RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
MBD3-203ENST00000585903 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
MBD3-203ENST00000585903 ZFYVE28Q9HCC9 887 aa13.2□□□□□ -0.3
MBD3-203ENST00000585903 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
MBD3-203ENST00000585903 CCL15-CCL14A0A0B4J2E2 113 aa13.19□□□□□ -0.3
MBD3-203ENST00000585903 IL15P40933 162 aaPredicted RBP13.19□□□□□ -0.3
MBD3-203ENST00000585903 PPIL2Q13356 520 aa13.19□□□□□ -0.3
MBD3-203ENST00000585903 SNAPC2Q13487 334 aa13.19□□□□□ -0.3
MBD3-203ENST00000585903 CCL15Q16663 113 aa13.19□□□□□ -0.3
MBD3-203ENST00000585903 ZGPATQ8N5A5 531 aaKnown RBP13.19□□□□□ -0.3
MBD3-203ENST00000585903 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
MBD3-203ENST00000585903 FAM151AQ8WW52 585 aa13.19□□□□□ -0.3
MBD3-203ENST00000585903 CEP126Q9P2H0 1117 aa13.19□□□□□ -0.3
MBD3-203ENST00000585903 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
MBD3-203ENST00000585903 PPATQ06203 517 aa13.18□□□□□ -0.3
MBD3-203ENST00000585903 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
MBD3-203ENST00000585903 WRNIP1Q96S55 665 aa13.18□□□□□ -0.3
MBD3-203ENST00000585903 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
MBD3-203ENST00000585903 COPRSQ9NQ92 184 aa13.18□□□□□ -0.3
MBD3-203ENST00000585903 ZNF112Q9UJU3 913 aa13.18□□□□□ -0.3
MBD3-203ENST00000585903 DENND2AQ9ULE3 1009 aa13.18□□□□□ -0.3
MBD3-203ENST00000585903 SNCAIPQ9Y6H5 919 aa13.18□□□□□ -0.3
MBD3-203ENST00000585903 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 TLR2O60603 784 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 PRMT2P55345 433 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 MTX1Q13505 466 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
MBD3-203ENST00000585903 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 NOL9Q5SY16 702 aaKnown RBP13.17□□□□□ -0.3
MBD3-203ENST00000585903 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 DAGLAQ9Y4D2 1042 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
MBD3-203ENST00000585903 AK9Q5TCS8 1911 aa13.16□□□□□ -0.3
MBD3-203ENST00000585903 LDHBP07195 334 aaKnown RBP13.16□□□□□ -0.3
MBD3-203ENST00000585903 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
MBD3-203ENST00000585903 KCNH4Q9UQ05 1017 aa13.16□□□□□ -0.3
MBD3-203ENST00000585903 IRF6O14896 467 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
MBD3-203ENST00000585903 GNAI3P08754 354 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 KIF22Q14807 665 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
MBD3-203ENST00000585903 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 ZNF333Q96JL9 665 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 IDI2Q9BXS1 227 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
MBD3-203ENST00000585903 DOCK2Q92608 1830 aa13.15□□□□□ -0.3
MBD3-203ENST00000585903 GAKO14976 1311 aa13.14□□□□□ -0.31
MBD3-203ENST00000585903 ENTPD3O75355 529 aa13.14□□□□□ -0.31
MBD3-203ENST00000585903 PRDX5P30044 214 aa13.14□□□□□ -0.31
MBD3-203ENST00000585903 CACNB3P54284 484 aa13.14□□□□□ -0.31
MBD3-203ENST00000585903 LACTBP83111 547 aaPredicted RBP13.14□□□□□ -0.31
MBD3-203ENST00000585903 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
MBD3-203ENST00000585903 ANKRD23Q86SG2 305 aa13.14□□□□□ -0.31
MBD3-203ENST00000585903 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
MBD3-203ENST00000585903 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
MBD3-203ENST00000585903 BTBD19C9JJ37 291 aa13.13□□□□□ -0.31
MBD3-203ENST00000585903 IGSF3O75054 1194 aa13.13□□□□□ -0.31
MBD3-203ENST00000585903 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
MBD3-203ENST00000585903 RARSP54136 660 aaKnown RBP13.13□□□□□ -0.31
MBD3-203ENST00000585903 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
MBD3-203ENST00000585903 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
MBD3-203ENST00000585903 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
MBD3-203ENST00000585903 ATRNL1Q5VV63 1379 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 CXCL11O14625 94 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
MBD3-203ENST00000585903 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
MBD3-203ENST00000585903 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 CCDC102BQ68D86 513 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 C17orf99Q6UX52 265 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 SIL1Q9H173 461 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
MBD3-203ENST00000585903 FAM198AQ9UFP1 575 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
MBD3-203ENST00000585903 SLC45A1Q9Y2W3 748 aa13.12□□□□□ -0.31
MBD3-203ENST00000585903 COL2A1P02458 1487 aaPredicted RBP13.11□□□□□ -0.31
MBD3-203ENST00000585903 CAPN2P17655 700 aa13.11□□□□□ -0.31
MBD3-203ENST00000585903 PHKA1P46020 1223 aa13.11□□□□□ -0.31
MBD3-203ENST00000585903 CAP1Q01518 475 aa13.11□□□□□ -0.31
MBD3-203ENST00000585903 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
MBD3-203ENST00000585903 PTPRFP10586 1907 aa13.11□□□□□ -0.31
MBD3-203ENST00000585903 ADGRA2Q96PE1 1338 aa13.11□□□□□ -0.31
MBD3-203ENST00000585903 PHF20L1A8MW92 1017 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 HOXD10P28358 340 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 INPP5BP32019 993 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 NFIAQ12857 509 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 RASGRF1Q13972 1273 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 MEIS3Q99687 375 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 PTCH2Q9Y6C5 1203 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 DOCK1Q14185 1865 aa13.1□□□□□ -0.31
MBD3-203ENST00000585903 A0A1B0GUL7 405 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 PDHXO00330 501 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms