RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SLC4A4Q9Y6R1 1079 aa13.52□□□□□ -0.25
VMP1-207ENST00000588131 SBF1O95248 1867 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 LAMA4Q16363 1823 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 GSG1L2A8MUP6 293 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 PATL2C9JE40 543 aaKnown RBP13.51□□□□□ -0.25
VMP1-207ENST00000588131 FGAP02671 866 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 VIL1P09327 827 aaKnown RBP13.51□□□□□ -0.25
VMP1-207ENST00000588131 BTDP43251 543 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 ANAPC15P60006 121 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 CXCL9Q07325 125 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
VMP1-207ENST00000588131 SDR42E1Q8WUS8 393 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 FAM163AQ96GL9 167 aaPredicted RBP13.51□□□□□ -0.25
VMP1-207ENST00000588131 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
VMP1-207ENST00000588131 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
VMP1-207ENST00000588131 CDK5RAP2Q96SN8 1893 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 APPP05067 770 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 CYP21A2P08686 494 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 GNAT2P19087 354 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 PPP4CP60510 307 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 CIAPIN1Q6FI81 312 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 SLF2Q8IX21 1173 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 IFNL3Q8IZI9 196 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 GMLQ99445 158 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 ZBTB12Q9Y330 459 aaPredicted RBP13.5□□□□□ -0.25
VMP1-207ENST00000588131 PCDHAC2Q9Y5I4 1007 aa13.5□□□□□ -0.25
VMP1-207ENST00000588131 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
VMP1-207ENST00000588131 NAV1Q8NEY1 1877 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 MYO3BQ8WXR4 1341 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 FZD9O00144 591 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 BAG3O95817 575 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 ANP32AP39687 249 aaKnown RBP13.49□□□□□ -0.25
VMP1-207ENST00000588131 CRKP46108 304 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 ALX1Q15699 326 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 RNF20Q5VTR2 975 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 HHIPL2Q6UWX4 724 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 TEKT1Q969V4 418 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
VMP1-207ENST00000588131 CRNKL1Q9BZJ0 848 aaKnown RBP13.49□□□□□ -0.25
VMP1-207ENST00000588131 TIAM2Q8IVF5 1701 aa13.49□□□□□ -0.25
VMP1-207ENST00000588131 DDX60LQ5H9U9 1706 aaKnown RBP13.48□□□□□ -0.25
VMP1-207ENST00000588131 ZMYM6O95789 1325 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 ZNF541Q9H0D2 1346 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 LMNB1P20700 586 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 RHBDL3P58872 404 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 HAND2P61296 217 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 HDLBPQ00341 1268 aaKnown RBP13.48□□□□□ -0.25
VMP1-207ENST00000588131 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
VMP1-207ENST00000588131 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 NAPBQ9H115 298 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 CTNNA3Q9UI47 895 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 BAZ2AQ9UIF9 1905 aaKnown RBP13.48□□□□□ -0.25
VMP1-207ENST00000588131 FOCADQ5VW36 1801 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 LAMB1P07942 1786 aa13.48□□□□□ -0.25
VMP1-207ENST00000588131 ZKSCAN1P17029 563 aaPredicted RBP13.47□□□□□ -0.25
VMP1-207ENST00000588131 TDO2P48775 406 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 RABEP1Q15276 862 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 IMMTQ16891 758 aaKnown RBP13.47□□□□□ -0.25
VMP1-207ENST00000588131 TSGA10IPQ3SY00 556 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
VMP1-207ENST00000588131 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 ZDHHC15Q96MV8 337 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 JAKMIP1Q96N16 626 aaKnown RBP13.47□□□□□ -0.25
VMP1-207ENST00000588131 MRIQ9BWK5 157 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 NACAP1Q9BZK3 213 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
VMP1-207ENST00000588131 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 CPA1P15085 419 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 USP5P45974 858 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 EIF6P56537 245 aaKnown RBP13.46□□□□□ -0.25
VMP1-207ENST00000588131 TNIP1Q15025 636 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 CFAP100Q494V2 611 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 TGFBRAP1Q8WUH2 860 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.25
VMP1-207ENST00000588131 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.25
VMP1-207ENST00000588131 ATP8A2Q9NTI2 1148 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 SERPINA10Q9UK55 444 aa13.46□□□□□ -0.25
VMP1-207ENST00000588131 CYP2D7A0A087X1C5 515 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 SHTN1A0MZ66 631 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 E7EWF7 191 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 ZNF213O14771 459 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 CD2BP2O95400 341 aaKnown RBP13.45□□□□□ -0.26
VMP1-207ENST00000588131 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 RBM5P52756 815 aaKnown RBP eCLIP13.45□□□□□ -0.26
VMP1-207ENST00000588131 EVX2Q03828 476 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 CTDSPL2Q05D32 466 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 GPR162Q16538 588 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 GIMAP6Q6P9H5 292 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 CTR9Q6PD62 1173 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 CERS3Q8IU89 383 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 MAPKAPK5Q8IW41 473 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 USP40Q9NVE5 1235 aa13.45□□□□□ -0.26
VMP1-207ENST00000588131 RNF181Q9P0P0 153 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms