 827 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 STOX1Q6ZVD7 989 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 BRAPQ7Z569 592 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 ANKRD2Q9GZV1 360 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 EPB41L2O43491 1005 aaKnown RBP16.69■□□□□ 0.26
RETREG3-208ENST00000589797 ADD2P35612 726 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 ZNF654Q8IZM8 581 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 TMOD2Q9NZR1 351 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 PCDHA7Q9UN72 937 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 GTF2IP78347 998 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 RRAGBQ5VZM2 374 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 ZNF274Q96GC6 653 aaPredicted RBP16.69■□□□□ 0.26
RETREG3-208ENST00000589797 GPCPD1Q9NPB8 672 aa16.69■□□□□ 0.26
RETREG3-208ENST00000589797 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 TNKSO95271 1327 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 KRI1Q8N9T8 703 aaKnown RBP16.68■□□□□ 0.26
RETREG3-208ENST00000589797 DEF6Q9H4E7 631 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
RETREG3-208ENST00000589797 ZNF771Q7L3S4 317 aaPredicted RBP16.68■□□□□ 0.26
RETREG3-208ENST00000589797 TRMT44Q8IYL2 757 aaKnown RBP16.68■□□□□ 0.26
RETREG3-208ENST00000589797 FBXO18Q8NFZ0 1043 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms