RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
MKS1-212ENST00000583577 SRCIN1Q9C0H9 1055 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 SRRDQ9UH36 339 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 DNAH12Q6ZR08 3092 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 XDHP47989 1333 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 DOCK3Q8IZD9 2030 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 CDH23Q9H251 3354 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
MKS1-212ENST00000583577 TLR2O60603 784 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 ALDH1L1O75891 902 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 TFRCP02786 760 aaKnown RBP12.07□□□□□ -0.48
MKS1-212ENST00000583577 PSMC4P43686 418 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 GCKRQ14397 625 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 BEND3Q5T5X7 828 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 TDHQ8IZJ6 230 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 GUCD1Q96NT3 240 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 UNC93B1Q9H1C4 597 aa12.07□□□□□ -0.48
MKS1-212ENST00000583577 FMNL1O95466 1100 aaPredicted RBP12.06□□□□□ -0.48
MKS1-212ENST00000583577 SGPL1O95470 568 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 RLBP1P12271 317 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 SYN1P17600 705 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 OSBPP22059 807 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 ATP2B4P23634 1241 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 HOXD10P28358 340 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 CTGFP29279 349 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 GTF2A2P52657 109 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 STRIP1Q5VSL9 837 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
MKS1-212ENST00000583577 ANTXR1Q9H6X2 564 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 VEZTQ9HBM0 779 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
MKS1-212ENST00000583577 PPP2R3BQ9Y5P8 575 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 MYO9BQ13459 2157 aa12.06□□□□□ -0.48
MKS1-212ENST00000583577 CLRN2A0PK11 232 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 PDE8AO60658 829 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 MAGEA10P43363 369 aaPredicted RBP12.05□□□□□ -0.48
MKS1-212ENST00000583577 TTLL5Q6EMB2 1281 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 JARID2Q92833 1246 aaPredicted RBP12.05□□□□□ -0.48
MKS1-212ENST00000583577 SNX21Q969T3 373 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 PAWRQ96IZ0 340 aaKnown RBP12.05□□□□□ -0.48
MKS1-212ENST00000583577 CCDC85AQ96PX6 553 aaPredicted RBP12.05□□□□□ -0.48
MKS1-212ENST00000583577 UBE2OQ9C0C9 1292 aaKnown RBP12.05□□□□□ -0.48
MKS1-212ENST00000583577 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 C9orf78Q9NZ63 289 aaPredicted RBP12.05□□□□□ -0.48
MKS1-212ENST00000583577 CHMP5Q9NZZ3 219 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 MYPNQ86TC9 1320 aa12.05□□□□□ -0.48
MKS1-212ENST00000583577 H7C1W4 665 aa12.04□□□□□ -0.48
MKS1-212ENST00000583577 FRAT2O75474 233 aaPredicted RBP12.04□□□□□ -0.48
MKS1-212ENST00000583577 TRIM27P14373 513 aa12.04□□□□□ -0.48
MKS1-212ENST00000583577 RBM25P49756 843 aaKnown RBP12.04□□□□□ -0.48
MKS1-212ENST00000583577 MMP14P50281 582 aa12.04□□□□□ -0.48
MKS1-212ENST00000583577 CCT4P50991 539 aaKnown RBP12.04□□□□□ -0.48
MKS1-212ENST00000583577 SKAP1Q86WV1 359 aa12.04□□□□□ -0.48
MKS1-212ENST00000583577 IL27Q8NEV9 243 aa12.04□□□□□ -0.48
MKS1-212ENST00000583577 CPA4Q9UI42 421 aa12.04□□□□□ -0.48
MKS1-212ENST00000583577 GRM8O00222 908 aa12.03□□□□□ -0.48
MKS1-212ENST00000583577 DEFB118Q96PH6 123 aa12.03□□□□□ -0.48
MKS1-212ENST00000583577 C22orf23Q9BZE7 217 aa12.03□□□□□ -0.48
MKS1-212ENST00000583577 ZNF804BA4D1E1 1349 aa12.03□□□□□ -0.48
MKS1-212ENST00000583577 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
MKS1-212ENST00000583577 TMEM265A0A087WTH1 108 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 DDX11L8A8MPP1 907 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 BTBD19C9JJ37 291 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 MYO1BO43795 1136 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 GTF2IP78347 998 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 NUCB1Q02818 461 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 RASA3Q14644 834 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 BMP2KLQ5H9B9 411 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.02□□□□□ -0.49
MKS1-212ENST00000583577 ANKRD18AQ8IVF6 992 aa12.02□□□□□ -0.49
MKS1-212ENST00000583577 MAFAQ8NHW3 353 aaPredicted RBP12.02□□□□□ -0.49
MKS1-212ENST00000583577 DIS3LQ8TF46 1054 aaKnown RBP12.02□□□□□ -0.49
MKS1-212ENST00000583577 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
MKS1-212ENST00000583577 F8W031 263 aaPredicted RBP12.01□□□□□ -0.49
MKS1-212ENST00000583577 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 CETPP11597 493 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 CASP7P55210 303 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 CTSWP56202 376 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 PRKCZQ05513 592 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 VGLL4Q14135 290 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 NECAB2Q7Z6G3 386 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 ITPRIPQ8IWB1 547 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 HSCBQ8IWL3 235 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 HELBQ8NG08 1087 aaPredicted RBP12.01□□□□□ -0.49
MKS1-212ENST00000583577 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 TBC1D2Q9BYX2 928 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 COA1Q9GZY4 146 aa12.01□□□□□ -0.49
MKS1-212ENST00000583577 TNFRSF10AO00220 468 aa12□□□□□ -0.49
MKS1-212ENST00000583577 MAP3K9P80192 1104 aa12□□□□□ -0.49
MKS1-212ENST00000583577 CFAP100Q494V2 611 aa12□□□□□ -0.49
MKS1-212ENST00000583577 FAM109BQ6ICB4 259 aaPredicted RBP12□□□□□ -0.49
MKS1-212ENST00000583577 C17orf99Q6UX52 265 aa12□□□□□ -0.49
MKS1-212ENST00000583577 TXNRD3Q86VQ6 643 aa12□□□□□ -0.49
MKS1-212ENST00000583577 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms