RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 ECM2O94769 699 aaPredicted RBP22.08■■□□□ 1.13
SNX11-212ENST00000583320 MTFR1Q15390 333 aa22.08■■□□□ 1.13
SNX11-212ENST00000583320 LAMA3Q16787 3333 aa22.07■■□□□ 1.12
SNX11-212ENST00000583320 ANKRD18BA2A2Z9 1011 aa22.07■■□□□ 1.12
SNX11-212ENST00000583320 TCP10L2B9ZVM9 353 aa22.07■■□□□ 1.12
SNX11-212ENST00000583320 CTGFP29279 349 aa22.07■■□□□ 1.12
SNX11-212ENST00000583320 MAP3K9P80192 1104 aa22.07■■□□□ 1.12
SNX11-212ENST00000583320 LACTBP83111 547 aaPredicted RBP22.07■■□□□ 1.12
SNX11-212ENST00000583320 ARHGEF6Q15052 776 aa22.07■■□□□ 1.12
SNX11-212ENST00000583320 CEP85Q6P2H3 762 aa22.07■■□□□ 1.12
SNX11-212ENST00000583320 C1orf115Q9H7X2 142 aa22.07■■□□□ 1.12
SNX11-212ENST00000583320 C9orf78Q9NZ63 289 aaPredicted RBP22.07■■□□□ 1.12
SNX11-212ENST00000583320 GRM8O00222 908 aa22.06■■□□□ 1.12
SNX11-212ENST00000583320 TLR2O60603 784 aa22.06■■□□□ 1.12
SNX11-212ENST00000583320 TNFAIP1Q13829 316 aa22.06■■□□□ 1.12
SNX11-212ENST00000583320 TTF2Q9UNY4 1162 aaKnown RBP22.06■■□□□ 1.12
SNX11-212ENST00000583320 FAM205AQ6ZU69 1335 aa22.06■■□□□ 1.12
SNX11-212ENST00000583320 HMMRO75330 724 aa22.05■■□□□ 1.12
SNX11-212ENST00000583320 FOXO4P98177 505 aa22.05■■□□□ 1.12
SNX11-212ENST00000583320 SMC5Q8IY18 1101 aa22.05■■□□□ 1.12
SNX11-212ENST00000583320 PRO3102Q9H379 93 aa22.05■■□□□ 1.12
SNX11-212ENST00000583320 SNCAIPQ9Y6H5 919 aa22.05■■□□□ 1.12
SNX11-212ENST00000583320 SPDYE5A6NIY4 337 aa22.04■■□□□ 1.12
SNX11-212ENST00000583320 BTBD19C9JJ37 291 aa22.04■■□□□ 1.12
SNX11-212ENST00000583320 GRIK5Q16478 980 aa22.04■■□□□ 1.12
SNX11-212ENST00000583320 MFSD14BQ5SR56 506 aa22.04■■□□□ 1.12
SNX11-212ENST00000583320 SIRT2Q8IXJ6 389 aa22.04■■□□□ 1.12
SNX11-212ENST00000583320 ZNF594Q96JF6 807 aaPredicted RBP22.04■■□□□ 1.12
SNX11-212ENST00000583320 SERPINA10Q9UK55 444 aa22.04■■□□□ 1.12
SNX11-212ENST00000583320 NBPF7P0C2Y1 421 aaPredicted RBP22.03■■□□□ 1.12
SNX11-212ENST00000583320 ATP8B2P98198 1209 aa22.03■■□□□ 1.12
SNX11-212ENST00000583320 UBE2Q1Q7Z7E8 422 aa22.03■■□□□ 1.12
SNX11-212ENST00000583320 DPF3Q92784 378 aa22.03■■□□□ 1.12
SNX11-212ENST00000583320 CSADQ9Y600 493 aa22.03■■□□□ 1.12
SNX11-212ENST00000583320 LRRFIP2Q9Y608 721 aaKnown RBP22.03■■□□□ 1.12
SNX11-212ENST00000583320 DLL1O00548 723 aa22.02■■□□□ 1.12
SNX11-212ENST00000583320 CACNB3P54284 484 aa22.02■■□□□ 1.12
SNX11-212ENST00000583320 IFIT5Q13325 482 aaKnown RBP22.02■■□□□ 1.12
SNX11-212ENST00000583320 EPHA10Q5JZY3 1008 aa22.02■■□□□ 1.12
SNX11-212ENST00000583320 CHMP3Q9Y3E7 222 aa22.02■■□□□ 1.12
SNX11-212ENST00000583320 IRF6O14896 467 aa22.01■■□□□ 1.11
SNX11-212ENST00000583320 CRKP46108 304 aa22.01■■□□□ 1.11
SNX11-212ENST00000583320 GYG1P46976 350 aa22.01■■□□□ 1.11
SNX11-212ENST00000583320 MTX1Q13505 466 aa22.01■■□□□ 1.11
SNX11-212ENST00000583320 TDRD7Q8NHU6 1098 aaKnown RBP22.01■■□□□ 1.11
SNX11-212ENST00000583320 TRIM47Q96LD4 638 aa22.01■■□□□ 1.11
SNX11-212ENST00000583320 CETPP11597 493 aa22■■□□□ 1.11
SNX11-212ENST00000583320 KIF22Q14807 665 aa22■■□□□ 1.11
SNX11-212ENST00000583320 ZKSCAN4Q969J2 545 aaPredicted RBP22■■□□□ 1.11
SNX11-212ENST00000583320 C17orf99Q6UX52 265 aa21.99■■□□□ 1.11
SNX11-212ENST00000583320 DCTPP1Q9H773 170 aa21.99■■□□□ 1.11
SNX11-212ENST00000583320 ZCCHC17Q9NP64 241 aaKnown RBP21.99■■□□□ 1.11
SNX11-212ENST00000583320 CPA4Q9UI42 421 aa21.99■■□□□ 1.11
SNX11-212ENST00000583320 LMBR1LQ6UX01 489 aa21.98■■□□□ 1.11
SNX11-212ENST00000583320 ERO1BQ86YB8 467 aa21.98■■□□□ 1.11
SNX11-212ENST00000583320 SLC17A8Q8NDX2 589 aa21.98■■□□□ 1.11
SNX11-212ENST00000583320 WRNIP1Q96S55 665 aa21.98■■□□□ 1.11
SNX11-212ENST00000583320 SRRDQ9UH36 339 aa21.98■■□□□ 1.11
SNX11-212ENST00000583320 ADGRA2Q96PE1 1338 aa21.98■■□□□ 1.11
SNX11-212ENST00000583320 SOX1O00570 391 aaPredicted RBP21.97■■□□□ 1.11
SNX11-212ENST00000583320 GNRH1P01148 92 aa21.97■■□□□ 1.11
SNX11-212ENST00000583320 OSBPP22059 807 aa21.97■■□□□ 1.11
SNX11-212ENST00000583320 PSMC4P43686 418 aa21.97■■□□□ 1.11
SNX11-212ENST00000583320 PRMT2P55345 433 aa21.97■■□□□ 1.11
SNX11-212ENST00000583320 SNAPC2Q13487 334 aa21.97■■□□□ 1.11
SNX11-212ENST00000583320 SSH3Q8TE77 659 aa21.97■■□□□ 1.11
SNX11-212ENST00000583320 FAM84BQ96KN1 310 aaPredicted RBP21.97■■□□□ 1.11
SNX11-212ENST00000583320 CCL5P13501 91 aa21.96■■□□□ 1.11
SNX11-212ENST00000583320 GJA8P48165 433 aa21.96■■□□□ 1.11
SNX11-212ENST00000583320 TNNI2P48788 182 aa21.96■■□□□ 1.11
SNX11-212ENST00000583320 PPIL2Q13356 520 aa21.96■■□□□ 1.11
SNX11-212ENST00000583320 POLA2Q14181 598 aa21.96■■□□□ 1.11
SNX11-212ENST00000583320 LDHAL6AQ6ZMR3 332 aa21.96■■□□□ 1.11
SNX11-212ENST00000583320 SUCLG2Q96I99 432 aa21.96■■□□□ 1.11
SNX11-212ENST00000583320 CNNM1Q9NRU3 951 aa21.96■■□□□ 1.11
SNX11-212ENST00000583320 WDHD1O75717 1129 aaPredicted RBP21.95■■□□□ 1.1
SNX11-212ENST00000583320 HIBADHP31937 336 aaKnown RBP21.95■■□□□ 1.1
SNX11-212ENST00000583320 GRK4P32298 578 aa21.95■■□□□ 1.1
SNX11-212ENST00000583320 IQSEC3Q9UPP2 1182 aaPredicted RBP21.95■■□□□ 1.1
SNX11-212ENST00000583320 RIPOR2Q9Y4F9 1068 aa21.95■■□□□ 1.1
SNX11-212ENST00000583320 GJB1P08034 283 aa21.94■■□□□ 1.1
SNX11-212ENST00000583320 KAZALD1Q96I82 304 aa21.94■■□□□ 1.1
SNX11-212ENST00000583320 PUS3Q9BZE2 481 aaKnown RBP21.94■■□□□ 1.1
SNX11-212ENST00000583320 NUCB1Q02818 461 aa21.93■■□□□ 1.1
SNX11-212ENST00000583320 RABL6Q3YEC7 729 aaPredicted RBP21.93■■□□□ 1.1
SNX11-212ENST00000583320 MYPNQ86TC9 1320 aa21.93■■□□□ 1.1
SNX11-212ENST00000583320 RAET1EQ8TD07 263 aa21.93■■□□□ 1.1
SNX11-212ENST00000583320 LRCH3Q96II8 777 aa21.93■■□□□ 1.1
SNX11-212ENST00000583320 PNMA6EA0A0J9YXQ4 647 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 INPP5BP32019 993 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 MOGSQ13724 837 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 UBE4AQ14139 1066 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 CCDC57Q2TAC2 916 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 TAF7LQ5H9L4 462 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 NKX2-3Q8TAU0 364 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 HTATIP2Q9BUP3 242 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 RNF208Q9H0X6 261 aa21.92■■□□□ 1.1
SNX11-212ENST00000583320 PDHXO00330 501 aa21.91■■□□□ 1.1
SNX11-212ENST00000583320 FARP2O94887 1054 aaPredicted RBP21.91■■□□□ 1.1
SNX11-212ENST00000583320 FMNL1O95466 1100 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms