RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 LAMB1P07942 1786 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 A0A0D9SFI3 127 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 SPDYE2BA6NHP3 402 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 CHGBP05060 677 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 SPDYE6P0CI01 402 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 EPS15P42566 896 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 BTDP43251 543 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 KIF4BQ2VIQ3 1234 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 SLFNL1Q499Z3 407 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 APOBEC3HQ6NTF7 200 aaKnown RBP14.01□□□□□ -0.17
CDRT1-207ENST00000583965 ZBED3Q96IU2 234 aaPredicted RBP14.01□□□□□ -0.17
CDRT1-207ENST00000583965 PUS7LQ9H0K6 701 aaKnown RBP14.01□□□□□ -0.17
CDRT1-207ENST00000583965 MYH8P13535 1937 aa14.01□□□□□ -0.17
CDRT1-207ENST00000583965 SHTN1A0MZ66 631 aa14□□□□□ -0.17
CDRT1-207ENST00000583965 GPAA1O43292 621 aa14□□□□□ -0.17
CDRT1-207ENST00000583965 MYO1BO43795 1136 aa14□□□□□ -0.17
CDRT1-207ENST00000583965 MBD4O95243 580 aa14□□□□□ -0.17
CDRT1-207ENST00000583965 GNAT2P19087 354 aa14□□□□□ -0.17
CDRT1-207ENST00000583965 MIGA1Q8NAN2 632 aa14□□□□□ -0.17
CDRT1-207ENST00000583965 SEC62Q99442 399 aaKnown RBP14□□□□□ -0.17
CDRT1-207ENST00000583965 RIOK1Q9BRS2 568 aaKnown RBP14□□□□□ -0.17
CDRT1-207ENST00000583965 ESYT1Q9BSJ8 1104 aa14□□□□□ -0.17
CDRT1-207ENST00000583965 TSHZ2Q9NRE2 1034 aa14□□□□□ -0.17
CDRT1-207ENST00000583965 AATFQ9NY61 560 aaKnown RBP eCLIP14□□□□□ -0.17
CDRT1-207ENST00000583965 DDX60LQ5H9U9 1706 aaKnown RBP14□□□□□ -0.17
CDRT1-207ENST00000583965 RPAP1Q9BWH6 1393 aaPredicted RBP13.99□□□□□ -0.17
CDRT1-207ENST00000583965 CCDC171Q6TFL3 1326 aa13.99□□□□□ -0.17
CDRT1-207ENST00000583965 M0R2C6 588 aa13.99□□□□□ -0.17
CDRT1-207ENST00000583965 WNT10BO00744 389 aa13.99□□□□□ -0.17
CDRT1-207ENST00000583965 SGSM2O43147 1006 aa13.99□□□□□ -0.17
CDRT1-207ENST00000583965 USP50Q70EL3 339 aaPredicted RBP13.99□□□□□ -0.17
CDRT1-207ENST00000583965 SAMD7Q7Z3H4 446 aa13.99□□□□□ -0.17
CDRT1-207ENST00000583965 PRMT6Q96LA8 375 aaPredicted RBP13.99□□□□□ -0.17
CDRT1-207ENST00000583965 STRBPQ96SI9 672 aaKnown RBP13.99□□□□□ -0.17
CDRT1-207ENST00000583965 CRNKL1Q9BZJ0 848 aaKnown RBP13.99□□□□□ -0.17
CDRT1-207ENST00000583965 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
CDRT1-207ENST00000583965 EPHX2P34913 555 aa13.98□□□□□ -0.17
CDRT1-207ENST00000583965 RHBDL3P58872 404 aa13.98□□□□□ -0.17
CDRT1-207ENST00000583965 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
CDRT1-207ENST00000583965 TBC1D10BQ4KMP7 808 aaPredicted RBP13.98□□□□□ -0.17
CDRT1-207ENST00000583965 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
CDRT1-207ENST00000583965 ZNF589Q86UQ0 364 aaPredicted RBP13.98□□□□□ -0.17
CDRT1-207ENST00000583965 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
CDRT1-207ENST00000583965 LCORLQ8N3X6 602 aa13.98□□□□□ -0.17
CDRT1-207ENST00000583965 SH3RF3Q8TEJ3 882 aaPredicted RBP13.98□□□□□ -0.17
CDRT1-207ENST00000583965 ARMT1Q9H993 441 aa13.98□□□□□ -0.17
CDRT1-207ENST00000583965 USP40Q9NVE5 1235 aa13.98□□□□□ -0.17
CDRT1-207ENST00000583965 TMOD2Q9NZR1 351 aa13.98□□□□□ -0.17
CDRT1-207ENST00000583965 POTECB2RU33 542 aa13.97□□□□□ -0.17
CDRT1-207ENST00000583965 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
CDRT1-207ENST00000583965 EGFRP00533 1210 aa13.97□□□□□ -0.17
CDRT1-207ENST00000583965 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
CDRT1-207ENST00000583965 RBM26Q5T8P6 1007 aaKnown RBP13.97□□□□□ -0.17
CDRT1-207ENST00000583965 FKBP1CQ5VVH2 108 aa13.97□□□□□ -0.17
CDRT1-207ENST00000583965 TEX11Q8IYF3 940 aa13.97□□□□□ -0.17
CDRT1-207ENST00000583965 TRPM4Q8TD43 1214 aa13.97□□□□□ -0.17
CDRT1-207ENST00000583965 TAF1DQ9H5J8 278 aaPredicted RBP13.97□□□□□ -0.17
CDRT1-207ENST00000583965 TDRD3Q9H7E2 651 aaKnown RBP13.97□□□□□ -0.17
CDRT1-207ENST00000583965 ATP8A2Q9NTI2 1148 aa13.97□□□□□ -0.17
CDRT1-207ENST00000583965 ZNF70Q9UC06 446 aaPredicted RBP13.97□□□□□ -0.17
CDRT1-207ENST00000583965 PCDHAC2Q9Y5I4 1007 aa13.97□□□□□ -0.17
CDRT1-207ENST00000583965 PITPNM2Q9BZ72 1349 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 PATL2C9JE40 543 aaKnown RBP13.96□□□□□ -0.17
CDRT1-207ENST00000583965 REC8O95072 547 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 NBPF9Q3BBW0 867 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 C8orf34Q49A92 452 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 GIMAP6Q6P9H5 292 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 CCDC129Q6ZRS4 1044 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 ZC3H15Q8WU90 426 aaKnown RBP13.96□□□□□ -0.17
CDRT1-207ENST00000583965 DDRGK1Q96HY6 314 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 DSCC1Q9BVC3 393 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 IDI2Q9BXS1 227 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 IL25Q9H293 177 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 SLC4A4Q9Y6R1 1079 aa13.96□□□□□ -0.17
CDRT1-207ENST00000583965 COL2A1P02458 1487 aaPredicted RBP13.95□□□□□ -0.18
CDRT1-207ENST00000583965 EPB41L2O43491 1005 aaKnown RBP13.95□□□□□ -0.18
CDRT1-207ENST00000583965 WDHD1O75717 1129 aaPredicted RBP13.95□□□□□ -0.18
CDRT1-207ENST00000583965 HSPD1P10809 573 aaKnown RBP13.95□□□□□ -0.18
CDRT1-207ENST00000583965 USP5P45974 858 aa13.95□□□□□ -0.18
CDRT1-207ENST00000583965 HIRAP54198 1017 aaPredicted RBP13.95□□□□□ -0.18
CDRT1-207ENST00000583965 TNFAIP1Q13829 316 aa13.95□□□□□ -0.18
CDRT1-207ENST00000583965 ALX1Q15699 326 aa13.95□□□□□ -0.18
CDRT1-207ENST00000583965 APOBEC3FQ8IUX4 373 aaKnown RBP13.95□□□□□ -0.18
CDRT1-207ENST00000583965 TGFBRAP1Q8WUH2 860 aa13.95□□□□□ -0.18
CDRT1-207ENST00000583965 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
CDRT1-207ENST00000583965 RRAGCQ9HB90 399 aa13.95□□□□□ -0.18
CDRT1-207ENST00000583965 TRPM7Q96QT4 1865 aa13.95□□□□□ -0.18
CDRT1-207ENST00000583965 ZMYM6O95789 1325 aa13.94□□□□□ -0.18
CDRT1-207ENST00000583965 GSG1L2A8MUP6 293 aa13.94□□□□□ -0.18
CDRT1-207ENST00000583965 ENTPD3O75355 529 aa13.94□□□□□ -0.18
CDRT1-207ENST00000583965 TNNI2P48788 182 aa13.94□□□□□ -0.18
CDRT1-207ENST00000583965 FAM83AQ86UY5 434 aa13.94□□□□□ -0.18
CDRT1-207ENST00000583965 PGAP2Q9UHJ9 254 aa13.94□□□□□ -0.18
CDRT1-207ENST00000583965 SIPA1L1O43166 1804 aa13.94□□□□□ -0.18
CDRT1-207ENST00000583965 FLT1P17948 1338 aa13.93□□□□□ -0.18
CDRT1-207ENST00000583965 CLRN2A0PK11 232 aa13.93□□□□□ -0.18
CDRT1-207ENST00000583965 PRKAB2O43741 272 aa13.93□□□□□ -0.18
CDRT1-207ENST00000583965 APPP05067 770 aa13.93□□□□□ -0.18
CDRT1-207ENST00000583965 SDR42E1Q8WUS8 393 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms