RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 LIN7BQ9HAP6 207 aa7.78□□□□□ -1.16
CRLF3-206ENST00000585268 MIA2Q96PC5 1412 aa7.78□□□□□ -1.16
CRLF3-206ENST00000585268 PIP4K2BP78356 416 aa7.77□□□□□ -1.17
CRLF3-206ENST00000585268 SND1Q7KZF4 910 aaKnown RBP eCLIP7.77□□□□□ -1.17
CRLF3-206ENST00000585268 SEC31BQ9NQW1 1179 aa7.77□□□□□ -1.17
CRLF3-206ENST00000585268 KCNK4Q9NYG8 393 aa7.77□□□□□ -1.17
CRLF3-206ENST00000585268 C9orf84Q5VXU9 1444 aa7.77□□□□□ -1.17
CRLF3-206ENST00000585268 HECW2Q9P2P5 1572 aa7.76□□□□□ -1.17
CRLF3-206ENST00000585268 CD68P34810 354 aaPredicted RBP7.76□□□□□ -1.17
CRLF3-206ENST00000585268 GRIA4P48058 902 aa7.76□□□□□ -1.17
CRLF3-206ENST00000585268 FMR1Q06787 632 aaKnown RBP eCLIP7.76□□□□□ -1.17
CRLF3-206ENST00000585268 KLHL23Q8NBE8 558 aa7.76□□□□□ -1.17
CRLF3-206ENST00000585268 WNT8BQ93098 351 aa7.76□□□□□ -1.17
CRLF3-206ENST00000585268 MRPL18Q9H0U6 180 aaKnown RBP7.76□□□□□ -1.17
CRLF3-206ENST00000585268 TPSG1Q9NRR2 321 aa7.76□□□□□ -1.17
CRLF3-206ENST00000585268 FGD6Q6ZV73 1430 aa7.76□□□□□ -1.17
CRLF3-206ENST00000585268 DIP2CQ9Y2E4 1556 aa7.76□□□□□ -1.17
CRLF3-206ENST00000585268 SIGLEC1Q9BZZ2 1709 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 PNMA6FA0A0J9YX94 578 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 ADAM11O75078 769 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 WISP1O95388 367 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 TSPY4P0CV99 314 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 TSPY10P0CW01 314 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 NOS3P29474 1203 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 DOC2BQ14184 412 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 FAM50AQ14320 339 aaKnown RBP7.75□□□□□ -1.17
CRLF3-206ENST00000585268 ENOX2Q16206 610 aaKnown RBP7.75□□□□□ -1.17
CRLF3-206ENST00000585268 HGSNATQ68CP4 663 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.75□□□□□ -1.17
CRLF3-206ENST00000585268 ZSCAN29Q8IWY8 852 aaPredicted RBP7.75□□□□□ -1.17
CRLF3-206ENST00000585268 EPS8L3Q8TE67 593 aaKnown RBP7.75□□□□□ -1.17
CRLF3-206ENST00000585268 WFDC12Q8WWY7 111 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
CRLF3-206ENST00000585268 SLC7A3Q8WY07 619 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 KLHDC7BQ96G42 594 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 EHD4Q9H223 541 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 OSGEPQ9NPF4 335 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 RTEL1-TNFRSF6BF6WH68 1400 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 CCDC141Q6ZP82 1450 aa7.75□□□□□ -1.17
CRLF3-206ENST00000585268 ABCA6Q8N139 1617 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 KIDINS220Q9ULH0 1771 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 ATP7AQ04656 1500 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 A0A096LPE4 126 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 A0A1W2PPZ6 126 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 F8W735 103 aaPredicted RBP7.74□□□□□ -1.17
CRLF3-206ENST00000585268 SOX1O00570 391 aaPredicted RBP7.74□□□□□ -1.17
CRLF3-206ENST00000585268 DDX3YO15523 660 aaKnown RBP7.74□□□□□ -1.17
CRLF3-206ENST00000585268 IREB2P48200 963 aaKnown RBP7.74□□□□□ -1.17
CRLF3-206ENST00000585268 PLCB3Q01970 1234 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 IKBKEQ14164 716 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 SPRED3Q2MJR0 410 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 PI16Q6UXB8 463 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 TMEM130Q8N3G9 435 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 SSBP4Q9BWG4 385 aaPredicted RBP7.74□□□□□ -1.17
CRLF3-206ENST00000585268 ABCB6Q9NP58 842 aa7.74□□□□□ -1.17
CRLF3-206ENST00000585268 TCOF1Q13428 1488 aaKnown RBP7.74□□□□□ -1.17
CRLF3-206ENST00000585268 ARHGEF5Q12774 1597 aa7.73□□□□□ -1.17
CRLF3-206ENST00000585268 ABCC5O15440 1437 aa7.73□□□□□ -1.17
CRLF3-206ENST00000585268 ESRRAP11474 423 aaPredicted RBP7.73□□□□□ -1.17
CRLF3-206ENST00000585268 GRM2Q14416 872 aa7.73□□□□□ -1.17
CRLF3-206ENST00000585268 PRPF40BQ6NWY9 871 aaKnown RBP7.73□□□□□ -1.17
CRLF3-206ENST00000585268 GLIS3Q8NEA6 775 aa7.73□□□□□ -1.17
CRLF3-206ENST00000585268 MEGF10Q96KG7 1140 aa7.73□□□□□ -1.17
CRLF3-206ENST00000585268 AKTIPQ9H8T0 292 aa7.73□□□□□ -1.17
CRLF3-206ENST00000585268 PTPN23Q9H3S7 1636 aa7.73□□□□□ -1.17
CRLF3-206ENST00000585268 INO80Q9ULG1 1556 aaPredicted RBP7.72□□□□□ -1.17
CRLF3-206ENST00000585268 DAPK1P53355 1430 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 K7ELQ4 463 aaPredicted RBP7.72□□□□□ -1.17
CRLF3-206ENST00000585268 GADD45BO75293 160 aaPredicted RBP7.72□□□□□ -1.17
CRLF3-206ENST00000585268 ALX3O95076 343 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 FURINP09958 794 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 ITPKAP23677 461 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 MAPK8P45983 427 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 C19orf57Q0VDD7 668 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 Q6ZS46 218 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 AGGF1Q8N302 714 aaeCLIP7.72□□□□□ -1.17
CRLF3-206ENST00000585268 UBASH3BQ8TF42 649 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 CLEC4MQ9H2X3 399 aaPredicted RBP7.72□□□□□ -1.17
CRLF3-206ENST00000585268 SOX17Q9H6I2 414 aaPredicted RBP7.72□□□□□ -1.17
CRLF3-206ENST00000585268 A2MP01023 1474 aa7.72□□□□□ -1.17
CRLF3-206ENST00000585268 DHX29Q7Z478 1369 aaKnown RBP7.71□□□□□ -1.17
CRLF3-206ENST00000585268 REREQ9P2R6 1566 aa7.71□□□□□ -1.17
CRLF3-206ENST00000585268 ADAMTSL3P82987 1691 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 NLRP12P59046 1061 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 RSPO4Q2I0M5 234 aaPredicted RBP7.71□□□□□ -1.18
CRLF3-206ENST00000585268 NKAPLQ5M9Q1 402 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 GGT6Q6P531 493 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 KIAA1211Q6ZU35 1233 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 ACAD11Q709F0 780 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 SETDB2Q96T68 719 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 ZNF576Q9H609 170 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 RRP7BPQ9NSQ0 103 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 BCORL1Q5H9F3 1711 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 AGLP35573 1532 aa7.71□□□□□ -1.18
CRLF3-206ENST00000585268 PTPRMP28827 1452 aa7.7□□□□□ -1.18
CRLF3-206ENST00000585268 KIF3BO15066 747 aa7.7□□□□□ -1.18
CRLF3-206ENST00000585268 P4HBP07237 508 aaKnown RBP7.7□□□□□ -1.18
CRLF3-206ENST00000585268 ARL4DP49703 201 aa7.7□□□□□ -1.18
CRLF3-206ENST00000585268 CEBPAP49715 358 aaPredicted RBP7.7□□□□□ -1.18
CRLF3-206ENST00000585268 PCDH1Q08174 1060 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms