RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 DKK1O94907 266 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 DDX58O95786 925 aaKnown RBP3.84□□□□□ -1.8
CCDC178-213ENST00000583930 ARID5BQ14865 1188 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 XP32Q5T750 250 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 SOGA3Q5TF21 947 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 CCDC102BQ68D86 513 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 MCM10Q7L590 875 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 SH3BP5LQ7L8J4 393 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 TTC5Q8N0Z6 440 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 ZBTB38Q8NAP3 1195 aaPredicted RBP3.84□□□□□ -1.8
CCDC178-213ENST00000583930 MRIQ9BWK5 157 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 DOLKQ9UPQ8 538 aa3.84□□□□□ -1.8
CCDC178-213ENST00000583930 DOCK1Q14185 1865 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 MED23Q9ULK4 1368 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 SCN9AQ15858 1988 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 MMP16P51512 607 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 PTK2Q05397 1052 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 ILDR2Q71H61 639 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 PSMD1Q99460 953 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 BRIP1Q9BX63 1249 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 TMPRSS4Q9NRS4 437 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 STK32BQ9NY57 414 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 PCDHB11Q9Y5F2 797 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 NEURL1BA8MQ27 555 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 H3BRB1 525 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 KCNQ2O43526 872 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 RFX5P48382 616 aaPredicted RBP3.83□□□□□ -1.8
CCDC178-213ENST00000583930 PDXDC2PQ6P474 469 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 ATF7IPQ6VMQ6 1270 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 SH3RF1Q7Z6J0 888 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.83□□□□□ -1.8
CCDC178-213ENST00000583930 TUT1Q9H6E5 874 aaKnown RBP3.83□□□□□ -1.8
CCDC178-213ENST00000583930 RAB6BQ9NRW1 208 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 DNAAF2Q9NVR5 837 aaKnown RBP3.83□□□□□ -1.8
CCDC178-213ENST00000583930 ZNF804BA4D1E1 1349 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 UBN2Q6ZU65 1347 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 KDM2BQ8NHM5 1336 aa3.83□□□□□ -1.8
CCDC178-213ENST00000583930 SH3BP2P78314 561 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 FOXO4P98177 505 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 EML3Q32P44 896 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 TJAP1Q5JTD0 557 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 NLRP10Q86W26 655 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 ZNF511Q8NB15 262 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 SSH3Q8TE77 659 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 SLC6A16Q9GZN6 736 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 COPRSQ9NQ92 184 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 ZBTB40Q9NUA8 1239 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 RNF19AQ9NV58 838 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 SALL2Q9Y467 1007 aaPredicted RBP3.82□□□□□ -1.8
CCDC178-213ENST00000583930 COL4A5P29400 1685 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 IGKV5-2P06315 115 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 EXOSC9Q06265 439 aaKnown RBP3.82□□□□□ -1.8
CCDC178-213ENST00000583930 OCLNQ16625 522 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 COL23A1Q86Y22 540 aaPredicted RBP3.82□□□□□ -1.8
CCDC178-213ENST00000583930 DNAJC10Q8IXB1 793 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 VGLL2Q8N8G2 317 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 OSBPL3Q9H4L5 887 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 KIAA1522Q9P206 1035 aaPredicted RBP3.82□□□□□ -1.8
CCDC178-213ENST00000583930 RTCBQ9Y3I0 505 aaKnown RBP3.82□□□□□ -1.8
CCDC178-213ENST00000583930 TLL2Q9Y6L7 1015 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 MYO5AQ9Y4I1 1855 aaKnown RBP3.82□□□□□ -1.8
CCDC178-213ENST00000583930 SSC5DA1L4H1 1573 aa3.82□□□□□ -1.8
CCDC178-213ENST00000583930 KCNQ3O43525 872 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 ADH1BP00325 375 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 KCNA3P22001 575 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 RRP1P56182 461 aaKnown RBP3.81□□□□□ -1.8
CCDC178-213ENST00000583930 FKBP5Q13451 457 aaPredicted RBP3.81□□□□□ -1.8
CCDC178-213ENST00000583930 GCKRQ14397 625 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 MSS51Q4VC12 460 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 ANKRD44Q8N8A2 993 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 DNAAF4Q8WXU2 420 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 SSH1Q8WYL5 1049 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 ZBTB1Q9Y2K1 713 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 SUGT1Q9Y2Z0 365 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 PCDHGA11Q9Y5H2 935 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 PTPRFP10586 1907 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 ZMYM6O95789 1325 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 MYH8P13535 1937 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 SKOR1P84550 965 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 MVPQ14764 893 aaKnown RBP3.81□□□□□ -1.8
CCDC178-213ENST00000583930 EZH2Q15910 746 aaKnown RBP3.81□□□□□ -1.8
CCDC178-213ENST00000583930 TRAPPC3LQ5T215 181 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 ZKSCAN2Q63HK3 967 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 DNAJC14Q6Y2X3 702 aaPredicted RBP3.81□□□□□ -1.8
CCDC178-213ENST00000583930 PPP1R42Q7Z4L9 355 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 RPAP2Q8IXW5 612 aaPredicted RBP3.81□□□□□ -1.8
CCDC178-213ENST00000583930 TSPYL6Q8N831 410 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.81□□□□□ -1.8
CCDC178-213ENST00000583930 KAZALD1Q96I82 304 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 USP16Q9Y5T5 823 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 TRIM37O94972 964 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 APBA3O96018 575 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 GNAI3P08754 354 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 FGFR2P21802 821 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 DDR1Q08345 913 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 KIF6Q6ZMV9 814 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 PTF1AQ7RTS3 328 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 PLEKHM2Q8IWE5 1019 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 SLC10A4Q96EP9 437 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 CYLDQ9NQC7 956 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms