RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 HAUS3Q68CZ6 603 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 XAGE2Q96GT9 111 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 SPDYE4A6NLX3 237 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 B4E1Z4 1266 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 ZNF569Q5MCW4 686 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 FBF1Q8TES7 1133 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 MTUS1Q9ULD2 1270 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 KCNH3Q9ULD8 1083 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 GPAA1O43292 621 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 CNNM4Q6P4Q7 775 aa18.43■□□□□ 0.54
ERBB2-214ENST00000583038 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
ERBB2-214ENST00000583038 CCDC129Q6ZRS4 1044 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 CNBD1Q8NA66 436 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 CLSTN2Q9H4D0 955 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 VEZTQ9HBM0 779 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
ERBB2-214ENST00000583038 DHX37Q8IY37 1157 aaKnown RBP18.42■□□□□ 0.54
ERBB2-214ENST00000583038 TFCP2L1Q9NZI6 479 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 PLEKHG3A1L390 1219 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 ARID5AQ03989 594 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 GCKRQ14397 625 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 JAKMIP2Q96AA8 810 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 TIGD1Q96MW7 591 aa18.42■□□□□ 0.54
ERBB2-214ENST00000583038 ARHGEF10O15013 1369 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 LZTS2Q9BRK4 669 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 ATP6V0A2Q9Y487 856 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 MYCNP04198 464 aaPredicted RBP18.41■□□□□ 0.54
ERBB2-214ENST00000583038 RXRAP19793 462 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 TBC1D8BQ0IIM8 1120 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 LETM2Q2VYF4 491 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 DIS3L2Q8IYB7 885 aaKnown RBP18.41■□□□□ 0.54
ERBB2-214ENST00000583038 LZTFL1Q9NQ48 299 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 ANKS4BQ8N8V4 417 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 ATRIPQ8WXE1 791 aa18.41■□□□□ 0.54
ERBB2-214ENST00000583038 NAP1L3Q99457 506 aaPredicted RBP18.41■□□□□ 0.54
ERBB2-214ENST00000583038 TTF2Q9UNY4 1162 aaKnown RBP18.41■□□□□ 0.54
ERBB2-214ENST00000583038 TRAF5O00463 557 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 PAXIP1Q6ZW49 1069 aaPredicted RBP18.4■□□□□ 0.54
ERBB2-214ENST00000583038 FRMD4BQ9Y2L6 1034 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 KAT6BQ8WYB5 2073 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 DKC1O60832 514 aaKnown RBP eCLIP18.4■□□□□ 0.54
ERBB2-214ENST00000583038 CCDC122Q5T0U0 273 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 SYT10Q6XYQ8 523 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 SSX2IPQ9Y2D8 614 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 PTPRTO14522 1441 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 USP19O94966 1318 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 ZNF445P59923 1031 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 ZNF174Q15697 407 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
ERBB2-214ENST00000583038 EPB41P11171 864 aaKnown RBP18.4■□□□□ 0.54
ERBB2-214ENST00000583038 APBB1IPQ7Z5R6 666 aaPredicted RBP18.4■□□□□ 0.54
ERBB2-214ENST00000583038 KIAA1524Q8TCG1 905 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 NUP58Q9BVL2 599 aa18.4■□□□□ 0.54
ERBB2-214ENST00000583038 GNPATO15228 680 aa18.39■□□□□ 0.54
ERBB2-214ENST00000583038 EEF2P13639 858 aaKnown RBP18.39■□□□□ 0.54
ERBB2-214ENST00000583038 OTUD7AQ8TE49 926 aaPredicted RBP18.39■□□□□ 0.54
ERBB2-214ENST00000583038 BTG4Q9NY30 223 aa18.39■□□□□ 0.54
ERBB2-214ENST00000583038 MROH5Q6ZUA9 1318 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 PLCB3Q01970 1234 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 KARSQ15046 597 aaKnown RBP18.39■□□□□ 0.53
ERBB2-214ENST00000583038 ERO1AQ96HE7 468 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 IMPACTQ9P2X3 320 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 RNF123Q5XPI4 1314 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 CPA1P15085 419 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 CALCOCO2Q13137 446 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 KRT25Q7Z3Z0 450 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 NOC4LQ9BVI4 516 aaKnown RBP18.39■□□□□ 0.53
ERBB2-214ENST00000583038 NCKAP5LQ9HCH0 1330 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 SSH2Q76I76 1423 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 ATP2A2P16615 1042 aaKnown RBP18.39■□□□□ 0.53
ERBB2-214ENST00000583038 ATP5JP18859 108 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 GSTA5Q7RTV2 222 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 ATP10AO60312 1499 aa18.39■□□□□ 0.53
ERBB2-214ENST00000583038 BLMP54132 1417 aaPredicted RBP18.38■□□□□ 0.53
ERBB2-214ENST00000583038 IGSF22Q8N9C0 903 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 CEP63Q96MT8 703 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 POLD1P28340 1107 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 PDE4DQ08499 809 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 ZKSCAN3Q9BRR0 538 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 CEP128Q6ZU80 1094 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 SUCLG2Q96I99 432 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 ATP7AQ04656 1500 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 CETN3O15182 167 aa18.38■□□□□ 0.53
ERBB2-214ENST00000583038 EBAG9O00559 213 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 RGS22Q8NE09 1264 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 LEO1Q8WVC0 666 aaPredicted RBP18.37■□□□□ 0.53
ERBB2-214ENST00000583038 CSRNP2Q9H175 543 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 V9GY48 417 aaPredicted RBP18.37■□□□□ 0.53
ERBB2-214ENST00000583038 TTC38Q5R3I4 469 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 CCDC26Q8TAB7 109 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 ARMT1Q9H993 441 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 ARHGEF10LQ9HCE6 1279 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 BACH1O14867 736 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 UFL1O94874 794 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 CAPN2P17655 700 aa18.37■□□□□ 0.53
ERBB2-214ENST00000583038 CCT6AP40227 531 aaKnown RBP18.37■□□□□ 0.53
ERBB2-214ENST00000583038 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms