RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 NR2E3Q9Y5X4 410 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 MYPNQ86TC9 1320 aa15.51■□□□□ 0.07
TOP3A-215ENST00000583328 ALDH1L1O75891 902 aa15.51■□□□□ 0.07
TOP3A-215ENST00000583328 INPP5BP32019 993 aa15.51■□□□□ 0.07
TOP3A-215ENST00000583328 APOBEC3HQ6NTF7 200 aaKnown RBP15.51■□□□□ 0.07
TOP3A-215ENST00000583328 SLC4A10Q6U841 1118 aa15.51■□□□□ 0.07
TOP3A-215ENST00000583328 SUCLG2Q96I99 432 aa15.51■□□□□ 0.07
TOP3A-215ENST00000583328 OTOFQ9HC10 1997 aa15.51■□□□□ 0.07
TOP3A-215ENST00000583328 BRCA2P51587 3418 aa15.5■□□□□ 0.07
TOP3A-215ENST00000583328 METTL24Q5JXM2 366 aa15.5■□□□□ 0.07
TOP3A-215ENST00000583328 SLC17A8Q8NDX2 589 aa15.5■□□□□ 0.07
TOP3A-215ENST00000583328 SRCIN1Q9C0H9 1055 aa15.5■□□□□ 0.07
TOP3A-215ENST00000583328 SALL2Q9Y467 1007 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-215ENST00000583328 MAST3O60307 1309 aa15.49■□□□□ 0.07
TOP3A-215ENST00000583328 BCAMP50895 628 aa15.49■□□□□ 0.07
TOP3A-215ENST00000583328 LRRC24Q50LG9 513 aa15.49■□□□□ 0.07
TOP3A-215ENST00000583328 SUGT1Q9Y2Z0 365 aa15.49■□□□□ 0.07
TOP3A-215ENST00000583328 DLL1O00548 723 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 FCGRTP55899 365 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 CCDC184Q52MB2 194 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
TOP3A-215ENST00000583328 HHIPL2Q6UWX4 724 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 UBE2Q1Q7Z7E8 422 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 WDR63Q8IWG1 891 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 FAM151AQ8WW52 585 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 KAZALD1Q96I82 304 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 PARK7Q99497 189 aaKnown RBP15.48■□□□□ 0.07
TOP3A-215ENST00000583328 KCNH4Q9UQ05 1017 aa15.48■□□□□ 0.07
TOP3A-215ENST00000583328 ZBTB7BO15156 539 aaPredicted RBP15.47■□□□□ 0.07
TOP3A-215ENST00000583328 FARP2O94887 1054 aaPredicted RBP15.47■□□□□ 0.07
TOP3A-215ENST00000583328 PDE8BO95263 885 aa15.47■□□□□ 0.07
TOP3A-215ENST00000583328 PRKCZQ05513 592 aa15.47■□□□□ 0.07
TOP3A-215ENST00000583328 SLAIN1Q8ND83 568 aa15.47■□□□□ 0.07
TOP3A-215ENST00000583328 U2AF1L4Q8WU68 220 aaKnown RBP15.47■□□□□ 0.07
TOP3A-215ENST00000583328 PRO3102Q9H379 93 aa15.47■□□□□ 0.07
TOP3A-215ENST00000583328 ZNF112Q9UJU3 913 aa15.47■□□□□ 0.07
TOP3A-215ENST00000583328 ADGRA2Q96PE1 1338 aa15.46■□□□□ 0.07
TOP3A-215ENST00000583328 IFIT1P09914 478 aaKnown RBP15.46■□□□□ 0.07
TOP3A-215ENST00000583328 NBPF7P0C2Y1 421 aaPredicted RBP15.46■□□□□ 0.07
TOP3A-215ENST00000583328 TCP10Q12799 353 aa15.46■□□□□ 0.07
TOP3A-215ENST00000583328 UNC93B1Q9H1C4 597 aa15.46■□□□□ 0.07
TOP3A-215ENST00000583328 BICC1Q9H694 974 aaKnown RBP15.46■□□□□ 0.07
TOP3A-215ENST00000583328 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
TOP3A-215ENST00000583328 A0A1B0GUL6 1792 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 CXCL11O14625 94 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 EVI5O60447 810 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 SGPL1O95470 568 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 TFRCP02786 760 aaKnown RBP15.45■□□□□ 0.06
TOP3A-215ENST00000583328 CYP2C8P10632 490 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 MOGSQ13724 837 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 GABRQQ9UN88 632 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 ARAP2Q8WZ64 1704 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 ZSWIM8A7E2V4 1837 aa15.45■□□□□ 0.06
TOP3A-215ENST00000583328 ADCY3O60266 1144 aa15.44■□□□□ 0.06
TOP3A-215ENST00000583328 BCRP11274 1271 aa15.44■□□□□ 0.06
TOP3A-215ENST00000583328 NOL9Q5SY16 702 aaKnown RBP15.44■□□□□ 0.06
TOP3A-215ENST00000583328 GPAT2Q6NUI2 795 aa15.44■□□□□ 0.06
TOP3A-215ENST00000583328 VGLL2Q8N8G2 317 aa15.44■□□□□ 0.06
TOP3A-215ENST00000583328 WDR66Q8TBY9 1149 aa15.44■□□□□ 0.06
TOP3A-215ENST00000583328 PUM3Q15397 648 aaKnown RBP15.43■□□□□ 0.06
TOP3A-215ENST00000583328 RABL6Q3YEC7 729 aaPredicted RBP15.43■□□□□ 0.06
TOP3A-215ENST00000583328 CDC42EP5Q6NZY7 148 aa15.43■□□□□ 0.06
TOP3A-215ENST00000583328 FASTKD5Q7L8L6 764 aaKnown RBP15.43■□□□□ 0.06
TOP3A-215ENST00000583328 DAGLAQ9Y4D2 1042 aa15.43■□□□□ 0.06
TOP3A-215ENST00000583328 UTYO14607 1347 aa15.43■□□□□ 0.06
TOP3A-215ENST00000583328 A0A1W2PPC1 479 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 ANP32CO43423 234 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 FLT3LGP49771 235 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 NFIAQ12857 509 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 ANKRD44Q8N8A2 993 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 KLHDC4Q8TBB5 520 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 PICK1Q9NRD5 415 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 USP40Q9NVE5 1235 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 STAP2Q9UGK3 403 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 ZHX2Q9Y6X8 837 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
TOP3A-215ENST00000583328 INHAP05111 366 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 SLC5A1P13866 664 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 ELNP15502 786 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 CAPN2P17655 700 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 FGFR2P21802 821 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 DIXDC1Q155Q3 683 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 GADL1Q6ZQY3 521 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 DEFB118Q96PH6 123 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-215ENST00000583328 TAOK2Q9UL54 1235 aa15.41■□□□□ 0.06
TOP3A-215ENST00000583328 SOX1O00570 391 aaPredicted RBP15.4■□□□□ 0.06
TOP3A-215ENST00000583328 TNPO2O14787 897 aaKnown RBP15.4■□□□□ 0.06
TOP3A-215ENST00000583328 ZFPM1Q8IX07 1006 aa15.4■□□□□ 0.06
TOP3A-215ENST00000583328 PXYLP1Q8TE99 480 aa15.4■□□□□ 0.06
TOP3A-215ENST00000583328 LRCH3Q96II8 777 aa15.4■□□□□ 0.06
TOP3A-215ENST00000583328 FAM198AQ9UFP1 575 aa15.4■□□□□ 0.06
TOP3A-215ENST00000583328 CACNA1FO60840 1977 aa15.4■□□□□ 0.06
TOP3A-215ENST00000583328 SZT2Q5T011 3432 aa15.39■□□□□ 0.05
TOP3A-215ENST00000583328 A0A0G2JLL6 359 aaPredicted RBP15.39■□□□□ 0.05
TOP3A-215ENST00000583328 LDHBP07195 334 aaKnown RBP15.39■□□□□ 0.05
TOP3A-215ENST00000583328 PRDX5P30044 214 aa15.39■□□□□ 0.05
TOP3A-215ENST00000583328 IRF5Q13568 498 aa15.39■□□□□ 0.05
TOP3A-215ENST00000583328 PRRT2Q7Z6L0 340 aaPredicted RBP15.39■□□□□ 0.05
TOP3A-215ENST00000583328 SCYL3Q8IZE3 742 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms