RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 RPAP2Q8IXW5 612 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-208ENST00000589216 CLMNQ96JQ2 1002 aa12.14□□□□□ -0.47
PTPN2-208ENST00000589216 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
PTPN2-208ENST00000589216 ANGEL1Q9UNK9 670 aaKnown RBP12.14□□□□□ -0.47
PTPN2-208ENST00000589216 NDUFB9Q9Y6M9 179 aa12.14□□□□□ -0.47
PTPN2-208ENST00000589216 RPAP1Q9BWH6 1393 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-208ENST00000589216 MECOMQ03112 1051 aa12.13□□□□□ -0.47
PTPN2-208ENST00000589216 NOGQ13253 232 aa12.13□□□□□ -0.47
PTPN2-208ENST00000589216 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
PTPN2-208ENST00000589216 TTC39AQ5SRH9 613 aa12.13□□□□□ -0.47
PTPN2-208ENST00000589216 LDLRAD1Q5T700 205 aa12.13□□□□□ -0.47
PTPN2-208ENST00000589216 COL13A1Q5TAT6 717 aaPredicted RBP12.13□□□□□ -0.47
PTPN2-208ENST00000589216 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
PTPN2-208ENST00000589216 RHPN1Q8TCX5 695 aa12.13□□□□□ -0.47
PTPN2-208ENST00000589216 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
PTPN2-208ENST00000589216 DDX60LQ5H9U9 1706 aaKnown RBP12.13□□□□□ -0.47
PTPN2-208ENST00000589216 MROH7-TTC4A0A0A0MT08 1334 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 MYH7P12883 1935 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 HMMRO75330 724 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 CYP2E1P05181 493 aaPredicted RBP12.12□□□□□ -0.47
PTPN2-208ENST00000589216 UQCRFS1P1P0C7P4 283 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
PTPN2-208ENST00000589216 MAP2K2P36507 400 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 ZAP70P43403 619 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
PTPN2-208ENST00000589216 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
PTPN2-208ENST00000589216 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 ZGPATQ8N5A5 531 aaKnown RBP12.12□□□□□ -0.47
PTPN2-208ENST00000589216 NSUN4Q96CB9 384 aaKnown RBP12.12□□□□□ -0.47
PTPN2-208ENST00000589216 CRBNQ96SW2 442 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 PIH1D3Q9NQM4 214 aaKnown RBP12.12□□□□□ -0.47
PTPN2-208ENST00000589216 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
PTPN2-208ENST00000589216 FAM198AQ9UFP1 575 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
PTPN2-208ENST00000589216 BTDP43251 543 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 MAP2K1Q02750 393 aaPredicted RBP12.11□□□□□ -0.47
PTPN2-208ENST00000589216 MAP3K11Q16584 847 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 ADGRA1Q86SQ6 560 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 ZFPM1Q8IX07 1006 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 DDX4Q9NQI0 724 aaKnown RBP12.11□□□□□ -0.47
PTPN2-208ENST00000589216 TMOD2Q9NZR1 351 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
PTPN2-208ENST00000589216 CASP8AP2Q9UKL3 1982 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 DOCK1Q14185 1865 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 ATAD5Q96QE3 1844 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 SMARCA5O60264 1052 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-208ENST00000589216 USP2O75604 605 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-208ENST00000589216 WDHD1O75717 1129 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-208ENST00000589216 GJA5P36382 358 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 TNNI2P48788 182 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 LBX1P52954 281 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 RHBDL3P58872 404 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 TCP10Q12799 353 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 FKBP1CQ5VVH2 108 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 ARMC9Q7Z3E5 817 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 FAM83AQ86UY5 434 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 AIDAQ96BJ3 306 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 KIF1BPQ96EK5 621 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 ZNF512BQ96KM6 892 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-208ENST00000589216 ANTXR1Q9H6X2 564 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 USP40Q9NVE5 1235 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 RAI14Q9P0K7 980 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 NAV1Q8NEY1 1877 aa12.1□□□□□ -0.47
PTPN2-208ENST00000589216 SLURP2P0DP57 97 aa12.09□□□□□ -0.47
PTPN2-208ENST00000589216 RGS3P49796 1198 aa12.09□□□□□ -0.47
PTPN2-208ENST00000589216 SUPT20HL1Q3ZLR7 823 aa12.09□□□□□ -0.47
PTPN2-208ENST00000589216 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
PTPN2-208ENST00000589216 SPTY2D1Q68D10 685 aaPredicted RBP12.09□□□□□ -0.47
PTPN2-208ENST00000589216 SH3BP5LQ7L8J4 393 aa12.09□□□□□ -0.47
PTPN2-208ENST00000589216 CHMP4BQ9H444 224 aaKnown RBP12.09□□□□□ -0.47
PTPN2-208ENST00000589216 PHIPQ8WWQ0 1821 aa12.09□□□□□ -0.47
PTPN2-208ENST00000589216 PTPRFP10586 1907 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 GPR75-ASB3A0A0A6YYF3 556 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 PPP1R12BO60237 982 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-208ENST00000589216 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-208ENST00000589216 PICALMQ13492 652 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 VGLL4Q14135 290 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 SPRYD7Q5W111 196 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-208ENST00000589216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPN2-208ENST00000589216 FAM151AQ8WW52 585 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 EDC3Q96F86 508 aaKnown RBP12.08□□□□□ -0.48
PTPN2-208ENST00000589216 FAM163AQ96GL9 167 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-208ENST00000589216 WNK4Q96J92 1243 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 CSRNP1Q96S65 589 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 ELP3Q9H9T3 547 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 LRP2BPQ9P2M1 347 aa12.08□□□□□ -0.48
PTPN2-208ENST00000589216 MYH1P12882 1939 aa12.07□□□□□ -0.48
PTPN2-208ENST00000589216 RAB11FIP3O75154 756 aa12.07□□□□□ -0.48
PTPN2-208ENST00000589216 CLASRPQ8N2M8 674 aaKnown RBP12.07□□□□□ -0.48
PTPN2-208ENST00000589216 IDI2Q9BXS1 227 aa12.07□□□□□ -0.48
PTPN2-208ENST00000589216 SNCAIPQ9Y6H5 919 aa12.07□□□□□ -0.48
PTPN2-208ENST00000589216 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
PTPN2-208ENST00000589216 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
PTPN2-208ENST00000589216 INPP5BP32019 993 aa12.06□□□□□ -0.48
PTPN2-208ENST00000589216 IREB2P48200 963 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms