RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ZNF341Q9BYN7 854 aa16.13■□□□□ 0.17
SS18-219ENST00000581570 PUS3Q9BZE2 481 aaKnown RBP16.13■□□□□ 0.17
SS18-219ENST00000581570 MYPNQ86TC9 1320 aa16.13■□□□□ 0.17
SS18-219ENST00000581570 TRIOBPQ9H2D6 2365 aa16.12■□□□□ 0.17
SS18-219ENST00000581570 VAMP4O75379 141 aa16.12■□□□□ 0.17
SS18-219ENST00000581570 FKBP1CQ5VVH2 108 aa16.12■□□□□ 0.17
SS18-219ENST00000581570 MIGA2Q7L4E1 593 aa16.12■□□□□ 0.17
SS18-219ENST00000581570 ZDHHC15Q96MV8 337 aa16.12■□□□□ 0.17
SS18-219ENST00000581570 MRIQ9BWK5 157 aa16.12■□□□□ 0.17
SS18-219ENST00000581570 C9orf78Q9NZ63 289 aaPredicted RBP16.12■□□□□ 0.17
SS18-219ENST00000581570 IL16Q14005 1332 aa16.12■□□□□ 0.17
SS18-219ENST00000581570 ZSWIM8A7E2V4 1837 aa16.11■□□□□ 0.17
SS18-219ENST00000581570 ZBTB7BO15156 539 aaPredicted RBP16.11■□□□□ 0.17
SS18-219ENST00000581570 INPP5BP32019 993 aa16.11■□□□□ 0.17
SS18-219ENST00000581570 APOBEC3HQ6NTF7 200 aaKnown RBP16.11■□□□□ 0.17
SS18-219ENST00000581570 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
SS18-219ENST00000581570 SZT2Q5T011 3432 aa16.1■□□□□ 0.17
SS18-219ENST00000581570 FARP2O94887 1054 aaPredicted RBP16.1■□□□□ 0.17
SS18-219ENST00000581570 CAVIN4Q5BKX8 364 aa16.1■□□□□ 0.17
SS18-219ENST00000581570 U2AF1L4Q8WU68 220 aaKnown RBP16.1■□□□□ 0.17
SS18-219ENST00000581570 MROH5Q6ZUA9 1318 aa16.1■□□□□ 0.17
SS18-219ENST00000581570 ADGRA2Q96PE1 1338 aa16.1■□□□□ 0.17
SS18-219ENST00000581570 ARAP2Q8WZ64 1704 aa16.09■□□□□ 0.17
SS18-219ENST00000581570 PRKCZQ05513 592 aa16.09■□□□□ 0.17
SS18-219ENST00000581570 KCNH4Q9UQ05 1017 aa16.09■□□□□ 0.17
SS18-219ENST00000581570 A0A1W2PPC1 479 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 SGPL1O95470 568 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 FCGRTP55899 365 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 C1QBPQ07021 282 aaKnown RBP16.08■□□□□ 0.16
SS18-219ENST00000581570 HHIPL2Q6UWX4 724 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 SLAIN1Q8ND83 568 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 UNC93B1Q9H1C4 597 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 SUGT1Q9Y2Z0 365 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 MAST3O60307 1309 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 FANCIQ9NVI1 1328 aa16.08■□□□□ 0.16
SS18-219ENST00000581570 ALDH1L1O75891 902 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 BCRP11274 1271 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 BCAMP50895 628 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 EXOSC9Q06265 439 aaKnown RBP16.07■□□□□ 0.16
SS18-219ENST00000581570 MOGSQ13724 837 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 METTL24Q5JXM2 366 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 FAM151AQ8WW52 585 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 SUCLG2Q96I99 432 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 PARK7Q99497 189 aaKnown RBP16.07■□□□□ 0.16
SS18-219ENST00000581570 ZNF112Q9UJU3 913 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 GABRQQ9UN88 632 aa16.07■□□□□ 0.16
SS18-219ENST00000581570 RPAP1Q9BWH6 1393 aaPredicted RBP16.07■□□□□ 0.16
SS18-219ENST00000581570 CEP290O15078 2479 aa16.06■□□□□ 0.16
SS18-219ENST00000581570 SOX1O00570 391 aaPredicted RBP16.06■□□□□ 0.16
SS18-219ENST00000581570 EVI5O60447 810 aa16.06■□□□□ 0.16
SS18-219ENST00000581570 LRRC24Q50LG9 513 aa16.06■□□□□ 0.16
SS18-219ENST00000581570 SLC4A10Q6U841 1118 aa16.06■□□□□ 0.16
SS18-219ENST00000581570 KAZALD1Q96I82 304 aa16.06■□□□□ 0.16
SS18-219ENST00000581570 CXCL11O14625 94 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 ADCY3O60266 1144 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 PDE8BO95263 885 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 TFRCP02786 760 aaKnown RBP16.05■□□□□ 0.16
SS18-219ENST00000581570 CYP2C8P10632 490 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 TCP10Q12799 353 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 NOL9Q5SY16 702 aaKnown RBP16.05■□□□□ 0.16
SS18-219ENST00000581570 GPAT2Q6NUI2 795 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 LRCH3Q96II8 777 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 SRCIN1Q9C0H9 1055 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 STAP2Q9UGK3 403 aa16.05■□□□□ 0.16
SS18-219ENST00000581570 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
SS18-219ENST00000581570 CAPN2P17655 700 aa16.04■□□□□ 0.16
SS18-219ENST00000581570 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
SS18-219ENST00000581570 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
SS18-219ENST00000581570 FLT3LGP49771 235 aa16.03■□□□□ 0.16
SS18-219ENST00000581570 VGLL2Q8N8G2 317 aa16.03■□□□□ 0.16
SS18-219ENST00000581570 DEFB118Q96PH6 123 aa16.03■□□□□ 0.16
SS18-219ENST00000581570 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
SS18-219ENST00000581570 INHAP05111 366 aa16.02■□□□□ 0.16
SS18-219ENST00000581570 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
SS18-219ENST00000581570 ELNP15502 786 aa16.02■□□□□ 0.16
SS18-219ENST00000581570 CDC42EP5Q6NZY7 148 aa16.02■□□□□ 0.16
SS18-219ENST00000581570 FASTKD5Q7L8L6 764 aaKnown RBP16.02■□□□□ 0.16
SS18-219ENST00000581570 WDR63Q8IWG1 891 aa16.02■□□□□ 0.16
SS18-219ENST00000581570 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.16
SS18-219ENST00000581570 PXYLP1Q8TE99 480 aa16.02■□□□□ 0.16
SS18-219ENST00000581570 BICC1Q9H694 974 aaKnown RBP16.02■□□□□ 0.16
SS18-219ENST00000581570 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.16
SS18-219ENST00000581570 RANBP2P49792 3224 aaKnown RBP16.02■□□□□ 0.16
SS18-219ENST00000581570 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
SS18-219ENST00000581570 NFIAQ12857 509 aa16.01■□□□□ 0.15
SS18-219ENST00000581570 RABL6Q3YEC7 729 aaPredicted RBP16.01■□□□□ 0.15
SS18-219ENST00000581570 CCDC184Q52MB2 194 aa16.01■□□□□ 0.15
SS18-219ENST00000581570 DAGLAQ9Y4D2 1042 aa16.01■□□□□ 0.15
SS18-219ENST00000581570 ZHX2Q9Y6X8 837 aa16.01■□□□□ 0.15
SS18-219ENST00000581570 A0A0G2JLL6 359 aaPredicted RBP16■□□□□ 0.15
SS18-219ENST00000581570 TNPO2O14787 897 aaKnown RBP16■□□□□ 0.15
SS18-219ENST00000581570 MNX1P50219 401 aaPredicted RBP16■□□□□ 0.15
SS18-219ENST00000581570 IRF5Q13568 498 aa16■□□□□ 0.15
SS18-219ENST00000581570 GADL1Q6ZQY3 521 aa16■□□□□ 0.15
SS18-219ENST00000581570 PRRT2Q7Z6L0 340 aaPredicted RBP16■□□□□ 0.15
SS18-219ENST00000581570 PAWRQ96IZ0 340 aaKnown RBP16■□□□□ 0.15
SS18-219ENST00000581570 USP40Q9NVE5 1235 aa16■□□□□ 0.15
SS18-219ENST00000581570 FAM198AQ9UFP1 575 aa16■□□□□ 0.15
SS18-219ENST00000581570 UTYO14607 1347 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 KIF16BQ96L93 1317 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms