RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ST3GAL1Q11201 340 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 GRAPQ13588 217 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 SLC15A2Q16348 729 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 ZNF827Q17R98 1081 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 DNAJC5GQ8N7S2 189 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 GRAPLQ8TC17 118 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-206ENST00000588860 AIDAQ96BJ3 306 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 TMEM121BQ9BXQ6 578 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-206ENST00000588860 TFCP2L1Q9NZI6 479 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 LRP2BPQ9P2M1 347 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
SMAD4-206ENST00000588860 MBD4O95243 580 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 FGAP02671 866 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 APPP05067 770 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 KLRK1P26718 216 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 DDR1Q08345 913 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 GSE1Q14687 1217 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 MCTP1Q6DN14 999 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 DHX32Q7L7V1 743 aaKnown RBP10.38□□□□□ -0.75
SMAD4-206ENST00000588860 RBM17Q96I25 401 aaKnown RBP10.38□□□□□ -0.75
SMAD4-206ENST00000588860 STRBPQ96SI9 672 aaKnown RBP10.38□□□□□ -0.75
SMAD4-206ENST00000588860 LRRC2Q9BYS8 371 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 OCEL1Q9H607 264 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 DENND2AQ9ULE3 1009 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 MYH6P13533 1939 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 NAV1Q8NEY1 1877 aa10.38□□□□□ -0.75
SMAD4-206ENST00000588860 POLRMTO00411 1230 aaKnown RBP10.37□□□□□ -0.75
SMAD4-206ENST00000588860 ZNF213O14771 459 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 SEMA3EO15041 775 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 SNPHO15079 494 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 GRIN3BO60391 1043 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 GJB2P29033 226 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 APLP1P51693 650 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 STK3Q13188 491 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 FBXO33Q7Z6M2 555 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 FAM84BQ96KN1 310 aaPredicted RBP10.37□□□□□ -0.75
SMAD4-206ENST00000588860 ARMT1Q9H993 441 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 RAI14Q9P0K7 980 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 ABCF2Q9UG63 623 aa10.37□□□□□ -0.75
SMAD4-206ENST00000588860 DUOX1Q9NRD9 1551 aa10.36□□□□□ -0.75
SMAD4-206ENST00000588860 CYP7A1P22680 504 aa10.36□□□□□ -0.75
SMAD4-206ENST00000588860 HIBADHP31937 336 aaKnown RBP10.36□□□□□ -0.75
SMAD4-206ENST00000588860 EXOSC10Q01780 885 aaKnown RBP10.36□□□□□ -0.75
SMAD4-206ENST00000588860 BRF1Q92994 677 aa10.36□□□□□ -0.75
SMAD4-206ENST00000588860 ANKIB1Q9P2G1 1089 aa10.36□□□□□ -0.75
SMAD4-206ENST00000588860 DLEC1Q9Y238 1755 aa10.36□□□□□ -0.75
SMAD4-206ENST00000588860 ZMYM6O95789 1325 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 XDHP47989 1333 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
SMAD4-206ENST00000588860 PNPLA7Q6ZV29 1317 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 MAGEB6P1A0A0J9YX57 407 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 PATL2C9JE40 543 aaKnown RBP10.35□□□□□ -0.75
SMAD4-206ENST00000588860 STX6O43752 255 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 DTNBO60941 627 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 ZSCAN22P10073 491 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-206ENST00000588860 GNAT2P19087 354 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 SYT1P21579 422 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 APOBRQ0VD83 1088 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 CHAF1AQ13111 956 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-206ENST00000588860 ALX1Q15699 326 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 SKOR2Q2VWA4 1001 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-206ENST00000588860 CRY2Q49AN0 593 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 CHST3Q7LGC8 479 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 RALYLQ86SE5 291 aaKnown RBP10.35□□□□□ -0.75
SMAD4-206ENST00000588860 SLC51AQ86UW1 340 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 COL23A1Q86Y22 540 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-206ENST00000588860 LCORLQ8N3X6 602 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 MIGA1Q8NAN2 632 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 NCOA7Q8NI08 942 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 GTF3C6Q969F1 213 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 NAP1L2Q9ULW6 460 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-206ENST00000588860 LEMD3Q9Y2U8 911 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 SLC4A4Q9Y6R1 1079 aa10.35□□□□□ -0.75
SMAD4-206ENST00000588860 IRS2Q9Y4H2 1338 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 PRC1O43663 620 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 MCM5P33992 734 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 TDO2P48775 406 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 GPSM2P81274 684 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 TRDNQ13061 729 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 NAA16Q6N069 864 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-206ENST00000588860 TBC1D10CQ8IV04 446 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 MB21D2Q8IYB1 491 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-206ENST00000588860 IFNL3Q8IZI9 196 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 FLAD1Q8NFF5 587 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 ZNF526Q8TF50 670 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-206ENST00000588860 CHAMP1Q96JM3 812 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 NACAP1Q9BZK3 213 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 NAPBQ9H115 298 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-206ENST00000588860 EPB41L4AQ9HCS5 686 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-206ENST00000588860 FOCADQ5VW36 1801 aa10.34□□□□□ -0.75
SMAD4-206ENST00000588860 WDR19Q8NEZ3 1342 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 MYH1P12882 1939 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 GOLGB1Q14789 3259 aaKnown RBP10.33□□□□□ -0.76
SMAD4-206ENST00000588860 VPS37CA5D8V6 355 aaPredicted RBP10.33□□□□□ -0.76
SMAD4-206ENST00000588860 GSG1L2A8MUP6 293 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms