RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 FOCADQ5VW36 1801 aa13.83□□□□□ -0.2
GGA3-211ENST00000582232 M0R2C6 588 aa13.83□□□□□ -0.2
GGA3-211ENST00000582232 GPAA1O43292 621 aa13.83□□□□□ -0.2
GGA3-211ENST00000582232 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
GGA3-211ENST00000582232 LMOD1P29536 600 aaPredicted RBP13.83□□□□□ -0.2
GGA3-211ENST00000582232 BTDP43251 543 aa13.83□□□□□ -0.2
GGA3-211ENST00000582232 RHBDL3P58872 404 aa13.83□□□□□ -0.2
GGA3-211ENST00000582232 DLGAP5Q15398 846 aa13.83□□□□□ -0.2
GGA3-211ENST00000582232 AIDAQ96BJ3 306 aa13.83□□□□□ -0.2
GGA3-211ENST00000582232 PRMT6Q96LA8 375 aaPredicted RBP13.83□□□□□ -0.2
GGA3-211ENST00000582232 STRBPQ96SI9 672 aaKnown RBP13.83□□□□□ -0.2
GGA3-211ENST00000582232 NOL10Q9BSC4 688 aaKnown RBP13.83□□□□□ -0.2
GGA3-211ENST00000582232 AATFQ9NY61 560 aaKnown RBP eCLIP13.83□□□□□ -0.2
GGA3-211ENST00000582232 CCDC171Q6TFL3 1326 aa13.83□□□□□ -0.2
GGA3-211ENST00000582232 RPAP1Q9BWH6 1393 aaPredicted RBP13.83□□□□□ -0.2
GGA3-211ENST00000582232 SHTN1A0MZ66 631 aa13.82□□□□□ -0.2
GGA3-211ENST00000582232 MBD4O95243 580 aa13.82□□□□□ -0.2
GGA3-211ENST00000582232 GNAT2P19087 354 aa13.82□□□□□ -0.2
GGA3-211ENST00000582232 EPS15P42566 896 aa13.82□□□□□ -0.2
GGA3-211ENST00000582232 DYNLL1P63167 89 aaKnown RBP13.82□□□□□ -0.2
GGA3-211ENST00000582232 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
GGA3-211ENST00000582232 MIGA1Q8NAN2 632 aa13.82□□□□□ -0.2
GGA3-211ENST00000582232 IL25Q9H293 177 aa13.82□□□□□ -0.2
GGA3-211ENST00000582232 ADARB2Q9NS39 739 aaKnown RBP13.82□□□□□ -0.2
GGA3-211ENST00000582232 HACL1Q9UJ83 578 aa13.82□□□□□ -0.2
GGA3-211ENST00000582232 IQCA1LA6NCM1 817 aa13.81□□□□□ -0.2
GGA3-211ENST00000582232 POTECB2RU33 542 aa13.81□□□□□ -0.2
GGA3-211ENST00000582232 WNT10BO00744 389 aa13.81□□□□□ -0.2
GGA3-211ENST00000582232 EPB41L2O43491 1005 aaKnown RBP13.81□□□□□ -0.2
GGA3-211ENST00000582232 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
GGA3-211ENST00000582232 RBM5P52756 815 aaKnown RBP eCLIP13.81□□□□□ -0.2
GGA3-211ENST00000582232 FKBP1CQ5VVH2 108 aa13.81□□□□□ -0.2
GGA3-211ENST00000582232 CDC42EP5Q6NZY7 148 aa13.81□□□□□ -0.2
GGA3-211ENST00000582232 LCORLQ8N3X6 602 aa13.81□□□□□ -0.2
GGA3-211ENST00000582232 CRNKL1Q9BZJ0 848 aaKnown RBP13.81□□□□□ -0.2
GGA3-211ENST00000582232 ARMT1Q9H993 441 aa13.81□□□□□ -0.2
GGA3-211ENST00000582232 PCDHAC2Q9Y5I4 1007 aa13.81□□□□□ -0.2
GGA3-211ENST00000582232 KIF4BQ2VIQ3 1234 aa13.8□□□□□ -0.2
GGA3-211ENST00000582232 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
GGA3-211ENST00000582232 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
GGA3-211ENST00000582232 CCDC129Q6ZRS4 1044 aa13.8□□□□□ -0.2
GGA3-211ENST00000582232 USP50Q70EL3 339 aaPredicted RBP13.8□□□□□ -0.2
GGA3-211ENST00000582232 SAMD7Q7Z3H4 446 aa13.8□□□□□ -0.2
GGA3-211ENST00000582232 SH3RF3Q8TEJ3 882 aaPredicted RBP13.8□□□□□ -0.2
GGA3-211ENST00000582232 IDI2Q9BXS1 227 aa13.8□□□□□ -0.2
GGA3-211ENST00000582232 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
GGA3-211ENST00000582232 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 PATL2C9JE40 543 aaKnown RBP13.79□□□□□ -0.2
GGA3-211ENST00000582232 MYO1BO43795 1136 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 WDHD1O75717 1129 aaPredicted RBP13.79□□□□□ -0.2
GGA3-211ENST00000582232 REC8O95072 547 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 EGFRP00533 1210 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
GGA3-211ENST00000582232 ALX1Q15699 326 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 NBPF9Q3BBW0 867 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
GGA3-211ENST00000582232 TEX11Q8IYF3 940 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 TRPM4Q8TD43 1214 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 DSCC1Q9BVC3 393 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 TAF1DQ9H5J8 278 aaPredicted RBP13.79□□□□□ -0.2
GGA3-211ENST00000582232 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
GGA3-211ENST00000582232 ATP8A2Q9NTI2 1148 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 ZNF70Q9UC06 446 aaPredicted RBP13.79□□□□□ -0.2
GGA3-211ENST00000582232 MKRN1Q9UHC7 482 aaKnown RBP13.79□□□□□ -0.2
GGA3-211ENST00000582232 ZMYM6O95789 1325 aa13.79□□□□□ -0.2
GGA3-211ENST00000582232 FOXP2O15409 715 aa13.78□□□□□ -0.2
GGA3-211ENST00000582232 EPHX2P34913 555 aa13.78□□□□□ -0.2
GGA3-211ENST00000582232 HIRAP54198 1017 aaPredicted RBP13.78□□□□□ -0.2
GGA3-211ENST00000582232 KIAA1211Q6ZU35 1233 aa13.78□□□□□ -0.2
GGA3-211ENST00000582232 PNMA8AQ86V59 439 aaPredicted RBP13.78□□□□□ -0.2
GGA3-211ENST00000582232 ZC3H15Q8WU90 426 aaKnown RBP13.78□□□□□ -0.2
GGA3-211ENST00000582232 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
GGA3-211ENST00000582232 LSG1Q9H089 658 aaKnown RBP13.78□□□□□ -0.2
GGA3-211ENST00000582232 PGAP2Q9UHJ9 254 aa13.78□□□□□ -0.2
GGA3-211ENST00000582232 SLC4A4Q9Y6R1 1079 aa13.78□□□□□ -0.2
GGA3-211ENST00000582232 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
GGA3-211ENST00000582232 PRKAB2O43741 272 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 ENTPD3O75355 529 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 COL2A1P02458 1487 aaPredicted RBP13.77□□□□□ -0.21
GGA3-211ENST00000582232 MYH1P12882 1939 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 VEGFAP15692 232 aaPredicted RBP13.77□□□□□ -0.21
GGA3-211ENST00000582232 RBM26Q5T8P6 1007 aaKnown RBP13.77□□□□□ -0.21
GGA3-211ENST00000582232 VPS53Q5VIR6 699 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 FAM83AQ86UY5 434 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 PITPNM2Q9BZ72 1349 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 DCP1AQ9NPI6 582 aaPredicted RBP13.77□□□□□ -0.21
GGA3-211ENST00000582232 TMOD2Q9NZR1 351 aa13.77□□□□□ -0.21
GGA3-211ENST00000582232 POLR2AP24928 1970 aaKnown RBP13.76□□□□□ -0.21
GGA3-211ENST00000582232 BAZ2AQ9UIF9 1905 aaKnown RBP13.76□□□□□ -0.21
GGA3-211ENST00000582232 FLT1P17948 1338 aa13.76□□□□□ -0.21
GGA3-211ENST00000582232 PTH1RQ03431 593 aa13.76□□□□□ -0.21
GGA3-211ENST00000582232 IFNL3Q8IZI9 196 aa13.76□□□□□ -0.21
GGA3-211ENST00000582232 TGFBRAP1Q8WUH2 860 aa13.76□□□□□ -0.21
GGA3-211ENST00000582232 SDR42E1Q8WUS8 393 aa13.76□□□□□ -0.21
GGA3-211ENST00000582232 NACAP1Q9BZK3 213 aa13.76□□□□□ -0.21
GGA3-211ENST00000582232 EPB41L4AQ9HCS5 686 aaPredicted RBP13.76□□□□□ -0.21
GGA3-211ENST00000582232 ANO2Q9NQ90 1003 aa13.76□□□□□ -0.21
GGA3-211ENST00000582232 FAM198AQ9UFP1 575 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms