RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 ZBTB48P10074 688 aaPredicted RBP18.29■□□□□ 0.52
HDAC5-207ENST00000588261 CACNB3P54284 484 aa18.29■□□□□ 0.52
HDAC5-207ENST00000588261 CHAF1AQ13111 956 aaPredicted RBP18.29■□□□□ 0.52
HDAC5-207ENST00000588261 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
HDAC5-207ENST00000588261 CEP126Q9P2H0 1117 aa18.29■□□□□ 0.52
HDAC5-207ENST00000588261 UNCXA6NJT0 531 aa18.28■□□□□ 0.52
HDAC5-207ENST00000588261 TCP10L2B9ZVM9 353 aa18.28■□□□□ 0.52
HDAC5-207ENST00000588261 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
HDAC5-207ENST00000588261 PUM3Q15397 648 aaKnown RBP18.28■□□□□ 0.52
HDAC5-207ENST00000588261 SUPT20HL1Q3ZLR7 823 aa18.28■□□□□ 0.52
HDAC5-207ENST00000588261 GPR108Q9NPR9 543 aa18.28■□□□□ 0.52
HDAC5-207ENST00000588261 AKAP2Q9Y2D5 859 aa18.28■□□□□ 0.52
HDAC5-207ENST00000588261 OS9Q13438 667 aaPredicted RBP18.27■□□□□ 0.52
HDAC5-207ENST00000588261 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.52
HDAC5-207ENST00000588261 MS4A4AQ96JQ5 239 aa18.27■□□□□ 0.52
HDAC5-207ENST00000588261 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.52
HDAC5-207ENST00000588261 KIAA0100Q14667 2235 aaKnown RBP18.26■□□□□ 0.51
HDAC5-207ENST00000588261 TESPA1A2RU30 521 aaPredicted RBP18.26■□□□□ 0.51
HDAC5-207ENST00000588261 OTUD7BQ6GQQ9 843 aa18.26■□□□□ 0.51
HDAC5-207ENST00000588261 APOBEC3HQ6NTF7 200 aaKnown RBP18.26■□□□□ 0.51
HDAC5-207ENST00000588261 ELP3Q9H9T3 547 aa18.26■□□□□ 0.51
HDAC5-207ENST00000588261 IREB2P48200 963 aaKnown RBP18.25■□□□□ 0.51
HDAC5-207ENST00000588261 ANKRD13AQ8IZ07 590 aa18.25■□□□□ 0.51
HDAC5-207ENST00000588261 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.25■□□□□ 0.51
HDAC5-207ENST00000588261 LPIN2Q92539 896 aa18.25■□□□□ 0.51
HDAC5-207ENST00000588261 ZBTB22O15209 634 aa18.24■□□□□ 0.51
HDAC5-207ENST00000588261 IFIT1P09914 478 aaKnown RBP18.24■□□□□ 0.51
HDAC5-207ENST00000588261 CRHR2Q13324 411 aa18.24■□□□□ 0.51
HDAC5-207ENST00000588261 VGLL4Q14135 290 aa18.24■□□□□ 0.51
HDAC5-207ENST00000588261 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
HDAC5-207ENST00000588261 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
HDAC5-207ENST00000588261 OPTNQ96CV9 577 aa18.24■□□□□ 0.51
HDAC5-207ENST00000588261 ZDHHC15Q96MV8 337 aa18.24■□□□□ 0.51
HDAC5-207ENST00000588261 TRIM17Q9Y577 477 aa18.24■□□□□ 0.51
HDAC5-207ENST00000588261 SLC5A1P13866 664 aa18.23■□□□□ 0.51
HDAC5-207ENST00000588261 HDLBPQ00341 1268 aaKnown RBP18.23■□□□□ 0.51
HDAC5-207ENST00000588261 TFCP2Q12800 502 aa18.23■□□□□ 0.51
HDAC5-207ENST00000588261 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
HDAC5-207ENST00000588261 ATP2B3Q16720 1220 aa18.23■□□□□ 0.51
HDAC5-207ENST00000588261 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
HDAC5-207ENST00000588261 ERO1AQ96HE7 468 aa18.23■□□□□ 0.51
HDAC5-207ENST00000588261 LRRCC1Q9C099 1032 aa18.23■□□□□ 0.51
HDAC5-207ENST00000588261 CAVIN4Q5BKX8 364 aa18.22■□□□□ 0.51
HDAC5-207ENST00000588261 OTOP1Q7RTM1 612 aa18.22■□□□□ 0.51
HDAC5-207ENST00000588261 VPS37DQ86XT2 251 aa18.22■□□□□ 0.51
HDAC5-207ENST00000588261 SNCAIPQ9Y6H5 919 aa18.22■□□□□ 0.51
HDAC5-207ENST00000588261 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
HDAC5-207ENST00000588261 TNNI3KQ59H18 835 aa18.21■□□□□ 0.51
HDAC5-207ENST00000588261 CLASRPQ8N2M8 674 aaKnown RBP18.21■□□□□ 0.51
HDAC5-207ENST00000588261 TBC1D22AQ8WUA7 517 aa18.21■□□□□ 0.51
HDAC5-207ENST00000588261 TEKT1Q969V4 418 aa18.21■□□□□ 0.51
HDAC5-207ENST00000588261 MRIQ9BWK5 157 aa18.21■□□□□ 0.51
HDAC5-207ENST00000588261 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.21■□□□□ 0.51
HDAC5-207ENST00000588261 FPGT-TNNI3KV9GXZ4 949 aa18.21■□□□□ 0.51
HDAC5-207ENST00000588261 A0A1B0GUL7 405 aa18.2■□□□□ 0.5
HDAC5-207ENST00000588261 MAP3K9P80192 1104 aa18.2■□□□□ 0.5
HDAC5-207ENST00000588261 FAM43AQ8N2R8 423 aa18.2■□□□□ 0.5
HDAC5-207ENST00000588261 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
HDAC5-207ENST00000588261 BRCA2P51587 3418 aa18.2■□□□□ 0.5
HDAC5-207ENST00000588261 IGHDP01880 384 aa18.19■□□□□ 0.5
HDAC5-207ENST00000588261 PRDX5P30044 214 aa18.19■□□□□ 0.5
HDAC5-207ENST00000588261 CENPFP49454 3210 aa18.19■□□□□ 0.5
HDAC5-207ENST00000588261 ARHGEF6Q15052 776 aa18.19■□□□□ 0.5
HDAC5-207ENST00000588261 DIXDC1Q155Q3 683 aa18.19■□□□□ 0.5
HDAC5-207ENST00000588261 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
HDAC5-207ENST00000588261 FRAT2O75474 233 aaPredicted RBP18.18■□□□□ 0.5
HDAC5-207ENST00000588261 ADORA1P30542 326 aa18.18■□□□□ 0.5
HDAC5-207ENST00000588261 NFIAQ12857 509 aa18.18■□□□□ 0.5
HDAC5-207ENST00000588261 HHIPL2Q6UWX4 724 aa18.18■□□□□ 0.5
HDAC5-207ENST00000588261 ZKSCAN4Q969J2 545 aaPredicted RBP18.18■□□□□ 0.5
HDAC5-207ENST00000588261 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
HDAC5-207ENST00000588261 PTPN22Q9Y2R2 807 aa18.18■□□□□ 0.5
HDAC5-207ENST00000588261 SUGT1Q9Y2Z0 365 aa18.18■□□□□ 0.5
HDAC5-207ENST00000588261 MKI67P46013 3256 aaKnown RBP18.17■□□□□ 0.5
HDAC5-207ENST00000588261 SPDYE5A6NIY4 337 aa18.17■□□□□ 0.5
HDAC5-207ENST00000588261 PHKA1P46020 1223 aa18.17■□□□□ 0.5
HDAC5-207ENST00000588261 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
HDAC5-207ENST00000588261 FAM83AQ86UY5 434 aa18.17■□□□□ 0.5
HDAC5-207ENST00000588261 EAF2Q96CJ1 260 aaPredicted RBP18.17■□□□□ 0.5
HDAC5-207ENST00000588261 OTUD5Q96G74 571 aa18.17■□□□□ 0.5
HDAC5-207ENST00000588261 EFCC1Q9HA90 598 aa18.17■□□□□ 0.5
HDAC5-207ENST00000588261 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
HDAC5-207ENST00000588261 RPAP1Q9BWH6 1393 aaPredicted RBP18.17■□□□□ 0.5
HDAC5-207ENST00000588261 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 MYH13Q9UKX3 1938 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 CCL15-CCL14A0A0B4J2E2 113 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 POTEFA5A3E0 1075 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 TNNI2P48788 182 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 SP3Q02447 781 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 CCL15Q16663 113 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 FKBP1CQ5VVH2 108 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 CDC42EP5Q6NZY7 148 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 XAGE2Q96GT9 111 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 CCDC136Q96JN2 1154 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
HDAC5-207ENST00000588261 SEMA3EO15041 775 aa18.15■□□□□ 0.5
HDAC5-207ENST00000588261 INPP5BP32019 993 aa18.15■□□□□ 0.5
HDAC5-207ENST00000588261 TIMM10P62072 90 aa18.15■□□□□ 0.5
HDAC5-207ENST00000588261 NUCB1Q02818 461 aa18.15■□□□□ 0.5
HDAC5-207ENST00000588261 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms