RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 MRIQ9BWK5 157 aa14.26□□□□□ -0.13
RFX1-204ENST00000588885 TMOD2Q9NZR1 351 aa14.26□□□□□ -0.13
RFX1-204ENST00000588885 ABCF2Q9UG63 623 aa14.26□□□□□ -0.13
RFX1-204ENST00000588885 SEMA3EO15041 775 aa14.25□□□□□ -0.13
RFX1-204ENST00000588885 IREB2P48200 963 aaKnown RBP14.25□□□□□ -0.13
RFX1-204ENST00000588885 TNNI2P48788 182 aa14.25□□□□□ -0.13
RFX1-204ENST00000588885 IRX6P78412 446 aaPredicted RBP14.25□□□□□ -0.13
RFX1-204ENST00000588885 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
RFX1-204ENST00000588885 SPRYD7Q5W111 196 aa14.25□□□□□ -0.13
RFX1-204ENST00000588885 MCOLN1Q9GZU1 580 aa14.25□□□□□ -0.13
RFX1-204ENST00000588885 PLSCR2Q9NRY7 297 aa14.25□□□□□ -0.13
RFX1-204ENST00000588885 DAGLAQ9Y4D2 1042 aa14.25□□□□□ -0.13
RFX1-204ENST00000588885 SSC5DA1L4H1 1573 aa14.25□□□□□ -0.13
RFX1-204ENST00000588885 TBC1D8O95759 1140 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 TCP10Q12799 353 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 CDC42EP5Q6NZY7 148 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 PI16Q6UXB8 463 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 TBC1D9Q6ZT07 1266 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 SSH3Q8TE77 659 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 USP40Q9NVE5 1235 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 SAGE1Q9NXZ1 904 aa14.24□□□□□ -0.13
RFX1-204ENST00000588885 AK9Q5TCS8 1911 aa14.23□□□□□ -0.13
RFX1-204ENST00000588885 DZIP1Q86YF9 867 aaKnown RBP14.23□□□□□ -0.13
RFX1-204ENST00000588885 WNK4Q96J92 1243 aa14.23□□□□□ -0.13
RFX1-204ENST00000588885 ELP3Q9H9T3 547 aa14.23□□□□□ -0.13
RFX1-204ENST00000588885 HMG20BQ9P0W2 317 aa14.23□□□□□ -0.13
RFX1-204ENST00000588885 COG6Q9Y2V7 657 aa14.23□□□□□ -0.13
RFX1-204ENST00000588885 SALL1Q9NSC2 1324 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 ARAP2Q8WZ64 1704 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 NEFLP07196 543 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 TM4SF4P48230 202 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 NFIAQ12857 509 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 CEP85Q6P2H3 762 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 MIGA2Q7L4E1 593 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 ANKRD13AQ8IZ07 590 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 SNRKQ9NRH2 765 aa14.22□□□□□ -0.13
RFX1-204ENST00000588885 GJA5P36382 358 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 MAP3K9P80192 1104 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 SREBF2Q12772 1141 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 TNNI3KQ59H18 835 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.21□□□□□ -0.13
RFX1-204ENST00000588885 ERICH6Q7L0X2 663 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 ZGPATQ8N5A5 531 aaKnown RBP14.21□□□□□ -0.13
RFX1-204ENST00000588885 SPATA5Q8NB90 893 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 DBNDD2Q9BQY9 259 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 FPGT-TNNI3KV9GXZ4 949 aa14.21□□□□□ -0.13
RFX1-204ENST00000588885 MS4A1P11836 297 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 MLLT1Q03111 559 aaPredicted RBP14.2□□□□□ -0.14
RFX1-204ENST00000588885 MECOMQ03112 1051 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 TTC39AQ5SRH9 613 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 C20orf194Q5TEA3 1177 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 SPTY2D1Q68D10 685 aaPredicted RBP14.2□□□□□ -0.14
RFX1-204ENST00000588885 FAM83AQ86UY5 434 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 ZFPM1Q8IX07 1006 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.2□□□□□ -0.14
RFX1-204ENST00000588885 OPTNQ96CV9 577 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 CCDC8Q9H0W5 538 aaPredicted RBP14.2□□□□□ -0.14
RFX1-204ENST00000588885 R3HDMLQ9H3Y0 253 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 RAI14Q9P0K7 980 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 EXOC6BQ9Y2D4 811 aa14.2□□□□□ -0.14
RFX1-204ENST00000588885 APBB1O00213 710 aa14.19□□□□□ -0.14
RFX1-204ENST00000588885 MCAMP43121 646 aa14.19□□□□□ -0.14
RFX1-204ENST00000588885 VGLL4Q14135 290 aa14.19□□□□□ -0.14
RFX1-204ENST00000588885 FKBP1CQ5VVH2 108 aa14.19□□□□□ -0.14
RFX1-204ENST00000588885 FAM151AQ8WW52 585 aa14.19□□□□□ -0.14
RFX1-204ENST00000588885 ZKSCAN4Q969J2 545 aaPredicted RBP14.19□□□□□ -0.14
RFX1-204ENST00000588885 TLR7Q9NYK1 1049 aaKnown RBP14.19□□□□□ -0.14
RFX1-204ENST00000588885 FAM198AQ9UFP1 575 aa14.19□□□□□ -0.14
RFX1-204ENST00000588885 NOP58Q9Y2X3 529 aaKnown RBP14.19□□□□□ -0.14
RFX1-204ENST00000588885 GTF3C3Q9Y5Q9 886 aa14.19□□□□□ -0.14
RFX1-204ENST00000588885 CSADQ9Y600 493 aa14.19□□□□□ -0.14
RFX1-204ENST00000588885 MANSC4A6NHS7 340 aaPredicted RBP14.18□□□□□ -0.14
RFX1-204ENST00000588885 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 ZBTB48P10074 688 aaPredicted RBP14.18□□□□□ -0.14
RFX1-204ENST00000588885 ARID4AP29374 1257 aaPredicted RBP14.18□□□□□ -0.14
RFX1-204ENST00000588885 BTDP43251 543 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 RGS3P49796 1198 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.18□□□□□ -0.14
RFX1-204ENST00000588885 ZNF384Q8TF68 577 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 WRNIP1Q96S55 665 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 GPR108Q9NPR9 543 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 LRP2BPQ9P2M1 347 aa14.18□□□□□ -0.14
RFX1-204ENST00000588885 PDS5AQ29RF7 1337 aaKnown RBP14.17□□□□□ -0.14
RFX1-204ENST00000588885 UNCXA6NJT0 531 aa14.17□□□□□ -0.14
RFX1-204ENST00000588885 IGF2BP3O00425 579 aaKnown RBP eCLIP14.17□□□□□ -0.14
RFX1-204ENST00000588885 GABBR2O75899 941 aa14.17□□□□□ -0.14
RFX1-204ENST00000588885 PICALMQ13492 652 aa14.17□□□□□ -0.14
RFX1-204ENST00000588885 ZSCAN29Q8IWY8 852 aaPredicted RBP14.17□□□□□ -0.14
RFX1-204ENST00000588885 SLF2Q8IX21 1173 aa14.17□□□□□ -0.14
RFX1-204ENST00000588885 ZNF296Q8WUU4 475 aaPredicted RBP14.17□□□□□ -0.14
RFX1-204ENST00000588885 EAF2Q96CJ1 260 aaPredicted RBP14.17□□□□□ -0.14
RFX1-204ENST00000588885 OTUD5Q96G74 571 aa14.17□□□□□ -0.14
RFX1-204ENST00000588885 DBNLQ9UJU6 430 aaKnown RBP14.17□□□□□ -0.14
RFX1-204ENST00000588885 DDX19BQ9UMR2 479 aa14.17□□□□□ -0.14
RFX1-204ENST00000588885 GAKO14976 1311 aa14.16□□□□□ -0.14
RFX1-204ENST00000588885 GPR25O00155 361 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms