RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 COA7Q96BR5 231 aa14.15□□□□□ -0.14
CASC3-208ENST00000583649 MAST3O60307 1309 aa14.15□□□□□ -0.15
CASC3-208ENST00000583649 CTGFP29279 349 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 FLT3LGP49771 235 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 BCAMP50895 628 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 LDHAL6AQ6ZMR3 332 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 TDRD7Q8NHU6 1098 aaKnown RBP14.14□□□□□ -0.15
CASC3-208ENST00000583649 NBPF3Q9H094 633 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 PAK6Q9NQU5 681 aaPredicted RBP14.14□□□□□ -0.15
CASC3-208ENST00000583649 TAOK2Q9UL54 1235 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 AOX1Q06278 1338 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 RPTORQ8N122 1335 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 IRS2Q9Y4H2 1338 aa14.14□□□□□ -0.15
CASC3-208ENST00000583649 CXCL11O14625 94 aa14.13□□□□□ -0.15
CASC3-208ENST00000583649 ZNF853P0CG23 659 aa14.13□□□□□ -0.15
CASC3-208ENST00000583649 UBE4AQ14139 1066 aa14.13□□□□□ -0.15
CASC3-208ENST00000583649 CDAN1Q8IWY9 1227 aa14.13□□□□□ -0.15
CASC3-208ENST00000583649 SMCR8Q8TEV9 937 aaPredicted RBP14.13□□□□□ -0.15
CASC3-208ENST00000583649 CRISPLD2Q9H0B8 497 aa14.13□□□□□ -0.15
CASC3-208ENST00000583649 ZMYND8Q9ULU4 1186 aaPredicted RBP14.13□□□□□ -0.15
CASC3-208ENST00000583649 KCNH4Q9UQ05 1017 aa14.13□□□□□ -0.15
CASC3-208ENST00000583649 SNAP23O00161 211 aa14.12□□□□□ -0.15
CASC3-208ENST00000583649 BCRP11274 1271 aa14.12□□□□□ -0.15
CASC3-208ENST00000583649 CAVIN4Q5BKX8 364 aa14.12□□□□□ -0.15
CASC3-208ENST00000583649 SYMPKQ92797 1274 aaKnown RBP14.12□□□□□ -0.15
CASC3-208ENST00000583649 MRIQ9BWK5 157 aa14.12□□□□□ -0.15
CASC3-208ENST00000583649 PRDM6Q9NQX0 595 aa14.12□□□□□ -0.15
CASC3-208ENST00000583649 GABRQQ9UN88 632 aa14.12□□□□□ -0.15
CASC3-208ENST00000583649 RPAP1Q9BWH6 1393 aaPredicted RBP14.11□□□□□ -0.15
CASC3-208ENST00000583649 ELNP15502 786 aa14.11□□□□□ -0.15
CASC3-208ENST00000583649 MAGEA10P43363 369 aaPredicted RBP14.11□□□□□ -0.15
CASC3-208ENST00000583649 FAM109BQ6ICB4 259 aaPredicted RBP14.11□□□□□ -0.15
CASC3-208ENST00000583649 LINS1Q8NG48 757 aa14.11□□□□□ -0.15
CASC3-208ENST00000583649 ZDHHC15Q96MV8 337 aa14.11□□□□□ -0.15
CASC3-208ENST00000583649 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.11□□□□□ -0.15
CASC3-208ENST00000583649 PICK1Q9NRD5 415 aa14.11□□□□□ -0.15
CASC3-208ENST00000583649 SLC45A1Q9Y2W3 748 aa14.11□□□□□ -0.15
CASC3-208ENST00000583649 SUGT1Q9Y2Z0 365 aa14.11□□□□□ -0.15
CASC3-208ENST00000583649 MIGA2Q7L4E1 593 aa14.1□□□□□ -0.15
CASC3-208ENST00000583649 C8orf58Q8NAV2 365 aa14.1□□□□□ -0.15
CASC3-208ENST00000583649 C11orf49Q9H6J7 331 aa14.1□□□□□ -0.15
CASC3-208ENST00000583649 HMX1Q9NP08 348 aaPredicted RBP14.1□□□□□ -0.15
CASC3-208ENST00000583649 ZSWIM8A7E2V4 1837 aa14.1□□□□□ -0.15
CASC3-208ENST00000583649 LAMA3Q16787 3333 aa14.1□□□□□ -0.15
CASC3-208ENST00000583649 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
CASC3-208ENST00000583649 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
CASC3-208ENST00000583649 CYP2C8P10632 490 aa14.09□□□□□ -0.15
CASC3-208ENST00000583649 GYG1P46976 350 aa14.09□□□□□ -0.15
CASC3-208ENST00000583649 CACNB3P54284 484 aa14.09□□□□□ -0.15
CASC3-208ENST00000583649 FKBP5Q13451 457 aaPredicted RBP14.09□□□□□ -0.15
CASC3-208ENST00000583649 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
CASC3-208ENST00000583649 HMGCRP04035 888 aa14.08□□□□□ -0.16
CASC3-208ENST00000583649 SYN1P17600 705 aa14.08□□□□□ -0.16
CASC3-208ENST00000583649 INPP5BP32019 993 aa14.08□□□□□ -0.16
CASC3-208ENST00000583649 CHAF1AQ13111 956 aaPredicted RBP14.08□□□□□ -0.16
CASC3-208ENST00000583649 NOL9Q5SY16 702 aaKnown RBP14.08□□□□□ -0.16
CASC3-208ENST00000583649 ZNF697Q5TEC3 545 aa14.08□□□□□ -0.16
CASC3-208ENST00000583649 FAM151AQ8WW52 585 aa14.08□□□□□ -0.16
CASC3-208ENST00000583649 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
CASC3-208ENST00000583649 LBHD1Q9BQE6 289 aaPredicted RBP14.08□□□□□ -0.16
CASC3-208ENST00000583649 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
CASC3-208ENST00000583649 CASP7P55210 303 aa14.07□□□□□ -0.16
CASC3-208ENST00000583649 GADL1Q6ZQY3 521 aa14.07□□□□□ -0.16
CASC3-208ENST00000583649 FAM84BQ96KN1 310 aaPredicted RBP14.07□□□□□ -0.16
CASC3-208ENST00000583649 ZNF112Q9UJU3 913 aa14.07□□□□□ -0.16
CASC3-208ENST00000583649 MYBBP1AQ9BQG0 1328 aaKnown RBP14.07□□□□□ -0.16
CASC3-208ENST00000583649 HHIPL2Q6UWX4 724 aa14.06□□□□□ -0.16
CASC3-208ENST00000583649 LMBR1LQ6UX01 489 aa14.06□□□□□ -0.16
CASC3-208ENST00000583649 DIS3LQ8TF46 1054 aaKnown RBP14.06□□□□□ -0.16
CASC3-208ENST00000583649 ADAMTS8Q9UP79 889 aa14.06□□□□□ -0.16
CASC3-208ENST00000583649 MROH5Q6ZUA9 1318 aa14.06□□□□□ -0.16
CASC3-208ENST00000583649 A0A0G2JLL6 359 aaPredicted RBP14.05□□□□□ -0.16
CASC3-208ENST00000583649 FOXO4P98177 505 aa14.05□□□□□ -0.16
CASC3-208ENST00000583649 FLIIQ13045 1269 aa14.05□□□□□ -0.16
CASC3-208ENST00000583649 GPAT2Q6NUI2 795 aa14.05□□□□□ -0.16
CASC3-208ENST00000583649 PRRT2Q7Z6L0 340 aaPredicted RBP14.05□□□□□ -0.16
CASC3-208ENST00000583649 ZHX2Q9Y6X8 837 aa14.05□□□□□ -0.16
CASC3-208ENST00000583649 POTEB2H3BUK9 544 aa14.04□□□□□ -0.16
CASC3-208ENST00000583649 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.16
CASC3-208ENST00000583649 MOGSQ13724 837 aa14.04□□□□□ -0.16
CASC3-208ENST00000583649 TWISTNBQ3B726 338 aaPredicted RBP14.04□□□□□ -0.16
CASC3-208ENST00000583649 APOBEC3HQ6NTF7 200 aaKnown RBP14.04□□□□□ -0.16
CASC3-208ENST00000583649 SCYL3Q8IZE3 742 aa14.04□□□□□ -0.16
CASC3-208ENST00000583649 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
CASC3-208ENST00000583649 UNC80Q8N2C7 3258 aa14.03□□□□□ -0.16
CASC3-208ENST00000583649 GCLCP48506 637 aaPredicted RBP14.03□□□□□ -0.16
CASC3-208ENST00000583649 TCP10Q12799 353 aa14.03□□□□□ -0.16
CASC3-208ENST00000583649 FAM110CQ1W6H9 321 aa14.03□□□□□ -0.16
CASC3-208ENST00000583649 TRMT44Q8IYL2 757 aaKnown RBP14.03□□□□□ -0.16
CASC3-208ENST00000583649 ANKRD13CQ8N6S4 541 aa14.03□□□□□ -0.16
CASC3-208ENST00000583649 ZNF594Q96JF6 807 aaPredicted RBP14.03□□□□□ -0.16
CASC3-208ENST00000583649 C9orf78Q9NZ63 289 aaPredicted RBP14.03□□□□□ -0.16
CASC3-208ENST00000583649 LRRFIP2Q9Y608 721 aaKnown RBP14.03□□□□□ -0.16
CASC3-208ENST00000583649 APAF1O14727 1248 aa14.02□□□□□ -0.17
CASC3-208ENST00000583649 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.17
CASC3-208ENST00000583649 TSPYL6Q8N831 410 aa14.02□□□□□ -0.17
CASC3-208ENST00000583649 MAFAQ8NHW3 353 aaPredicted RBP14.02□□□□□ -0.17
CASC3-208ENST00000583649 WDR66Q8TBY9 1149 aa14.02□□□□□ -0.17
CASC3-208ENST00000583649 FAM161BQ96MY7 647 aa14.02□□□□□ -0.17
CASC3-208ENST00000583649 GUCD1Q96NT3 240 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms