RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 OTUD5Q96G74 571 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 WRNIP1Q96S55 665 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 CFHR5Q9BXR6 569 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 ABCF2Q9UG63 623 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 DAGLAQ9Y4D2 1042 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 AK9Q5TCS8 1911 aa13.17□□□□□ -0.3
ZNF540-205ENST00000587220 SALL1Q9NSC2 1324 aa13.17□□□□□ -0.3
ZNF540-205ENST00000587220 IGF2BP3O00425 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZNF540-205ENST00000587220 GJA5P36382 358 aa13.17□□□□□ -0.3
ZNF540-205ENST00000587220 TCP10Q12799 353 aa13.17□□□□□ -0.3
ZNF540-205ENST00000587220 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZNF540-205ENST00000587220 RASGRF1Q13972 1273 aa13.17□□□□□ -0.3
ZNF540-205ENST00000587220 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.17□□□□□ -0.3
ZNF540-205ENST00000587220 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
ZNF540-205ENST00000587220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZNF540-205ENST00000587220 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
ZNF540-205ENST00000587220 USP40Q9NVE5 1235 aa13.17□□□□□ -0.3
ZNF540-205ENST00000587220 GTF2A2P52657 109 aa13.16□□□□□ -0.3
ZNF540-205ENST00000587220 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
ZNF540-205ENST00000587220 SPTY2D1Q68D10 685 aaPredicted RBP13.16□□□□□ -0.3
ZNF540-205ENST00000587220 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
ZNF540-205ENST00000587220 ITPRIPQ8IWB1 547 aa13.16□□□□□ -0.3
ZNF540-205ENST00000587220 FAM151AQ8WW52 585 aa13.16□□□□□ -0.3
ZNF540-205ENST00000587220 R3HDMLQ9H3Y0 253 aa13.16□□□□□ -0.3
ZNF540-205ENST00000587220 RPAP1Q9BWH6 1393 aaPredicted RBP13.16□□□□□ -0.3
ZNF540-205ENST00000587220 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 PNMA6EA0A0J9YXQ4 647 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 WDHD1O75717 1129 aaPredicted RBP13.15□□□□□ -0.3
ZNF540-205ENST00000587220 CRHR2Q13324 411 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 CCL15Q16663 113 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 MIGA2Q7L4E1 593 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
ZNF540-205ENST00000587220 ZNF341Q9BYN7 854 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 MYH2Q9UKX2 1941 aa13.15□□□□□ -0.3
ZNF540-205ENST00000587220 PDS5AQ29RF7 1337 aaKnown RBP13.14□□□□□ -0.31
ZNF540-205ENST00000587220 TESPA1A2RU30 521 aaPredicted RBP13.14□□□□□ -0.31
ZNF540-205ENST00000587220 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
ZNF540-205ENST00000587220 RGS19P49795 217 aa13.14□□□□□ -0.31
ZNF540-205ENST00000587220 SOX10P56693 466 aa13.14□□□□□ -0.31
ZNF540-205ENST00000587220 NFIAQ12857 509 aa13.14□□□□□ -0.31
ZNF540-205ENST00000587220 FBXO46Q6PJ61 603 aaPredicted RBP13.14□□□□□ -0.31
ZNF540-205ENST00000587220 ERICH6Q7L0X2 663 aa13.14□□□□□ -0.31
ZNF540-205ENST00000587220 ERO1BQ86YB8 467 aa13.14□□□□□ -0.31
ZNF540-205ENST00000587220 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
ZNF540-205ENST00000587220 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 ZBTB22O15209 634 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 CETPP11597 493 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 ZSCAN29Q8IWY8 852 aaPredicted RBP13.13□□□□□ -0.31
ZNF540-205ENST00000587220 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 PTPN18Q99952 460 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 C1orf115Q9H7X2 142 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 TRIM17Q9Y577 477 aa13.13□□□□□ -0.31
ZNF540-205ENST00000587220 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
ZNF540-205ENST00000587220 BTDP43251 543 aa13.12□□□□□ -0.31
ZNF540-205ENST00000587220 GSTO1P78417 241 aa13.12□□□□□ -0.31
ZNF540-205ENST00000587220 SNAPC2Q13487 334 aa13.12□□□□□ -0.31
ZNF540-205ENST00000587220 TAF1CQ15572 869 aaPredicted RBP13.12□□□□□ -0.31
ZNF540-205ENST00000587220 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
ZNF540-205ENST00000587220 ZFYVE28Q9HCC9 887 aa13.12□□□□□ -0.31
ZNF540-205ENST00000587220 FAM198AQ9UFP1 575 aa13.12□□□□□ -0.31
ZNF540-205ENST00000587220 GAKO14976 1311 aa13.12□□□□□ -0.31
ZNF540-205ENST00000587220 DOCK2Q92608 1830 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 IRF6O14896 467 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 ENTPD3O75355 529 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 RGS3P49796 1198 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 SP3Q02447 781 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 MECOMQ03112 1051 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 PPIL2Q13356 520 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 PICALMQ13492 652 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 CD99L2Q8TCZ2 262 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.11□□□□□ -0.31
ZNF540-205ENST00000587220 MROH7-TTC4A0A0A0MT08 1334 aa13.11□□□□□ -0.31
ZNF540-205ENST00000587220 LDHCP07864 332 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 ARID4AP29374 1257 aaPredicted RBP13.1□□□□□ -0.31
ZNF540-205ENST00000587220 INPP5BP32019 993 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 PPATQ06203 517 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 CCDC158Q5M9N0 1113 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 PI16Q6UXB8 463 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 OTOP1Q7RTM1 612 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 SSH3Q8TE77 659 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 FAM163AQ96GL9 167 aaPredicted RBP13.1□□□□□ -0.31
ZNF540-205ENST00000587220 NOL10Q9BSC4 688 aaKnown RBP13.1□□□□□ -0.31
ZNF540-205ENST00000587220 IDI2Q9BXS1 227 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 LRP2BPQ9P2M1 347 aa13.1□□□□□ -0.31
ZNF540-205ENST00000587220 RLBP1P12271 317 aa13.09□□□□□ -0.31
ZNF540-205ENST00000587220 POLA2Q14181 598 aa13.09□□□□□ -0.31
ZNF540-205ENST00000587220 TNNI3KQ59H18 835 aa13.09□□□□□ -0.31
ZNF540-205ENST00000587220 TBC1D9Q6ZT07 1266 aa13.09□□□□□ -0.31
ZNF540-205ENST00000587220 ZFPM1Q8IX07 1006 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms