RNA–Protein interactions for RNA: ENST00000589695.1

TREM1-205, Transcript of triggering receptor expressed on myeloid cells 1, human

TSL 2

Gene TREM1, Length 519 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TREM1-205	ENST00000589695	ALDH1A1	P00352	501 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	LDHB	P07195	334 aa	Known RBP	6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	PRDX5	P30044	214 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	CACNB3	P54284	484 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	MAP3K9	P80192	1104 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	MAP3K10	Q02779	954 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	DIXDC1	Q155Q3	683 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	SP7	Q8TDD2	431 aa	Predicted RBP	6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	ZNF384	Q8TF68	577 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	FAM151A	Q8WW52	585 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	XAGE2	Q96GT9	111 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	PTPN18	Q99952	460 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	IDI2	Q9BXS1	227 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	R3HDML	Q9H3Y0	253 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	GPR108	Q9NPR9	543 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	HMG20B	Q9P0W2	317 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	FAM198A	Q9UFP1	575 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	ZNF112	Q9UJU3	913 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	DAGLA	Q9Y4D2	1042 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	ECM29	Q5VYK3	1845 aa		6.27	□□□□□ -1.41
TREM1-205	ENST00000589695	GAK	O14976	1311 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	ARAP2	Q8WZ64	1704 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	GPR75-ASB3	A0A0A6YYF3	556 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	SPDYE5	A6NIY4	337 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	GPR25	O00155	361 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	IGSF3	O75054	1194 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	ARID4A	P29374	1257 aa	Predicted RBP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	NFIA	Q12857	509 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	G3BP1	Q13283	466 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	DGKZ	Q13574	1117 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	VGLL4	Q14135	290 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	MVP	Q14764	893 aa	Known RBP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	PKN2	Q16513	984 aa	Known RBP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	CTU1	Q7Z7A3	348 aa	Known RBP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	ZGPAT	Q8N5A5	531 aa	Known RBP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	HOOK2	Q96ED9	719 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	USP40	Q9NVE5	1235 aa		6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.26	□□□□□ -1.41
TREM1-205	ENST00000589695	PHF20L1	A8MW92	1017 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	ENTPD3	O75355	529 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	WDHD1	O75717	1129 aa	Predicted RBP	6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	MAP4K4	O95819	1239 aa	Predicted RBP	6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	MECOM	Q03112	1051 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	MKRN3	Q13064	507 aa	Known RBP	6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	SH3BP5L	Q7L8J4	393 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	ZFPM1	Q8IX07	1006 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	SPATA5	Q8NB90	893 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	NSUN4	Q96CB9	384 aa	Known RBP	6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	OPTN	Q96CV9	577 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	NEUROD6	Q96NK8	337 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	ELP3	Q9H9T3	547 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	TMOD2	Q9NZR1	351 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	SNCAIP	Q9Y6H5	919 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	RFX7	Q2KHR2	1363 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	ATRNL1	Q5VV63	1379 aa		6.25	□□□□□ -1.41
TREM1-205	ENST00000589695	CASP8AP2	Q9UKL3	1982 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	LAMB1	P07942	1786 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	CCDC85C	A6NKD9	419 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	FKTN	O75072	461 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	SURF6	O75683	361 aa	Known RBP	6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	SLC34A2	O95436	690 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	UQCRFS1P1	P0C7P4	283 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	MCAM	P43121	646 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	GTF2A2	P52657	109 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	RHBDL3	P58872	404 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	PPP4C	P60510	307 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	PPAT	Q06203	517 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	TNNI3K	Q59H18	835 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	NOL9	Q5SY16	702 aa	Known RBP	6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	DCAF15	Q66K64	600 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	OTUD7B	Q6GQQ9	843 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	CEP85	Q6P2H3	762 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	PI16	Q6UXB8	463 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	TBC1D9	Q6ZT07	1266 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	MIGA2	Q7L4E1	593 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	ERO1B	Q86YB8	467 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	SLF2	Q8IX21	1173 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	FTSJ3	Q8IY81	847 aa	Known RBP	6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	PANK1	Q8TE04	598 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	BRI3BP	Q8WY22	251 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	ZKSCAN4	Q969J2	545 aa	Predicted RBP	6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	EAF2	Q96CJ1	260 aa	Predicted RBP	6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	ZNF341	Q9BYN7	854 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	ZCCHC17	Q9NP64	241 aa	Known RBP	6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	ZBTB40	Q9NUA8	1239 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	CSAD	Q9Y600	493 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	FPGT-TNNI3K	V9GXZ4	949 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	MROH7-TTC4	A0A0A0MT08	1334 aa		6.24	□□□□□ -1.41
TREM1-205	ENST00000589695	AKAP11	Q9UKA4	1901 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	IRF6	O14896	467 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	TBC1D12	O60347	775 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	CYP2E1	P05181	493 aa	Predicted RBP	6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	LDHC	P07864	332 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	MS4A1	P11836	297 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	INPP5B	P32019	993 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	BTD	P43251	543 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms