RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 TCP10L2B9ZVM9 353 aa23.54■■□□□ 1.36
CIRBP-217ENST00000588230 RAB11FIP3O75154 756 aa23.54■■□□□ 1.36
CIRBP-217ENST00000588230 MCAMP43121 646 aa23.54■■□□□ 1.36
CIRBP-217ENST00000588230 TNNI2P48788 182 aa23.54■■□□□ 1.36
CIRBP-217ENST00000588230 DZIP1Q86YF9 867 aaKnown RBP23.54■■□□□ 1.36
CIRBP-217ENST00000588230 KIF1BPQ96EK5 621 aa23.54■■□□□ 1.36
CIRBP-217ENST00000588230 IL1RAPL2Q9NP60 686 aa23.54■■□□□ 1.36
CIRBP-217ENST00000588230 SUPT20HL1Q3ZLR7 823 aa23.53■■□□□ 1.36
CIRBP-217ENST00000588230 ERICH6Q7L0X2 663 aa23.53■■□□□ 1.36
CIRBP-217ENST00000588230 SNRKQ9NRH2 765 aa23.53■■□□□ 1.36
CIRBP-217ENST00000588230 RNF186Q9NXI6 227 aa23.53■■□□□ 1.36
CIRBP-217ENST00000588230 SAGE1Q9NXZ1 904 aa23.53■■□□□ 1.36
CIRBP-217ENST00000588230 TLR7Q9NYK1 1049 aaKnown RBP23.53■■□□□ 1.36
CIRBP-217ENST00000588230 DAGLAQ9Y4D2 1042 aa23.53■■□□□ 1.36
CIRBP-217ENST00000588230 OTOFQ9HC10 1997 aa23.52■■□□□ 1.36
CIRBP-217ENST00000588230 TBC1D9Q6ZT07 1266 aa23.52■■□□□ 1.36
CIRBP-217ENST00000588230 SLF2Q8IX21 1173 aa23.52■■□□□ 1.36
CIRBP-217ENST00000588230 CLASRPQ8N2M8 674 aaKnown RBP23.52■■□□□ 1.36
CIRBP-217ENST00000588230 ZNF512BQ96KM6 892 aaPredicted RBP23.52■■□□□ 1.36
CIRBP-217ENST00000588230 BCL11AQ9H165 835 aa23.52■■□□□ 1.36
CIRBP-217ENST00000588230 AKAP11Q9UKA4 1901 aa23.51■■□□□ 1.35
CIRBP-217ENST00000588230 CACNB3P54284 484 aa23.51■■□□□ 1.35
CIRBP-217ENST00000588230 CLMNQ96JQ2 1002 aa23.51■■□□□ 1.35
CIRBP-217ENST00000588230 TMEM39BQ9GZU3 492 aa23.51■■□□□ 1.35
CIRBP-217ENST00000588230 CASP8AP2Q9UKL3 1982 aa23.51■■□□□ 1.35
CIRBP-217ENST00000588230 LAMB1P07942 1786 aa23.5■■□□□ 1.35
CIRBP-217ENST00000588230 USP2O75604 605 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-217ENST00000588230 CRBNQ96SW2 442 aa23.5■■□□□ 1.35
CIRBP-217ENST00000588230 RAI14Q9P0K7 980 aa23.5■■□□□ 1.35
CIRBP-217ENST00000588230 LRP2BPQ9P2M1 347 aa23.5■■□□□ 1.35
CIRBP-217ENST00000588230 PPP1R12BO60237 982 aaPredicted RBP23.49■■□□□ 1.35
CIRBP-217ENST00000588230 MECOMQ03112 1051 aa23.49■■□□□ 1.35
CIRBP-217ENST00000588230 FKBP1CQ5VVH2 108 aa23.49■■□□□ 1.35
CIRBP-217ENST00000588230 SPRYD7Q5W111 196 aa23.49■■□□□ 1.35
CIRBP-217ENST00000588230 CDC42EP5Q6NZY7 148 aa23.49■■□□□ 1.35
CIRBP-217ENST00000588230 REM2Q8IYK8 340 aaPredicted RBP23.49■■□□□ 1.35
CIRBP-217ENST00000588230 TRPA1O75762 1119 aa23.48■■□□□ 1.35
CIRBP-217ENST00000588230 IFIT2P09913 472 aaKnown RBP23.48■■□□□ 1.35
CIRBP-217ENST00000588230 GSTO1P78417 241 aa23.48■■□□□ 1.35
CIRBP-217ENST00000588230 MKRN3Q13064 507 aaKnown RBP23.48■■□□□ 1.35
CIRBP-217ENST00000588230 USP40Q9NVE5 1235 aa23.48■■□□□ 1.35
CIRBP-217ENST00000588230 MYH2Q9UKX2 1941 aa23.48■■□□□ 1.35
CIRBP-217ENST00000588230 UNCXA6NJT0 531 aa23.47■■□□□ 1.35
CIRBP-217ENST00000588230 LDHCP07864 332 aa23.47■■□□□ 1.35
CIRBP-217ENST00000588230 TM4SF4P48230 202 aa23.47■■□□□ 1.35
CIRBP-217ENST00000588230 FAM83AQ86UY5 434 aa23.47■■□□□ 1.35
CIRBP-217ENST00000588230 FAM163AQ96GL9 167 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-217ENST00000588230 GAKO14976 1311 aa23.47■■□□□ 1.35
CIRBP-217ENST00000588230 ZAP70P43403 619 aa23.46■■□□□ 1.35
CIRBP-217ENST00000588230 RPAP1Q9BWH6 1393 aaPredicted RBP23.46■■□□□ 1.35
CIRBP-217ENST00000588230 LRRCC1Q9C099 1032 aa23.46■■□□□ 1.35
CIRBP-217ENST00000588230 PCDHB15Q9Y5E8 787 aa23.46■■□□□ 1.35
CIRBP-217ENST00000588230 MROH7-TTC4A0A0A0MT08 1334 aa23.45■■□□□ 1.34
CIRBP-217ENST00000588230 CYP2E1P05181 493 aaPredicted RBP23.45■■□□□ 1.34
CIRBP-217ENST00000588230 GJA5P36382 358 aa23.45■■□□□ 1.34
CIRBP-217ENST00000588230 IREB2P48200 963 aaKnown RBP23.45■■□□□ 1.34
CIRBP-217ENST00000588230 NSUN4Q96CB9 384 aaKnown RBP23.45■■□□□ 1.34
CIRBP-217ENST00000588230 WNK4Q96J92 1243 aa23.45■■□□□ 1.34
CIRBP-217ENST00000588230 DCTPP1Q9H773 170 aa23.45■■□□□ 1.34
CIRBP-217ENST00000588230 BTDP43251 543 aa23.44■■□□□ 1.34
CIRBP-217ENST00000588230 ZNF384Q8TF68 577 aa23.44■■□□□ 1.34
CIRBP-217ENST00000588230 SLC10A4Q96EP9 437 aa23.44■■□□□ 1.34
CIRBP-217ENST00000588230 RFX7Q2KHR2 1363 aa23.43■■□□□ 1.34
CIRBP-217ENST00000588230 CAPN15O75808 1086 aa23.43■■□□□ 1.34
CIRBP-217ENST00000588230 TCP10Q12799 353 aa23.43■■□□□ 1.34
CIRBP-217ENST00000588230 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.43■■□□□ 1.34
CIRBP-217ENST00000588230 ANKRD13AQ8IZ07 590 aa23.43■■□□□ 1.34
CIRBP-217ENST00000588230 GPR75-ASB3A0A0A6YYF3 556 aa23.42■■□□□ 1.34
CIRBP-217ENST00000588230 ZBTB48P10074 688 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-217ENST00000588230 NFIAQ12857 509 aa23.42■■□□□ 1.34
CIRBP-217ENST00000588230 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.42■■□□□ 1.347e-15■□□□□ 9.7
CIRBP-217ENST00000588230 FAM151AQ8WW52 585 aa23.42■■□□□ 1.34
CIRBP-217ENST00000588230 HOOK2Q96ED9 719 aa23.42■■□□□ 1.34
CIRBP-217ENST00000588230 PIH1D3Q9NQM4 214 aaKnown RBP23.42■■□□□ 1.34
CIRBP-217ENST00000588230 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-217ENST00000588230 IGSF3O75054 1194 aa23.41■■□□□ 1.34
CIRBP-217ENST00000588230 NAA16Q6N069 864 aaPredicted RBP23.41■■□□□ 1.34
CIRBP-217ENST00000588230 NOL10Q9BSC4 688 aaKnown RBP23.41■■□□□ 1.34
CIRBP-217ENST00000588230 FAM198AQ9UFP1 575 aa23.41■■□□□ 1.34
CIRBP-217ENST00000588230 SUPT16HQ9Y5B9 1047 aaKnown RBP23.41■■□□□ 1.34
CIRBP-217ENST00000588230 SMARCA5O60264 1052 aaPredicted RBP23.4■■□□□ 1.34
CIRBP-217ENST00000588230 SREBF2Q12772 1141 aa23.4■■□□□ 1.34
CIRBP-217ENST00000588230 ABHD8Q96I13 439 aa23.4■■□□□ 1.34
CIRBP-217ENST00000588230 IDI2Q9BXS1 227 aa23.4■■□□□ 1.34
CIRBP-217ENST00000588230 NDUFB9Q9Y6M9 179 aa23.4■■□□□ 1.34
CIRBP-217ENST00000588230 IDH1O75874 414 aaKnown RBP23.39■■□□□ 1.33
CIRBP-217ENST00000588230 RGS3P49796 1198 aa23.39■■□□□ 1.33
CIRBP-217ENST00000588230 VGLL4Q14135 290 aa23.39■■□□□ 1.33
CIRBP-217ENST00000588230 CFHR5Q9BXR6 569 aa23.39■■□□□ 1.33
CIRBP-217ENST00000588230 AK9Q5TCS8 1911 aa23.39■■□□□ 1.33
CIRBP-217ENST00000588230 MANSC4A6NHS7 340 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-217ENST00000588230 ENTPD3O75355 529 aa23.38■■□□□ 1.33
CIRBP-217ENST00000588230 MAP4K4O95819 1239 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-217ENST00000588230 AAMPQ13685 434 aa23.38■■□□□ 1.33
CIRBP-217ENST00000588230 DCAF15Q66K64 600 aa23.38■■□□□ 1.33
CIRBP-217ENST00000588230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.38■■□□□ 1.33
CIRBP-217ENST00000588230 CNKSR2Q8WXI2 1034 aa23.38■■□□□ 1.33
CIRBP-217ENST00000588230 MCOLN1Q9GZU1 580 aa23.38■■□□□ 1.33
CIRBP-217ENST00000588230 R3HDMLQ9H3Y0 253 aa23.38■■□□□ 1.33
CIRBP-217ENST00000588230 ELP3Q9H9T3 547 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms