RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	DCAF15	Q66K64	600 aa		20.4	■□□□□ 0.86
PRKAR1A-206	ENST00000585460	ARMC5	Q96C12	935 aa		20.4	■□□□□ 0.86
PRKAR1A-206	ENST00000585460	API5	Q9BZZ5	524 aa	Known RBP	20.4	■□□□□ 0.86
PRKAR1A-206	ENST00000585460	GNL3L	Q9NVN8	582 aa	Known RBP	20.4	■□□□□ 0.86
PRKAR1A-206	ENST00000585460	INPP5B	P32019	993 aa		20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	IL15	P40933	162 aa	Predicted RBP	20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	PHKA1	P46020	1223 aa		20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	TCP10	Q12799	353 aa		20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	NFIA	Q12857	509 aa		20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	SNAPC2	Q13487	334 aa		20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ZNF341	Q9BYN7	854 aa		20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	USP40	Q9NVE5	1235 aa		20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ZNF112	Q9UJU3	913 aa		20.39	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	LDHB	P07195	334 aa	Known RBP	20.38	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	PPIL2	Q13356	520 aa		20.38	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	MEIS3	Q99687	375 aa		20.38	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	COPRS	Q9NQ92	184 aa		20.38	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	FAM198A	Q9UFP1	575 aa		20.38	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	HDAC5	Q9UQL6	1122 aa		20.38	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	TLR2	O60603	784 aa		20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ADORA1	P30542	326 aa		20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	RARS	P54136	660 aa	Known RBP	20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	TIMM10	P62072	90 aa		20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	PPAT	Q06203	517 aa		20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ARHGEF6	Q15052	776 aa		20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ZFPM1	Q8IX07	1006 aa		20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ZCCHC17	Q9NP64	241 aa	Known RBP	20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	DENND2A	Q9ULE3	1009 aa		20.37	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	SALL1	Q9NSC2	1324 aa		20.36	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	EN2	P19622	333 aa	Predicted RBP	20.36	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	RPAP1	Q9BWH6	1393 aa	Predicted RBP	20.35	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	SEMA3E	O15041	775 aa		20.35	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ZBTB22	O15209	634 aa		20.35	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	WDHD1	O75717	1129 aa	Predicted RBP	20.35	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	CCDC102B	Q68D86	513 aa		20.35	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ARHGAP39	Q9C0H5	1083 aa		20.35	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	PTCH2	Q9Y6C5	1203 aa		20.35	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	HTT	P42858	3142 aa		20.34	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	20.34	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ARHGAP45	Q92619	1136 aa		20.34	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	ZNF333	Q96JL9	665 aa		20.34	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	C17orf99	Q6UX52	265 aa		20.33	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	KCNH4	Q9UQ05	1017 aa		20.33	■□□□□ 0.85
PRKAR1A-206	ENST00000585460	LACTB	P83111	547 aa	Predicted RBP	20.32	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	MOGS	Q13724	837 aa		20.32	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	NOL9	Q5SY16	702 aa	Known RBP	20.32	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ANKRD23	Q86SG2	305 aa		20.32	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	NBPF11	Q86T75	865 aa		20.32	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ARAP2	Q8WZ64	1704 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	PHF20L1	A8MW92	1017 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	TFCP2	Q12800	502 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	RASGRF1	Q13972	1273 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	KIF22	Q14807	665 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	SLC9C1	Q4G0N8	1177 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	FAM163A	Q96GL9	167 aa	Predicted RBP	20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	TMEM106C	Q9BVX2	250 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	IDI2	Q9BXS1	227 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	OTOF	Q9HC10	1997 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	LAMB1	P07942	1786 aa		20.31	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	CCER2	I3L3R5	266 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	PDHX	O00330	501 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	SRGAP3	O43295	1099 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ENTPD3	O75355	529 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	GNAI3	P08754	354 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	RGS3	P49796	1198 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	SH3BP5L	Q7L8J4	393 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ZGPAT	Q8N5A5	531 aa	Known RBP	20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	XAGE2	Q96GT9	111 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	CPA4	Q9UI42	421 aa		20.3	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	GAK	O14976	1311 aa		20.29	■□□□□ 0.84
PRKAR1A-206	ENST00000585460		A0A1B0GUL7	405 aa		20.29	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	CTGF	P29279	349 aa		20.29	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	MAP3K10	Q02779	954 aa		20.29	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	MTX1	Q13505	466 aa		20.29	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ABCF2	Q9UG63	623 aa		20.29	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	AKAP2	Q9Y2D5	859 aa		20.29	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	CXCL11	O14625	94 aa		20.28	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ECM2	O94769	699 aa	Predicted RBP	20.28	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	GNRH1	P01148	92 aa		20.28	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	GPAT2	Q6NUI2	795 aa		20.28	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	SH3TC2	Q8TF17	1288 aa		20.28	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	PDS5A	Q29RF7	1337 aa	Known RBP	20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ATRNL1	Q5VV63	1379 aa		20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	MYC	P01106	439 aa	Predicted RBP	20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	SLURP2	P0DP57	97 aa		20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	PSMC4	P43686	418 aa		20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	SLC4A8	Q2Y0W8	1093 aa		20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	SPTY2D1	Q68D10	685 aa	Predicted RBP	20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	DZIP1	Q86YF9	867 aa	Known RBP	20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	DDX4	Q9NQI0	724 aa	Known RBP	20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	TNN	Q9UQP3	1299 aa		20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ZHX2	Q9Y6X8	837 aa		20.27	■□□□□ 0.84
PRKAR1A-206	ENST00000585460	ADGRA2	Q96PE1	1338 aa		20.27	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	KIAA0100	Q14667	2235 aa	Known RBP	20.26	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	DDTL	A6NHG4	134 aa	Predicted RBP	20.26	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PRMT2	P55345	433 aa		20.26	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	SLF2	Q8IX21	1173 aa		20.26	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	ZNF384	Q8TF68	577 aa		20.26	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	TRIM47	Q96LD4	638 aa		20.26	■□□□□ 0.83

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms