RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 IFNL3Q8IZI9 196 aa26.62■■□□□ 1.85
CCDC47-204ENST00000582252 ZSCAN16Q9H4T2 348 aaPredicted RBP26.62■■□□□ 1.85
CCDC47-204ENST00000582252 TMEM63CQ9P1W3 806 aa26.62■■□□□ 1.85
CCDC47-204ENST00000582252 FIBPO43427 364 aa26.61■■□□□ 1.85
CCDC47-204ENST00000582252 STYK1Q6J9G0 422 aa26.61■■□□□ 1.85
CCDC47-204ENST00000582252 ILDR2Q71H61 639 aa26.61■■□□□ 1.85
CCDC47-204ENST00000582252 RBM27Q9P2N5 1060 aaKnown RBP26.61■■□□□ 1.85
CCDC47-204ENST00000582252 PTPDC1A2A3K4 754 aa26.6■■□□□ 1.85
CCDC47-204ENST00000582252 CNNM2Q9H8M5 875 aa26.6■■□□□ 1.85
CCDC47-204ENST00000582252 ARMT1Q9H993 441 aa26.6■■□□□ 1.85
CCDC47-204ENST00000582252 XDHP47989 1333 aa26.6■■□□□ 1.85
CCDC47-204ENST00000582252 PPEF1O14829 653 aaPredicted RBP26.59■■□□□ 1.85
CCDC47-204ENST00000582252 ZBTB22O15209 634 aa26.59■■□□□ 1.85
CCDC47-204ENST00000582252 NAA16Q6N069 864 aaPredicted RBP26.59■■□□□ 1.85
CCDC47-204ENST00000582252 TMED8Q6PL24 325 aaPredicted RBP26.59■■□□□ 1.85
CCDC47-204ENST00000582252 FBXO33Q7Z6M2 555 aa26.59■■□□□ 1.85
CCDC47-204ENST00000582252 FAM84BQ96KN1 310 aaPredicted RBP26.59■■□□□ 1.85
CCDC47-204ENST00000582252 BRPF3Q9ULD4 1205 aa26.59■■□□□ 1.85
CCDC47-204ENST00000582252 GADD45BO75293 160 aaPredicted RBP26.59■■□□□ 1.85
CCDC47-204ENST00000582252 CYP7A1P22680 504 aa26.59■■□□□ 1.85
CCDC47-204ENST00000582252 CCT2P78371 535 aaKnown RBP26.59■■□□□ 1.85
CCDC47-204ENST00000582252 TMEM87BQ96K49 555 aa26.59■■□□□ 1.85
CCDC47-204ENST00000582252 SCAND2PQ9GZW5 306 aaPredicted RBP26.59■■□□□ 1.85
CCDC47-204ENST00000582252 RAI14Q9P0K7 980 aa26.59■■□□□ 1.85
CCDC47-204ENST00000582252 ANKIB1Q9P2G1 1089 aa26.59■■□□□ 1.85
CCDC47-204ENST00000582252 ABCF2Q9UG63 623 aa26.59■■□□□ 1.85
CCDC47-204ENST00000582252 NSFL1CQ9UNZ2 370 aaKnown RBP26.59■■□□□ 1.85
CCDC47-204ENST00000582252 LRSAM1Q6UWE0 723 aa26.58■■□□□ 1.85
CCDC47-204ENST00000582252 TBC1D10CQ8IV04 446 aa26.58■■□□□ 1.85
CCDC47-204ENST00000582252 KLHL34Q8N239 644 aa26.58■■□□□ 1.85
CCDC47-204ENST00000582252 DDX11Q96FC9 970 aa26.58■■□□□ 1.85
CCDC47-204ENST00000582252 ATF5Q9Y2D1 282 aaPredicted RBP26.58■■□□□ 1.85
CCDC47-204ENST00000582252 SLC4A4Q9Y6R1 1079 aa26.58■■□□□ 1.85
CCDC47-204ENST00000582252 ELP1O95163 1332 aa26.58■■□□□ 1.85
CCDC47-204ENST00000582252 LTBP1Q14766 1721 aa26.57■■□□□ 1.84
CCDC47-204ENST00000582252 KLF18A0A0U1RQI7 1052 aa26.57■■□□□ 1.84
CCDC47-204ENST00000582252 PSDA5PKW4 1024 aaPredicted RBP26.57■■□□□ 1.84
CCDC47-204ENST00000582252 TDO2P48775 406 aa26.57■■□□□ 1.84
CCDC47-204ENST00000582252 ANTXR2P58335 489 aa26.57■■□□□ 1.84
CCDC47-204ENST00000582252 ZNF622Q969S3 477 aaKnown RBP eCLIP26.57■■□□□ 1.842e-12■■■■□ 25.4
CCDC47-204ENST00000582252 NBPF3Q9H094 633 aa26.57■■□□□ 1.84
CCDC47-204ENST00000582252 ANGEL1Q9UNK9 670 aaKnown RBP26.57■■□□□ 1.84
CCDC47-204ENST00000582252 LEMD3Q9Y2U8 911 aa26.57■■□□□ 1.84
CCDC47-204ENST00000582252 SALL1Q9NSC2 1324 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 DTNBO60941 627 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 LETM1O95202 739 aaPredicted RBP26.56■■□□□ 1.84
CCDC47-204ENST00000582252 FERMT3Q86UX7 667 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 SP8Q8IXZ3 490 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 LCORLQ8N3X6 602 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 KRT23Q9C075 422 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 EPB41L4AQ9HCS5 686 aaPredicted RBP26.56■■□□□ 1.84
CCDC47-204ENST00000582252 IQSEC3Q9UPP2 1182 aaPredicted RBP26.56■■□□□ 1.84
CCDC47-204ENST00000582252 SLX4Q8IY92 1834 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 GOLGA8BA8MQT2 603 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 GSG1L2A8MUP6 293 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 CTDNEP1O95476 244 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 HIBADHP31937 336 aaKnown RBP26.56■■□□□ 1.84
CCDC47-204ENST00000582252 ANP32BQ92688 251 aaKnown RBP26.56■■□□□ 1.84
CCDC47-204ENST00000582252 ATP6V0A2Q9Y487 856 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 MAST2Q6P0Q8 1798 aa26.56■■□□□ 1.84
CCDC47-204ENST00000582252 COL1A1P02452 1464 aaPredicted RBP26.55■■□□□ 1.84
CCDC47-204ENST00000582252 MAGEB6P1A0A0J9YX57 407 aa26.55■■□□□ 1.84
CCDC47-204ENST00000582252 IGSF3O75054 1194 aa26.55■■□□□ 1.84
CCDC47-204ENST00000582252 CCDC183Q5T5S1 534 aa26.55■■□□□ 1.84
CCDC47-204ENST00000582252 CNKSR1Q969H4 720 aa26.55■■□□□ 1.84
CCDC47-204ENST00000582252 MYH15Q9Y2K3 1946 aa26.55■■□□□ 1.84
CCDC47-204ENST00000582252 TMX4Q9H1E5 349 aaPredicted RBP26.54■■□□□ 1.84
CCDC47-204ENST00000582252 RNF41Q9H4P4 317 aaPredicted RBP26.54■■□□□ 1.84
CCDC47-204ENST00000582252 CHRNA5P30532 468 aa26.53■■□□□ 1.84
CCDC47-204ENST00000582252 RESTQ13127 1097 aa26.53■■□□□ 1.84
CCDC47-204ENST00000582252 AKNAD1Q5T1N1 836 aa26.53■■□□□ 1.84
CCDC47-204ENST00000582252 NCOA5Q9HCD5 579 aaKnown RBP26.53■■□□□ 1.84
CCDC47-204ENST00000582252 PODXL2Q9NZ53 605 aa26.53■■□□□ 1.84
CCDC47-204ENST00000582252 CCDC88AQ3V6T2 1871 aa26.53■■□□□ 1.84
CCDC47-204ENST00000582252 SYCE3A1L190 88 aa26.53■■□□□ 1.84
CCDC47-204ENST00000582252 SH2B2O14492 632 aaPredicted RBP26.53■■□□□ 1.84
CCDC47-204ENST00000582252 CPLX1O14810 134 aa26.53■■□□□ 1.84
CCDC47-204ENST00000582252 MFSD6Q6ZSS7 791 aa26.53■■□□□ 1.84
CCDC47-204ENST00000582252 B4E1Z4 1266 aa26.52■■□□□ 1.84
CCDC47-204ENST00000582252 ATP2B4P23634 1241 aa26.52■■□□□ 1.84
CCDC47-204ENST00000582252 NASPP49321 788 aaPredicted RBP26.52■■□□□ 1.84
CCDC47-204ENST00000582252 GPSM2P81274 684 aa26.52■■□□□ 1.84
CCDC47-204ENST00000582252 MIGA1Q8NAN2 632 aa26.52■■□□□ 1.84
CCDC47-204ENST00000582252 RGS22Q8NE09 1264 aa26.52■■□□□ 1.84
CCDC47-204ENST00000582252 STAG1Q8WVM7 1258 aa26.52■■□□□ 1.84
CCDC47-204ENST00000582252 MTA3Q9BTC8 594 aa26.52■■□□□ 1.84
CCDC47-204ENST00000582252 CFAP45Q9UL16 551 aa26.52■■□□□ 1.84
CCDC47-204ENST00000582252 CDKL5O76039 1030 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 CPLX2Q6PUV4 134 aaKnown RBP26.51■■□□□ 1.83
CCDC47-204ENST00000582252 PANK2Q9BZ23 570 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 KIAA1551Q9HCM1 1747 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 GGA1Q9UJY5 639 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 NEDD4P46934 1319 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 ATL3Q6DD88 541 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 CYB5R4Q7L1T6 521 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 SPATA32Q96LK8 384 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 SGIP1Q9BQI5 828 aa26.51■■□□□ 1.83
CCDC47-204ENST00000582252 GPHNQ9NQX3 736 aaPredicted RBP26.51■■□□□ 1.83
CCDC47-204ENST00000582252 WTIPA6NIX2 430 aaPredicted RBP26.5■■□□□ 1.83
CCDC47-204ENST00000582252 SART3Q15020 963 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms