RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 CREB3L3Q68CJ9 461 aa12.19□□□□□ -0.46
APOC1-205ENST00000589781 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
APOC1-205ENST00000589781 APPBP2Q92624 585 aa12.19□□□□□ -0.46
APOC1-205ENST00000589781 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
APOC1-205ENST00000589781 ZBED3Q96IU2 234 aaPredicted RBP12.19□□□□□ -0.46
APOC1-205ENST00000589781 FAM84BQ96KN1 310 aaPredicted RBP12.19□□□□□ -0.46
APOC1-205ENST00000589781 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
APOC1-205ENST00000589781 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.46
APOC1-205ENST00000589781 SLKQ9H2G2 1235 aaPredicted RBP12.19□□□□□ -0.46
APOC1-205ENST00000589781 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
APOC1-205ENST00000589781 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
APOC1-205ENST00000589781 TMEM88BA6NKF7 163 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 ADM5C9JUS6 153 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 H7C1D1 291 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 ST18O60284 1047 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 NEK4P51957 841 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 GTF2IP78347 998 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 NECTIN1Q15223 517 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 GRIK5Q16478 980 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 CAVIN4Q5BKX8 364 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
APOC1-205ENST00000589781 KCNB2Q92953 911 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
APOC1-205ENST00000589781 JAG2Q9Y219 1238 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 TAF6LQ9Y6J9 622 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
APOC1-205ENST00000589781 RPAP1Q9BWH6 1393 aaPredicted RBP12.18□□□□□ -0.46
APOC1-205ENST00000589781 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 TCRBV5S4A2TA0A5A2 114 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 KIF4BQ2VIQ3 1234 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 NBPF9Q3BBW0 867 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 TTLL5Q6EMB2 1281 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 ZSCAN25Q6NSZ9 544 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
APOC1-205ENST00000589781 FBXO33Q7Z6M2 555 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 USP48Q86UV5 1035 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 MAGEB6Q8N7X4 407 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 TDRD7Q8NHU6 1098 aaKnown RBP12.17□□□□□ -0.46
APOC1-205ENST00000589781 JAKMIP1Q96N16 626 aaKnown RBP12.17□□□□□ -0.46
APOC1-205ENST00000589781 PUS7LQ9H0K6 701 aaKnown RBP12.17□□□□□ -0.46
APOC1-205ENST00000589781 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
APOC1-205ENST00000589781 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
APOC1-205ENST00000589781 RASSF10A6NK89 507 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 G3V3G9 751 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 FOXP2O15409 715 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 GPAA1O43292 621 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 USP17L8P0C7I0 530 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 CPA1P15085 419 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 HIBADHP31937 336 aaKnown RBP12.16□□□□□ -0.46
APOC1-205ENST00000589781 VEGFBP49765 207 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
APOC1-205ENST00000589781 DCAF8Q5TAQ9 597 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 MYOZ2Q9NPC6 264 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 DENND2AQ9ULE3 1009 aa12.16□□□□□ -0.46
APOC1-205ENST00000589781 LAMB1P07942 1786 aa12.15□□□□□ -0.46
APOC1-205ENST00000589781 HSPD1P10809 573 aaKnown RBP12.15□□□□□ -0.46
APOC1-205ENST00000589781 CASTP20810 708 aaKnown RBP12.15□□□□□ -0.46
APOC1-205ENST00000589781 MAP3K12Q12852 859 aa12.15□□□□□ -0.46
APOC1-205ENST00000589781 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
APOC1-205ENST00000589781 KIAA0825Q8IV33 1275 aa12.15□□□□□ -0.46
APOC1-205ENST00000589781 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
APOC1-205ENST00000589781 PDS5AQ29RF7 1337 aaKnown RBP12.14□□□□□ -0.47
APOC1-205ENST00000589781 FAM205AQ6ZU69 1335 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 WNT10BO00744 389 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 SEMA3EO15041 775 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 FRAT2O75474 233 aaPredicted RBP12.14□□□□□ -0.47
APOC1-205ENST00000589781 MBD4O95243 580 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 CYP21A2P08686 494 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
APOC1-205ENST00000589781 COL9A3Q14050 684 aaPredicted RBP12.14□□□□□ -0.47
APOC1-205ENST00000589781 ANGEL2Q5VTE6 544 aaKnown RBP12.14□□□□□ -0.47
APOC1-205ENST00000589781 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 CDC37L1Q7L3B6 337 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 FBXW7Q969H0 707 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 TTC14Q96N46 770 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 LRP2BPQ9P2M1 347 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 TLL2Q9Y6L7 1015 aa12.14□□□□□ -0.47
APOC1-205ENST00000589781 NAV1Q8NEY1 1877 aa12.13□□□□□ -0.47
APOC1-205ENST00000589781 CELF2O95319 508 aaKnown RBP12.13□□□□□ -0.47
APOC1-205ENST00000589781 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
APOC1-205ENST00000589781 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
APOC1-205ENST00000589781 KRT26Q7Z3Y9 468 aa12.13□□□□□ -0.47
APOC1-205ENST00000589781 SAPCD2Q86UD0 394 aa12.13□□□□□ -0.47
APOC1-205ENST00000589781 ZIC5Q96T25 663 aa12.13□□□□□ -0.47
APOC1-205ENST00000589781 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
APOC1-205ENST00000589781 BAZ2AQ9UIF9 1905 aaKnown RBP12.13□□□□□ -0.47
APOC1-205ENST00000589781 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
APOC1-205ENST00000589781 HSP90AA1P07900 732 aaKnown RBP12.12□□□□□ -0.47
APOC1-205ENST00000589781 CYP7A1P22680 504 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 AK2P54819 239 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms