RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CYP2E1P05181 493 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 ATP5JP18859 108 aa16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 ZAP70P43403 619 aa16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 MECOMQ03112 1051 aa16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 MAP3K12Q12852 859 aa16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 DIXDC1Q155Q3 683 aa16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 CCDC102AQ96A19 550 aa16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 IDI2Q9BXS1 227 aa16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 COL2A1P02458 1487 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 APBB1O00213 710 aa16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 ENTPD3O75355 529 aa16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 MAP2K2P36507 400 aa16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 FMR1Q06787 632 aaKnown RBP eCLIP16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 RGMBQ6NW40 437 aa16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 FAM151AQ8WW52 585 aa16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 MKRN1Q9UHC7 482 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 PCDHAC2Q9Y5I4 1007 aa16.81■□□□□ 0.28
PRKCSH-202ENST00000585540 RFX7Q2KHR2 1363 aa16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 TTC41PQ6P2S7 1318 aa16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 WDR33Q9C0J8 1336 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 IREB2P48200 963 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 HTRA3P83110 453 aa16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 NOGQ13253 232 aa16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 NAA16Q6N069 864 aaPredicted RBP16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 PI16Q6UXB8 463 aa16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 CAPNS2Q96L46 248 aa16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 ECHDC1Q9NTX5 307 aa16.8■□□□□ 0.28
PRKCSH-202ENST00000585540 TCP10L2B9ZVM9 353 aa16.79■□□□□ 0.28
PRKCSH-202ENST00000585540 ERC2O15083 957 aa16.79■□□□□ 0.28
PRKCSH-202ENST00000585540 BTDP43251 543 aa16.79■□□□□ 0.28
PRKCSH-202ENST00000585540 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-202ENST00000585540 DCAF15Q66K64 600 aa16.79■□□□□ 0.28
PRKCSH-202ENST00000585540 USP40Q9NVE5 1235 aa16.79■□□□□ 0.28
PRKCSH-202ENST00000585540 VEGFBP49765 207 aa16.78■□□□□ 0.28
PRKCSH-202ENST00000585540 PPP4CP60510 307 aa16.78■□□□□ 0.28
PRKCSH-202ENST00000585540 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-202ENST00000585540 LRRFIP1Q32MZ4 808 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-202ENST00000585540 PAXIP1Q6ZW49 1069 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-202ENST00000585540 TEPSINQ96N21 525 aa16.78■□□□□ 0.28
PRKCSH-202ENST00000585540 HAUS7Q99871 368 aa16.78■□□□□ 0.28
PRKCSH-202ENST00000585540 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.78■□□□□ 0.281e-8■■□□□ 13.5
PRKCSH-202ENST00000585540 SNRKQ9NRH2 765 aa16.78■□□□□ 0.28
PRKCSH-202ENST00000585540 SSC5DA1L4H1 1573 aa16.77■□□□□ 0.28
PRKCSH-202ENST00000585540 IDH1O75874 414 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-202ENST00000585540 SLC10A3P09131 477 aa16.77■□□□□ 0.28
PRKCSH-202ENST00000585540 ZSCAN25Q6NSZ9 544 aa16.77■□□□□ 0.28
PRKCSH-202ENST00000585540 TBC1D9Q6ZT07 1266 aa16.77■□□□□ 0.28
PRKCSH-202ENST00000585540 PAG1Q9NWQ8 432 aa16.77■□□□□ 0.28
PRKCSH-202ENST00000585540 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.27
PRKCSH-202ENST00000585540 AOX1Q06278 1338 aa16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 ZNF157P51786 506 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 RHBDL3P58872 404 aa16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 NBPF12Q5TAG4 269 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 TICAM2Q86XR7 235 aa16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 SMC5Q8IY18 1101 aa16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 ANKRD13AQ8IZ07 590 aa16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 PIH1D3Q9NQM4 214 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-202ENST00000585540 CA12O43570 354 aa16.75■□□□□ 0.27
PRKCSH-202ENST00000585540 GLRX3O76003 335 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-202ENST00000585540 CYP4F22Q6NT55 531 aa16.75■□□□□ 0.27
PRKCSH-202ENST00000585540 ZNF384Q8TF68 577 aa16.75■□□□□ 0.27
PRKCSH-202ENST00000585540 DNAJC2Q99543 621 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-202ENST00000585540 TMEM39BQ9GZU3 492 aa16.75■□□□□ 0.27
PRKCSH-202ENST00000585540 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-202ENST00000585540 ANGEL1Q9UNK9 670 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-202ENST00000585540 LAMB1P07942 1786 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 WDHD1O75717 1129 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 RASAL3Q86YV0 1011 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 ZNF341Q9BYN7 854 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 BCL11AQ9H165 835 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 FAM198AQ9UFP1 575 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 TAOK2Q9UL54 1235 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 FOCADQ5VW36 1801 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 MYH7P12883 1935 aa16.74■□□□□ 0.27
PRKCSH-202ENST00000585540 GOLIM4O00461 696 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 ZBTB48P10074 688 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 MX1P20591 662 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 CYP7A1P22680 504 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 RGS3P49796 1198 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 ANKRD45Q5TZF3 282 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 PRAMEF18Q5VWM3 479 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 DLK2Q6UY11 383 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 TEX11Q8IYF3 940 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 MAGEB6Q8N7X4 407 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 AIDAQ96BJ3 306 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 BEGAINQ9BUH8 593 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 SCAF8Q9UPN6 1271 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 CSADQ9Y600 493 aa16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 MYO5AQ9Y4I1 1855 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-202ENST00000585540 FAM155AB1AL88 458 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 TBC1D12O60347 775 aa16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 USP2O75604 605 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 IGHDP01880 384 aa16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 CACNB3P54284 484 aa16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 NFIAQ12857 509 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms