RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 BBOX1O75936 387 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 MBD4O95243 580 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 CYP21A2P08686 494 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
APOC1-201ENST00000586638 SCNN1DP51172 638 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 GRM1Q13255 1194 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 COL9A3Q14050 684 aaPredicted RBP12.14□□□□□ -0.47
APOC1-201ENST00000586638 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 CST9Q5W186 159 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 TMC4Q7Z404 712 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 NIM1KQ8IY84 436 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 TTC14Q96N46 770 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 LRP2BPQ9P2M1 347 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
APOC1-201ENST00000586638 NAV1Q8NEY1 1877 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 TRAF5O00463 557 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 CYP4F22Q6NT55 531 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 C15orf52Q6ZUT6 534 aaKnown RBP12.13□□□□□ -0.47
APOC1-201ENST00000586638 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 TBC1D16Q8TBP0 767 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 VPS33BQ9H267 617 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 ATP6V0A2Q9Y487 856 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
APOC1-201ENST00000586638 BAZ2AQ9UIF9 1905 aaKnown RBP12.13□□□□□ -0.47
APOC1-201ENST00000586638 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
APOC1-201ENST00000586638 PPIP5K2O43314 1243 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 HSP90AA1P07900 732 aaKnown RBP12.12□□□□□ -0.47
APOC1-201ENST00000586638 CYP7A1P22680 504 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 AK2P54819 239 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 TTLL5Q6EMB2 1281 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 ADGRA1Q86SQ6 560 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 SP8Q8IXZ3 490 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 LCORLQ8N3X6 602 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 TCEANC2Q96MN5 208 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 TM6SF1Q9BZW5 370 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 ZSWIM6Q9HCJ5 1215 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
APOC1-201ENST00000586638 ADAMTSL1Q8N6G6 1762 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 CDK5RAP2Q96SN8 1893 aa12.12□□□□□ -0.47
APOC1-201ENST00000586638 SNED1Q8TER0 1413 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 CCDC85CA6NKD9 419 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 C6orf229H3BNL8 230 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 PRDX5P30044 214 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 MAP2K2P36507 400 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 HAND2P61296 217 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 AOC3Q16853 763 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 BLOC1S2Q6QNY1 142 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 MIGA1Q8NAN2 632 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 SUPT20HQ8NEM7 779 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 TDRD7Q8NHU6 1098 aaKnown RBP12.11□□□□□ -0.47
APOC1-201ENST00000586638 EPB41L4AQ9HCS5 686 aaPredicted RBP12.11□□□□□ -0.47
APOC1-201ENST00000586638 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 GPRC5DQ9NZD1 345 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 ZNRF3Q9ULT6 936 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 TLL2Q9Y6L7 1015 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 PDE4DIPQ5VU43 2346 aa12.11□□□□□ -0.47
APOC1-201ENST00000586638 LARGE1O95461 756 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 PSMA5P28066 241 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 MCM2P49736 904 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 CXCL9Q07325 125 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 KRT32Q14532 448 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 TSGA10IPQ3SY00 556 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 ZNF384Q8TF68 577 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 TMX3Q96JJ7 454 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
APOC1-201ENST00000586638 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
APOC1-201ENST00000586638 CD209Q9NNX6 404 aa12.1□□□□□ -0.47
APOC1-201ENST00000586638 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 ZBTB22O15209 634 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 PRKAB2O43741 272 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 AOC2O75106 756 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
APOC1-201ENST00000586638 DDIT3P35638 169 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
APOC1-201ENST00000586638 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
APOC1-201ENST00000586638 DPP8Q6V1X1 898 aaPredicted RBP12.09□□□□□ -0.47
APOC1-201ENST00000586638 MPNDQ8N594 471 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
APOC1-201ENST00000586638 NSUN4Q96CB9 384 aaKnown RBP12.09□□□□□ -0.47
APOC1-201ENST00000586638 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 PGAP2Q9UHJ9 254 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
APOC1-201ENST00000586638 COL4A5P29400 1685 aa12.08□□□□□ -0.48
APOC1-201ENST00000586638 MAGEB6P1A0A0J9YX57 407 aa12.08□□□□□ -0.48
APOC1-201ENST00000586638 E7EWF7 191 aa12.08□□□□□ -0.48
APOC1-201ENST00000586638 FGAP02671 866 aa12.08□□□□□ -0.48
APOC1-201ENST00000586638 APPP05067 770 aa12.08□□□□□ -0.48
APOC1-201ENST00000586638 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
APOC1-201ENST00000586638 MLLT1Q03111 559 aaPredicted RBP12.08□□□□□ -0.48
APOC1-201ENST00000586638 MECOMQ03112 1051 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms