RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 RASA3Q14644 834 aa7.98□□□□□ -1.13
TUBD1-208ENST00000588009 DDX54Q8TDD1 881 aaKnown RBP7.98□□□□□ -1.13
TUBD1-208ENST00000588009 GAL3ST3Q96A11 431 aa7.98□□□□□ -1.13
TUBD1-208ENST00000588009 LPIN3Q9BQK8 851 aa7.98□□□□□ -1.13
TUBD1-208ENST00000588009 FRRS1LQ9P0K9 344 aa7.98□□□□□ -1.13
TUBD1-208ENST00000588009 FAM177BA6PVY3 158 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 RNF225M0QZC1 329 aaPredicted RBP7.97□□□□□ -1.13
TUBD1-208ENST00000588009 IMPDH2P12268 514 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 CLCQ05315 142 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 PTPN11Q06124 597 aaPredicted RBP7.97□□□□□ -1.13
TUBD1-208ENST00000588009 IKBKEQ14164 716 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 SCARA3Q6AZY7 606 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 GK5Q6ZS86 529 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 OR6P1Q8NGX9 317 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 TTC9Q92623 222 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 RNPC3Q96LT9 517 aaKnown RBP7.97□□□□□ -1.13
TUBD1-208ENST00000588009 MDFIQ99750 246 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 ZNRF3Q9ULT6 936 aa7.97□□□□□ -1.13
TUBD1-208ENST00000588009 SOX1O00570 391 aaPredicted RBP7.96□□□□□ -1.14
TUBD1-208ENST00000588009 CLSTN1O94985 981 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 ARAFP10398 606 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 MX2P20592 715 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 CDC27P30260 824 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 CABP4P57796 275 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 RPL6Q02878 288 aaKnown RBP7.96□□□□□ -1.14
TUBD1-208ENST00000588009 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 PDZD3Q86UT5 571 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 CELF2-AS1Q8N7Q2 184 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 RBBP8NLQ8NC74 664 aaPredicted RBP7.96□□□□□ -1.14
TUBD1-208ENST00000588009 CCDC113Q9H0I3 377 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 EHMT1Q9H9B1 1298 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 MSRB2Q9Y3D2 182 aa7.96□□□□□ -1.14
TUBD1-208ENST00000588009 CCDC85CA6NKD9 419 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 TRIM37O94972 964 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 EPHA1P21709 976 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 ADH6P28332 368 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 AP3B2Q13367 1082 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 PSAPL1Q6NUJ1 521 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 MPRIPQ6WCQ1 1025 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 CACTIN-AS1Q8N1I8 211 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 ACTR10Q9NZ32 417 aa7.95□□□□□ -1.14
TUBD1-208ENST00000588009 ENPP3O14638 875 aa7.94□□□□□ -1.14
TUBD1-208ENST00000588009 ATE1O95260 518 aa7.94□□□□□ -1.14
TUBD1-208ENST00000588009 DDR2Q16832 855 aa7.94□□□□□ -1.14
TUBD1-208ENST00000588009 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
TUBD1-208ENST00000588009 ST7Q9NRC1 585 aa7.94□□□□□ -1.14
TUBD1-208ENST00000588009 POLR3KQ9Y2Y1 108 aaPredicted RBP7.94□□□□□ -1.14
TUBD1-208ENST00000588009 PCDHB14Q9Y5E9 798 aa7.94□□□□□ -1.14
TUBD1-208ENST00000588009 H3BRJ5 948 aa7.93□□□□□ -1.14
TUBD1-208ENST00000588009 GSTP1P09211 210 aaKnown RBP7.93□□□□□ -1.14
TUBD1-208ENST00000588009 CASP7P55210 303 aa7.93□□□□□ -1.14
TUBD1-208ENST00000588009 MAP1SQ66K74 1059 aaPredicted RBP7.93□□□□□ -1.14
TUBD1-208ENST00000588009 FCHSD1Q86WN1 690 aa7.93□□□□□ -1.14
TUBD1-208ENST00000588009 LSRQ86X29 649 aaPredicted RBP7.93□□□□□ -1.14
TUBD1-208ENST00000588009 KCNB2Q92953 911 aa7.93□□□□□ -1.14
TUBD1-208ENST00000588009 TNKS2Q9H2K2 1166 aa7.93□□□□□ -1.14
TUBD1-208ENST00000588009 SOX17Q9H6I2 414 aaPredicted RBP7.93□□□□□ -1.14
TUBD1-208ENST00000588009 CACNA2D2Q9NY47 1150 aa7.93□□□□□ -1.14
TUBD1-208ENST00000588009 ELOA3CA0A087WX78 387 aaPredicted RBP7.92□□□□□ -1.14
TUBD1-208ENST00000588009 ELOA3DA6NLF2 546 aaPredicted RBP7.92□□□□□ -1.14
TUBD1-208ENST00000588009 NEURL1BA8MQ27 555 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 GRIN3BO60391 1043 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 RGS9O75916 674 aaPredicted RBP7.92□□□□□ -1.14
TUBD1-208ENST00000588009 GSTM4Q03013 218 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 GAS6Q14393 721 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 ELOA3BQ3SY89 546 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 HGSNATQ68CP4 663 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.92□□□□□ -1.14
TUBD1-208ENST00000588009 LILRB2Q8N423 598 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 ELOA3Q8NG57 546 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 DNAJC7Q99615 494 aa7.92□□□□□ -1.14
TUBD1-208ENST00000588009 COL25A1Q9BXS0 654 aaPredicted RBP7.92□□□□□ -1.14
TUBD1-208ENST00000588009 CDC25BP30305 580 aa7.91□□□□□ -1.14
TUBD1-208ENST00000588009 MAP2K3P46734 347 aa7.91□□□□□ -1.14
TUBD1-208ENST00000588009 CHMP4BP1P59074 171 aa7.91□□□□□ -1.14
TUBD1-208ENST00000588009 FXNQ16595 210 aa7.91□□□□□ -1.14
TUBD1-208ENST00000588009 IL22RA1Q8N6P7 574 aa7.91□□□□□ -1.14
TUBD1-208ENST00000588009 GPR161Q8N6U8 529 aaKnown RBP7.91□□□□□ -1.14
TUBD1-208ENST00000588009 NSFL1CQ9UNZ2 370 aaKnown RBP7.91□□□□□ -1.14
TUBD1-208ENST00000588009 PDPK1O15530 556 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
TUBD1-208ENST00000588009 SELPP16109 830 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 CDK8P49336 464 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 IFRD2Q12894 506 aaPredicted RBP7.9□□□□□ -1.14
TUBD1-208ENST00000588009 RASGRF1Q13972 1273 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 GRIK5Q16478 980 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 PPP2R5EQ16537 467 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 PLEKHG4Q58EX7 1191 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 LARP1BQ659C4 914 aaKnown RBP7.9□□□□□ -1.14
TUBD1-208ENST00000588009 RUFY4Q6ZNE9 571 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 MICAL1Q8TDZ2 1067 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 SH3TC2Q8TF17 1288 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 NUDT8Q8WV74 236 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 SLC7A3Q8WY07 619 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 ZC3H12CQ9C0D7 883 aaKnown RBP7.9□□□□□ -1.14
TUBD1-208ENST00000588009 MAPK8IP1Q9UQF2 711 aa7.9□□□□□ -1.14
TUBD1-208ENST00000588009 GFRA2O00451 464 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 ALAS2P22557 587 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 BAG6P46379 1132 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 ARL4DP49703 201 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms