RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ZBTB7BO15156 539 aaPredicted RBP27.51■■□□□ 1.99
CAPNS1-205ENST00000588780 EVI5O60447 810 aa27.51■■□□□ 1.99
CAPNS1-205ENST00000588780 INPP5BP32019 993 aa27.51■■□□□ 1.99
CAPNS1-205ENST00000588780 FCGRTP55899 365 aa27.51■■□□□ 1.99
CAPNS1-205ENST00000588780 PRKCZQ05513 592 aa27.5■■□□□ 1.99
CAPNS1-205ENST00000588780 ZDHHC15Q96MV8 337 aa27.5■■□□□ 1.99
CAPNS1-205ENST00000588780 MROH5Q6ZUA9 1318 aa27.49■■□□□ 1.99
CAPNS1-205ENST00000588780 UBE2Q1Q7Z7E8 422 aa27.49■■□□□ 1.99
CAPNS1-205ENST00000588780 SLAIN1Q8ND83 568 aa27.49■■□□□ 1.99
CAPNS1-205ENST00000588780 PARK7Q99497 189 aaKnown RBP27.49■■□□□ 1.99
CAPNS1-205ENST00000588780 UNC93B1Q9H1C4 597 aa27.49■■□□□ 1.99
CAPNS1-205ENST00000588780 MAST3O60307 1309 aa27.48■■□□□ 1.99
CAPNS1-205ENST00000588780 FKBP1CQ5VVH2 108 aa27.48■■□□□ 1.99
CAPNS1-205ENST00000588780 FBXO33Q7Z6M2 555 aa27.48■■□□□ 1.99
CAPNS1-205ENST00000588780 PRO3102Q9H379 93 aa27.48■■□□□ 1.99
CAPNS1-205ENST00000588780 TFRCP02786 760 aaKnown RBP27.47■■□□□ 1.99
CAPNS1-205ENST00000588780 CCDC27Q2M243 656 aa27.47■■□□□ 1.99
CAPNS1-205ENST00000588780 METTL24Q5JXM2 366 aa27.47■■□□□ 1.99
CAPNS1-205ENST00000588780 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
CAPNS1-205ENST00000588780 APOBEC3HQ6NTF7 200 aaKnown RBP27.46■■□□□ 1.99
CAPNS1-205ENST00000588780 IL16Q14005 1332 aa27.45■■□□□ 1.99
CAPNS1-205ENST00000588780 FANCIQ9NVI1 1328 aa27.45■■□□□ 1.99
CAPNS1-205ENST00000588780 A0A1W2PPC1 479 aa27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 VAMP4O75379 141 aa27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 SGPL1O95470 568 aa27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 CYP2C8P10632 490 aa27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 TCP10Q12799 353 aa27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 LRCH3Q96II8 777 aa27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 GABRQQ9UN88 632 aa27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 KCNH4Q9UQ05 1017 aa27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 RANBP2P49792 3224 aaKnown RBP27.45■■□□□ 1.98
CAPNS1-205ENST00000588780 ADGRA2Q96PE1 1338 aa27.44■■□□□ 1.98
CAPNS1-205ENST00000588780 CACNA1FO60840 1977 aa27.44■■□□□ 1.98
CAPNS1-205ENST00000588780 ADCY3O60266 1144 aa27.44■■□□□ 1.98
CAPNS1-205ENST00000588780 MRIQ9BWK5 157 aa27.44■■□□□ 1.98
CAPNS1-205ENST00000588780 STAP2Q9UGK3 403 aa27.44■■□□□ 1.98
CAPNS1-205ENST00000588780 TAOK2Q9UL54 1235 aa27.44■■□□□ 1.98
CAPNS1-205ENST00000588780 SOX1O00570 391 aaPredicted RBP27.43■■□□□ 1.98
CAPNS1-205ENST00000588780 ZEB1P37275 1124 aaPredicted RBP27.43■■□□□ 1.98
CAPNS1-205ENST00000588780 BCAMP50895 628 aa27.43■■□□□ 1.98
CAPNS1-205ENST00000588780 RPAP1Q9BWH6 1393 aaPredicted RBP27.43■■□□□ 1.98
CAPNS1-205ENST00000588780 AK9Q5TCS8 1911 aa27.42■■□□□ 1.98
CAPNS1-205ENST00000588780 EXOSC9Q06265 439 aaKnown RBP27.42■■□□□ 1.98
CAPNS1-205ENST00000588780 HHIPL2Q6UWX4 724 aa27.42■■□□□ 1.98
CAPNS1-205ENST00000588780 FAM151AQ8WW52 585 aa27.42■■□□□ 1.98
CAPNS1-205ENST00000588780 SUCLG2Q96I99 432 aa27.42■■□□□ 1.98
CAPNS1-205ENST00000588780 DEFB118Q96PH6 123 aa27.42■■□□□ 1.98
CAPNS1-205ENST00000588780 SRCIN1Q9C0H9 1055 aa27.42■■□□□ 1.98
CAPNS1-205ENST00000588780 ELNP15502 786 aa27.41■■□□□ 1.98
CAPNS1-205ENST00000588780 SUGT1Q9Y2Z0 365 aa27.41■■□□□ 1.98
CAPNS1-205ENST00000588780 ALDH1L1O75891 902 aa27.4■■□□□ 1.98
CAPNS1-205ENST00000588780 INHAP05111 366 aa27.4■■□□□ 1.98
CAPNS1-205ENST00000588780 BCRP11274 1271 aa27.4■■□□□ 1.98
CAPNS1-205ENST00000588780 FLT3LGP49771 235 aa27.4■■□□□ 1.98
CAPNS1-205ENST00000588780 LRRC24Q50LG9 513 aa27.4■■□□□ 1.98
CAPNS1-205ENST00000588780 SALL2Q9Y467 1007 aaPredicted RBP27.4■■□□□ 1.98
CAPNS1-205ENST00000588780 TNPO2O14787 897 aaKnown RBP27.39■■□□□ 1.98
CAPNS1-205ENST00000588780 GADL1Q6ZQY3 521 aa27.39■■□□□ 1.98
CAPNS1-205ENST00000588780 ZNF112Q9UJU3 913 aa27.39■■□□□ 1.98
CAPNS1-205ENST00000588780 CXCL11O14625 94 aa27.38■■□□□ 1.97
CAPNS1-205ENST00000588780 MOGSQ13724 837 aa27.38■■□□□ 1.97
CAPNS1-205ENST00000588780 PDE8BO95263 885 aa27.37■■□□□ 1.97
CAPNS1-205ENST00000588780 IFIT1P09914 478 aaKnown RBP27.37■■□□□ 1.97
CAPNS1-205ENST00000588780 NOL9Q5SY16 702 aaKnown RBP27.37■■□□□ 1.97
CAPNS1-205ENST00000588780 GPAT2Q6NUI2 795 aa27.37■■□□□ 1.97
CAPNS1-205ENST00000588780 FASTKD5Q7L8L6 764 aaKnown RBP27.37■■□□□ 1.97
CAPNS1-205ENST00000588780 SMCR8Q8TEV9 937 aaPredicted RBP27.37■■□□□ 1.97
CAPNS1-205ENST00000588780 SPINK5Q9NQ38 1064 aaPredicted RBP27.37■■□□□ 1.97
CAPNS1-205ENST00000588780 PICK1Q9NRD5 415 aa27.37■■□□□ 1.97
CAPNS1-205ENST00000588780 PAWRQ96IZ0 340 aaKnown RBP27.36■■□□□ 1.97
CAPNS1-205ENST00000588780 ZHX2Q9Y6X8 837 aa27.36■■□□□ 1.97
CAPNS1-205ENST00000588780 CDC42EP5Q6NZY7 148 aa27.35■■□□□ 1.97
CAPNS1-205ENST00000588780 WDR66Q8TBY9 1149 aa27.35■■□□□ 1.97
CAPNS1-205ENST00000588780 BICC1Q9H694 974 aaKnown RBP27.35■■□□□ 1.97
CAPNS1-205ENST00000588780 NBPF7P0C2Y1 421 aaPredicted RBP27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 CAPN2P17655 700 aa27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 MNX1P50219 401 aaPredicted RBP27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 NFIAQ12857 509 aa27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 NECAB2Q7Z6G3 386 aa27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 PXYLP1Q8TE99 480 aa27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 KAZALD1Q96I82 304 aa27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 CUL9Q8IWT3 2517 aa27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 MGAMO43451 1857 aa27.34■■□□□ 1.97
CAPNS1-205ENST00000588780 DIXDC1Q155Q3 683 aa27.33■■□□□ 1.97
CAPNS1-205ENST00000588780 C7orf61Q8IZ16 206 aa27.33■■□□□ 1.97
CAPNS1-205ENST00000588780 DEFB123Q8N688 67 aa27.33■■□□□ 1.97
CAPNS1-205ENST00000588780 COA7Q96BR5 231 aa27.33■■□□□ 1.97
CAPNS1-205ENST00000588780 USP40Q9NVE5 1235 aa27.33■■□□□ 1.97
CAPNS1-205ENST00000588780 DAGLAQ9Y4D2 1042 aa27.33■■□□□ 1.97
CAPNS1-205ENST00000588780 PUM3Q15397 648 aaKnown RBP27.32■■□□□ 1.96
CAPNS1-205ENST00000588780 ZMYND8Q9ULU4 1186 aaPredicted RBP27.32■■□□□ 1.96
CAPNS1-205ENST00000588780 SCYL3Q8IZE3 742 aa27.31■■□□□ 1.96
CAPNS1-205ENST00000588780 VGLL2Q8N8G2 317 aa27.31■■□□□ 1.96
CAPNS1-205ENST00000588780 KLHDC4Q8TBB5 520 aa27.31■■□□□ 1.96
CAPNS1-205ENST00000588780 A0A0G2JLL6 359 aaPredicted RBP27.3■■□□□ 1.96
CAPNS1-205ENST00000588780 SLC5A1P13866 664 aa27.3■■□□□ 1.96
CAPNS1-205ENST00000588780 IRF5Q13568 498 aa27.3■■□□□ 1.96
CAPNS1-205ENST00000588780 PRRT2Q7Z6L0 340 aaPredicted RBP27.3■■□□□ 1.96
CAPNS1-205ENST00000588780 ZSCAN29Q8IWY8 852 aaPredicted RBP27.3■■□□□ 1.96
CAPNS1-205ENST00000588780 LRRFIP2Q9Y608 721 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms