RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 PDE4DIPQ5VU43 2346 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 MAGEB6P1A0A0J9YX57 407 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 SLC19A1P41440 591 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 AGERQ15109 404 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 HDGFL1Q5TGJ6 251 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 CC2D2BQ6DHV5 1058 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 USP50Q70EL3 339 aaPredicted RBP10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 NIM1KQ8IY84 436 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 XAGE3Q8WTP9 111 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 AIDAQ96BJ3 306 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 TSPYL4Q9UJ04 414 aa10.38□□□□□ -0.75
PPP4R1-225ENST00000583438 CELF2O95319 508 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 CD2BP2O95400 341 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 KIAA2012Q0VF49 1180 aa10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 COPS6Q7L5N1 327 aa10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 CELF1Q92879 486 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 UTP14AQ9BVJ6 771 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 ADARB2Q9NS39 739 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 ZNRF3Q9ULT6 936 aa10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 LAMB1P07942 1786 aa10.37□□□□□ -0.75
PPP4R1-225ENST00000583438 WTIPA6NIX2 430 aaPredicted RBP10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 FAM155AB1AL88 458 aaPredicted RBP10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 LMOD1P29536 600 aaPredicted RBP10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 TMPOP42166 694 aaKnown RBP10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 WNT7BP56706 349 aa10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 AIMP1Q12904 312 aaKnown RBP10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 ZBTB33Q86T24 672 aa10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 SP8Q8IXZ3 490 aa10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 CALR3Q96L12 384 aaKnown RBP10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
PPP4R1-225ENST00000583438 ADM5C9JUS6 153 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 MAP2K1Q02750 393 aaPredicted RBP10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 GRAPQ13588 217 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 PARP10Q53GL7 1025 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 CIAPIN1Q6FI81 312 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 PPP1R42Q7Z4L9 355 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 CCDC146Q8IYE0 955 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 GRAPLQ8TC17 118 aaPredicted RBP10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 NLRP3Q96P20 1036 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 MCOLN1Q9GZU1 580 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 DBNDD1Q9H9R9 158 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 POLLQ9UGP5 575 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 HTTP42858 3142 aa10.35□□□□□ -0.75
PPP4R1-225ENST00000583438 PSMD14O00487 310 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 SOX11P35716 441 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 RGS19P49795 217 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 RIPK4P57078 832 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 GPSM2P81274 684 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 TCIRG1Q13488 830 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 SPRYD7Q5W111 196 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 DPP8Q6V1X1 898 aaPredicted RBP10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 CCDC82Q8N4S0 544 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 MPNDQ8N594 471 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 ISCA1Q9BUE6 129 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 C1QTNF2Q9BXJ5 285 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 ZNF408Q9H9D4 720 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 CNOT7Q9UIV1 285 aaKnown RBP10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 PCDHB9Q9Y5E1 797 aa10.34□□□□□ -0.75
PPP4R1-225ENST00000583438 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 CHL1O00533 1208 aa10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 TBC1D10BQ4KMP7 808 aaPredicted RBP10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 USP48Q86UV5 1035 aa10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 FAM89AQ96GI7 184 aa10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 PRKD2Q9BZL6 878 aa10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 SCAF8Q9UPN6 1271 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 ECM29Q5VYK3 1845 aa10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 SH3TC1Q8TE82 1336 aa10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 CDHR2Q9BYE9 1310 aa10.33□□□□□ -0.76
PPP4R1-225ENST00000583438 PAPPA2Q9BXP8 1791 aa10.32□□□□□ -0.76
PPP4R1-225ENST00000583438 CCDC85CA6NKD9 419 aa10.32□□□□□ -0.76
PPP4R1-225ENST00000583438 JARID2Q92833 1246 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-225ENST00000583438 SEC31BQ9NQW1 1179 aa10.32□□□□□ -0.76
PPP4R1-225ENST00000583438 TRMT112Q9UI30 125 aaKnown RBP10.32□□□□□ -0.76
PPP4R1-225ENST00000583438 OTOFQ9HC10 1997 aa10.32□□□□□ -0.76
PPP4R1-225ENST00000583438 MAPK8IP3Q9UPT6 1336 aa10.32□□□□□ -0.76
PPP4R1-225ENST00000583438 BBOX1O75936 387 aa10.31□□□□□ -0.76
PPP4R1-225ENST00000583438 VARSP26640 1264 aaKnown RBP10.31□□□□□ -0.76
PPP4R1-225ENST00000583438 MAP2K2P36507 400 aa10.31□□□□□ -0.76
PPP4R1-225ENST00000583438 ECE1P42892 770 aa10.31□□□□□ -0.76
PPP4R1-225ENST00000583438 ARID3AQ99856 593 aa10.31□□□□□ -0.76
PPP4R1-225ENST00000583438 VPS33BQ9H267 617 aa10.31□□□□□ -0.76
PPP4R1-225ENST00000583438 ECE2O60344 883 aa10.3□□□□□ -0.76
PPP4R1-225ENST00000583438 SF3B3Q15393 1217 aaKnown RBP10.3□□□□□ -0.76
PPP4R1-225ENST00000583438 EHBP1Q8NDI1 1231 aa10.3□□□□□ -0.76
PPP4R1-225ENST00000583438 HHIPL1Q96JK4 782 aa10.3□□□□□ -0.76
PPP4R1-225ENST00000583438 UCN2Q96RP3 112 aa10.3□□□□□ -0.76
PPP4R1-225ENST00000583438 PHAXQ9H814 394 aaKnown RBP10.3□□□□□ -0.76
PPP4R1-225ENST00000583438 ZNF609O15014 1411 aa10.3□□□□□ -0.76
PPP4R1-225ENST00000583438 BRCA2P51587 3418 aa10.29□□□□□ -0.76
PPP4R1-225ENST00000583438 HUNKP57058 714 aa10.29□□□□□ -0.76
PPP4R1-225ENST00000583438 ZNF697Q5TEC3 545 aa10.29□□□□□ -0.76
PPP4R1-225ENST00000583438 MOB2Q70IA6 237 aa10.29□□□□□ -0.76
PPP4R1-225ENST00000583438 DDX46Q7L014 1031 aaKnown RBP10.29□□□□□ -0.76
PPP4R1-225ENST00000583438 ZNF598Q86UK7 904 aaKnown RBP10.29□□□□□ -0.76
PPP4R1-225ENST00000583438 TRMT44Q8IYL2 757 aaKnown RBP10.29□□□□□ -0.76
PPP4R1-225ENST00000583438 SUPT20HQ8NEM7 779 aa10.29□□□□□ -0.76
PPP4R1-225ENST00000583438 PLBD2Q8NHP8 589 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms