RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TBC1D22AQ8WUA7 517 aa23.43■■□□□ 1.34
TRIM47-204ENST00000587339 CRNKL1Q9BZJ0 848 aaKnown RBP23.43■■□□□ 1.34
TRIM47-204ENST00000587339 DDX11L8A8MPP1 907 aa23.42■■□□□ 1.34
TRIM47-204ENST00000587339 ANTXR2P58335 489 aa23.42■■□□□ 1.34
TRIM47-204ENST00000587339 AKNAD1Q5T1N1 836 aa23.42■■□□□ 1.34
TRIM47-204ENST00000587339 CNNM2Q9H8M5 875 aa23.42■■□□□ 1.34
TRIM47-204ENST00000587339 NEDD4P46934 1319 aa23.42■■□□□ 1.34
TRIM47-204ENST00000587339 B4E1Z4 1266 aa23.41■■□□□ 1.34
TRIM47-204ENST00000587339 GRIK5Q16478 980 aa23.41■■□□□ 1.34
TRIM47-204ENST00000587339 MFSD14BQ5SR56 506 aa23.41■■□□□ 1.34
TRIM47-204ENST00000587339 GIMAP6Q6P9H5 292 aa23.41■■□□□ 1.34
TRIM47-204ENST00000587339 MFSD6Q6ZSS7 791 aa23.41■■□□□ 1.34
TRIM47-204ENST00000587339 EYA3Q99504 573 aa23.41■■□□□ 1.34
TRIM47-204ENST00000587339 WDR33Q9C0J8 1336 aaKnown RBP23.41■■□□□ 1.34
TRIM47-204ENST00000587339 PPARAQ07869 468 aa23.41■■□□□ 1.34
TRIM47-204ENST00000587339 ZNF274Q96GC6 653 aaPredicted RBP23.41■■□□□ 1.34
TRIM47-204ENST00000587339 FAM205AQ6ZU69 1335 aa23.4■■□□□ 1.34
TRIM47-204ENST00000587339 PFKFB2O60825 505 aa23.4■■□□□ 1.34
TRIM47-204ENST00000587339 LDHCP07864 332 aa23.4■■□□□ 1.34
TRIM47-204ENST00000587339 DIXDC1Q155Q3 683 aa23.4■■□□□ 1.34
TRIM47-204ENST00000587339 STAG1Q8WVM7 1258 aa23.4■■□□□ 1.34
TRIM47-204ENST00000587339 KRT23Q9C075 422 aa23.4■■□□□ 1.34
TRIM47-204ENST00000587339 TIAM2Q8IVF5 1701 aa23.4■■□□□ 1.34
TRIM47-204ENST00000587339 MINDY4BA8MYZ0 360 aa23.39■■□□□ 1.34
TRIM47-204ENST00000587339 BAG4O95429 457 aaKnown RBP23.39■■□□□ 1.34
TRIM47-204ENST00000587339 SYT1P21579 422 aa23.39■■□□□ 1.34
TRIM47-204ENST00000587339 EVCP57679 992 aa23.39■■□□□ 1.34
TRIM47-204ENST00000587339 GTF2IP78347 998 aa23.39■■□□□ 1.34
TRIM47-204ENST00000587339 FOXD4L5Q5VV16 416 aaPredicted RBP23.39■■□□□ 1.34
TRIM47-204ENST00000587339 FOXD4L4Q8WXT5 416 aaPredicted RBP23.39■■□□□ 1.34
TRIM47-204ENST00000587339 RNF41Q9H4P4 317 aaPredicted RBP23.39■■□□□ 1.34
TRIM47-204ENST00000587339 INCENPQ9NQS7 918 aa23.39■■□□□ 1.34
TRIM47-204ENST00000587339 NAP1L2Q9ULW6 460 aaPredicted RBP23.39■■□□□ 1.34
TRIM47-204ENST00000587339 C10orf71Q711Q0 1435 aa23.39■■□□□ 1.34
TRIM47-204ENST00000587339 G3V3G9 751 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 DTNBO60941 627 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 BAG3O95817 575 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 SCRN1Q12765 414 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 DCAF8Q5TAQ9 597 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 CYB5R4Q7L1T6 521 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 NOL10Q9BSC4 688 aaKnown RBP23.39■■□□□ 1.33
TRIM47-204ENST00000587339 GPHNQ9NQX3 736 aaPredicted RBP23.39■■□□□ 1.33
TRIM47-204ENST00000587339 ATP8A2Q9NTI2 1148 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 ANAPC4Q9UJX5 808 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 KIAA1551Q9HCM1 1747 aa23.39■■□□□ 1.33
TRIM47-204ENST00000587339 STX6O43752 255 aa23.38■■□□□ 1.33
TRIM47-204ENST00000587339 PDIA3P30101 505 aaKnown RBP23.38■■□□□ 1.33
TRIM47-204ENST00000587339 ZNF219Q9P2Y4 722 aaPredicted RBP23.38■■□□□ 1.33
TRIM47-204ENST00000587339 SLX4Q8IY92 1834 aa23.38■■□□□ 1.33
TRIM47-204ENST00000587339 GOLGA6L22H0YM25 854 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 DOK7Q18PE1 504 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 NKX2-3Q8TAU0 364 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 TMEM87BQ96K49 555 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 DCP1AQ9NPI6 582 aaPredicted RBP23.37■■□□□ 1.33
TRIM47-204ENST00000587339 TOMM22Q9NS69 142 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 ANGEL1Q9UNK9 670 aaKnown RBP23.37■■□□□ 1.33
TRIM47-204ENST00000587339 MROH7-TTC4A0A0A0MT08 1334 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 KDM4AO75164 1064 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 ZSWIM5Q9P217 1185 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 TACC3Q9Y6A5 838 aa23.37■■□□□ 1.33
TRIM47-204ENST00000587339 RRP12Q5JTH9 1297 aaKnown RBP23.36■■□□□ 1.33
TRIM47-204ENST00000587339 CTR9Q6PD62 1173 aa23.36■■□□□ 1.33
TRIM47-204ENST00000587339 SLF2Q8IX21 1173 aa23.36■■□□□ 1.33
TRIM47-204ENST00000587339 STK11IPQ8N1F8 1099 aa23.36■■□□□ 1.33
TRIM47-204ENST00000587339 C7orf43Q8WVR3 580 aa23.36■■□□□ 1.33
TRIM47-204ENST00000587339 CHMP4CQ96CF2 233 aa23.36■■□□□ 1.33
TRIM47-204ENST00000587339 USP17L12C9JPN9 530 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 USP17L21D6R901 530 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 PDIA4P13667 645 aaKnown RBP23.35■■□□□ 1.33
TRIM47-204ENST00000587339 PDCP20941 246 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 PPP4CP60510 307 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 CCT2P78371 535 aaKnown RBP23.35■■□□□ 1.33
TRIM47-204ENST00000587339 FBXW7Q969H0 707 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 LLPHQ9BRT6 129 aaKnown RBP23.35■■□□□ 1.33
TRIM47-204ENST00000587339 KLF18A0A0U1RQI7 1052 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 CC2D2BQ6DHV5 1058 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 CERS3Q8IU89 383 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 RTFDC1Q9BY42 306 aaPredicted RBP23.35■■□□□ 1.33
TRIM47-204ENST00000587339 BRPF3Q9ULD4 1205 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 CHD4Q14839 1912 aa23.35■■□□□ 1.33
TRIM47-204ENST00000587339 SH2B2O14492 632 aaPredicted RBP23.34■■□□□ 1.33
TRIM47-204ENST00000587339 ZSCAN22P10073 491 aaPredicted RBP23.34■■□□□ 1.33
TRIM47-204ENST00000587339 LARP1BQ659C4 914 aaKnown RBP23.34■■□□□ 1.33
TRIM47-204ENST00000587339 PODNQ7Z5L7 613 aa23.34■■□□□ 1.33
TRIM47-204ENST00000587339 ARPP21Q9UBL0 812 aaPredicted RBP23.34■■□□□ 1.33
TRIM47-204ENST00000587339 SUGT1Q9Y2Z0 365 aa23.34■■□□□ 1.33
TRIM47-204ENST00000587339 CYP2D7A0A087X1C5 515 aa23.33■■□□□ 1.33
TRIM47-204ENST00000587339 PTMSP20962 102 aa23.33■■□□□ 1.33
TRIM47-204ENST00000587339 MCTP1Q6DN14 999 aa23.33■■□□□ 1.33
TRIM47-204ENST00000587339 SH3RF3Q8TEJ3 882 aaPredicted RBP23.33■■□□□ 1.33
TRIM47-204ENST00000587339 GOLGA8BA8MQT2 603 aa23.33■■□□□ 1.32
TRIM47-204ENST00000587339 JAK2O60674 1132 aa23.33■■□□□ 1.32
TRIM47-204ENST00000587339 USP5P45974 858 aa23.33■■□□□ 1.32
TRIM47-204ENST00000587339 IGDCC4Q8TDY8 1250 aa23.33■■□□□ 1.32
TRIM47-204ENST00000587339 FAM163AQ96GL9 167 aaPredicted RBP23.33■■□□□ 1.32
TRIM47-204ENST00000587339 NCOA5Q9HCD5 579 aaKnown RBP23.33■■□□□ 1.32
TRIM47-204ENST00000587339 BAZ2AQ9UIF9 1905 aaKnown RBP23.33■■□□□ 1.32
TRIM47-204ENST00000587339 GPR75-ASB3A0A0A6YYF3 556 aa23.32■■□□□ 1.32
TRIM47-204ENST00000587339 PCP11498 1178 aaKnown RBP23.32■■□□□ 1.32
TRIM47-204ENST00000587339 BTDP43251 543 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms