RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 TCP10Q12799 353 aa8.03□□□□□ -1.12
SDF2-205ENST00000587629 PUM3Q15397 648 aaKnown RBP8.03□□□□□ -1.12
SDF2-205ENST00000587629 TAF1CQ15572 869 aaPredicted RBP8.03□□□□□ -1.12
SDF2-205ENST00000587629 APOBEC3HQ6NTF7 200 aaKnown RBP8.03□□□□□ -1.12
SDF2-205ENST00000587629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.03□□□□□ -1.12
SDF2-205ENST00000587629 FAM163AQ96GL9 167 aaPredicted RBP8.03□□□□□ -1.12
SDF2-205ENST00000587629 ZDHHC15Q96MV8 337 aa8.03□□□□□ -1.12
SDF2-205ENST00000587629 WRNIP1Q96S55 665 aa8.03□□□□□ -1.12
SDF2-205ENST00000587629 SMC4Q9NTJ3 1288 aa8.03□□□□□ -1.12
SDF2-205ENST00000587629 TMOD2Q9NZR1 351 aa8.03□□□□□ -1.12
SDF2-205ENST00000587629 PDE4DIPQ5VU43 2346 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 EYA2O00167 538 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 SLC5A1P13866 664 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 EN2P19622 333 aaPredicted RBP8.02□□□□□ -1.13
SDF2-205ENST00000587629 FGFR2P21802 821 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 RFX5P48382 616 aaPredicted RBP8.02□□□□□ -1.13
SDF2-205ENST00000587629 HDLBPQ00341 1268 aaKnown RBP8.02□□□□□ -1.13
SDF2-205ENST00000587629 SLFN5Q08AF3 891 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 DIXDC1Q155Q3 683 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 INTS3Q68E01 1043 aaKnown RBP8.02□□□□□ -1.13
SDF2-205ENST00000587629 ATG9AQ7Z3C6 839 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 ZFYVE28Q9HCC9 887 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 SNCAIPQ9Y6H5 919 aa8.02□□□□□ -1.13
SDF2-205ENST00000587629 HTTP42858 3142 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 OTOFQ9HC10 1997 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 SPDYE5A6NIY4 337 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 SPDYE4A6NLX3 237 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 BTBD19C9JJ37 291 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 IRF6O14896 467 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 UBTFL1P0CB47 393 aaPredicted RBP8.01□□□□□ -1.13
SDF2-205ENST00000587629 CETPP11597 493 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 INPP5BP32019 993 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 ATP2B3Q16720 1220 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 SLC9C1Q4G0N8 1177 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 HHIPL2Q6UWX4 724 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 FAM83AQ86UY5 434 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 ERO1BQ86YB8 467 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.01□□□□□ -1.13
SDF2-205ENST00000587629 WDR66Q8TBY9 1149 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 LPIN2Q92539 896 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 MRIQ9BWK5 157 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 ARHGAP39Q9C0H5 1083 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 NOB1Q9ULX3 412 aaKnown RBP8.01□□□□□ -1.13
SDF2-205ENST00000587629 PA2G4Q9UQ80 394 aaKnown RBP8.01□□□□□ -1.13
SDF2-205ENST00000587629 PTCH2Q9Y6C5 1203 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 CENPFP49454 3210 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 MAST3O60307 1309 aa8.01□□□□□ -1.13
SDF2-205ENST00000587629 WDHD1O75717 1129 aaPredicted RBP8□□□□□ -1.13
SDF2-205ENST00000587629 PRDX5P30044 214 aa8□□□□□ -1.13
SDF2-205ENST00000587629 NFIAQ12857 509 aa8□□□□□ -1.13
SDF2-205ENST00000587629 SNAPC2Q13487 334 aa8□□□□□ -1.13
SDF2-205ENST00000587629 SLC4A8Q2Y0W8 1093 aa8□□□□□ -1.13
SDF2-205ENST00000587629 FKBP1CQ5VVH2 108 aa8□□□□□ -1.13
SDF2-205ENST00000587629 DCAF15Q66K64 600 aa8□□□□□ -1.13
SDF2-205ENST00000587629 CDC42EP5Q6NZY7 148 aa8□□□□□ -1.13
SDF2-205ENST00000587629 ZFPM1Q8IX07 1006 aa8□□□□□ -1.13
SDF2-205ENST00000587629 SH3TC2Q8TF17 1288 aa8□□□□□ -1.13
SDF2-205ENST00000587629 ARMC5Q96C12 935 aa8□□□□□ -1.13
SDF2-205ENST00000587629 HOOK2Q96ED9 719 aa8□□□□□ -1.13
SDF2-205ENST00000587629 TMEM106CQ9BVX2 250 aa8□□□□□ -1.13
SDF2-205ENST00000587629 ZNF341Q9BYN7 854 aa8□□□□□ -1.13
SDF2-205ENST00000587629 USP40Q9NVE5 1235 aa8□□□□□ -1.13
SDF2-205ENST00000587629 CEP126Q9P2H0 1117 aa8□□□□□ -1.13
SDF2-205ENST00000587629 SUGT1Q9Y2Z0 365 aa8□□□□□ -1.13
SDF2-205ENST00000587629 DAGLAQ9Y4D2 1042 aa8□□□□□ -1.13
SDF2-205ENST00000587629 LRRFIP2Q9Y608 721 aaKnown RBP8□□□□□ -1.13
SDF2-205ENST00000587629 TLR2O60603 784 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 LDHBP07195 334 aaKnown RBP7.99□□□□□ -1.13
SDF2-205ENST00000587629 ADORA1P30542 326 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 PHKA1P46020 1223 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 PPIL2Q13356 520 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 KIF22Q14807 665 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 ARHGEF6Q15052 776 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 ALDH1L2Q3SY69 923 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 NBPF11Q86T75 865 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 FAM151AQ8WW52 585 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 ARAP2Q8WZ64 1704 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 ZNF333Q96JL9 665 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 GNL3LQ9NVN8 582 aaKnown RBP7.99□□□□□ -1.13
SDF2-205ENST00000587629 CPA4Q9UI42 421 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 METRNQ9UJH8 293 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 KIF16BQ96L93 1317 aa7.99□□□□□ -1.13
SDF2-205ENST00000587629 MKI67P46013 3256 aaKnown RBP7.98□□□□□ -1.13
SDF2-205ENST00000587629 PDHXO00330 501 aa7.98□□□□□ -1.13
SDF2-205ENST00000587629 CIAO1O76071 339 aa7.98□□□□□ -1.13
SDF2-205ENST00000587629 SLURP2P0DP57 97 aa7.98□□□□□ -1.13
SDF2-205ENST00000587629 TIMM10P62072 90 aa7.98□□□□□ -1.13
SDF2-205ENST00000587629 LACTBP83111 547 aaPredicted RBP7.98□□□□□ -1.13
SDF2-205ENST00000587629 PPATQ06203 517 aa7.98□□□□□ -1.13
SDF2-205ENST00000587629 ZSCAN29Q8IWY8 852 aaPredicted RBP7.98□□□□□ -1.13
SDF2-205ENST00000587629 MEIS3Q99687 375 aa7.98□□□□□ -1.13
SDF2-205ENST00000587629 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
SDF2-205ENST00000587629 ABCF2Q9UG63 623 aa7.98□□□□□ -1.13
SDF2-205ENST00000587629 BRCA2P51587 3418 aa7.97□□□□□ -1.13
SDF2-205ENST00000587629 FMNL1O95466 1100 aaPredicted RBP7.97□□□□□ -1.13
SDF2-205ENST00000587629 CTGFP29279 349 aa7.97□□□□□ -1.13
SDF2-205ENST00000587629 IL15P40933 162 aaPredicted RBP7.97□□□□□ -1.13
SDF2-205ENST00000587629 PSMC4P43686 418 aa7.97□□□□□ -1.13
SDF2-205ENST00000587629 RGS3P49796 1198 aa7.97□□□□□ -1.13
SDF2-205ENST00000587629 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms