RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 CASP7P55210 303 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 POLA2Q14181 598 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 ARID5BQ14865 1188 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 PDIA6Q15084 440 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 CFAP100Q494V2 611 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 ZNF397Q8NF99 534 aaPredicted RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 CENPHQ9H3R5 247 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 RAI14Q9P0K7 980 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 CEP131Q9UPN4 1083 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 SLC27A2O14975 620 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 WDR46O15213 610 aaKnown RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 STX1AQ16623 288 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 CCDC144BQ3MJ40 725 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 TTLL5Q6EMB2 1281 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 CCDC144CPQ8IYA2 1237 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 CEP120Q8N960 986 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 SMC1BQ8NDV3 1235 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 VTI1AQ96AJ9 217 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 SYTL4Q96C24 671 aaPredicted RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 VCXQ9H320 206 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 MICALCLQ6ZW33 695 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 CCT6BQ92526 530 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 STMN2Q93045 179 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 DACT3Q96B18 629 aaPredicted RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 FUCA2Q9BTY2 467 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 GBP3Q9H0R5 595 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 GNL3LQ9NVN8 582 aaKnown RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 BABAM1Q9NWV8 329 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 MAP3K2Q9Y2U5 619 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 NPHP3Q7Z494 1330 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 USP27XA6NNY8 438 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 DAPK3O43293 454 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 JAK2O60674 1132 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 RBM5P52756 815 aaKnown RBP eCLIP4.83□□□□□ -1.64
RTTN-206ENST00000581161 CWF19L2Q2TBE0 894 aaKnown RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 TICAM2Q86XR7 235 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 AOPEPQ8N6M6 819 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 CUL5Q93034 780 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 TMX1Q9H3N1 280 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 ZNF215Q9UL58 517 aaPredicted RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 TCHHQ07283 1943 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 GSTTP1A0A1W2PQM5 241 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 SETDB1Q15047 1291 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 C11orf57Q6ZUT1 292 aaPredicted RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.83□□□□□ -1.64
RTTN-206ENST00000581161 ANKRD7Q92527 254 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 USP16Q9Y5T5 823 aa4.83□□□□□ -1.64
RTTN-206ENST00000581161 BTBD11A6QL63 1104 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 GOLIM4O00461 696 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 BIN1O00499 593 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 PPFIA2O75334 1257 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 NR1I2O75469 434 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 RNF8O76064 485 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 TMC6Q7Z403 805 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 CCDC50Q8IVM0 306 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 CACTINQ8WUQ7 758 aaKnown RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 ZNF396Q96N95 335 aaPredicted RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 UTP14AQ9BVJ6 771 aaKnown RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 PFDN4Q9NQP4 134 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 CCT2P78371 535 aaKnown RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 SNW1Q13573 536 aaKnown RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 STK38Q15208 465 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 CFAP58Q5T655 872 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 FAM177A1Q8N128 213 aaPredicted RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 FSIP1Q8NA03 581 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 KIF18AQ8NI77 898 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 TRIM63Q969Q1 353 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 ZSWIM6Q9HCJ5 1215 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 LRRC37AA6NMS7 1700 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 FLT4P35916 1363 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 DDX58O95786 925 aaKnown RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 RPS6KB1P23443 525 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 ACTN2P35609 894 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 ZNF530Q6P9A1 599 aaPredicted RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 MPRIPQ6WCQ1 1025 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 PATL1Q86TB9 770 aaKnown RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 CCDC148Q8NFR7 591 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 TDRD7Q8NHU6 1098 aaKnown RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 KLHDC4Q8TBB5 520 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 GTF3C6Q969F1 213 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 BEGAINQ9BUH8 593 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 TBC1D2BQ9UPU7 963 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 NDUFB9Q9Y6M9 179 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 FOXP2O15409 715 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 GABPB1Q06547 395 aaPredicted RBP4.82□□□□□ -1.64
RTTN-206ENST00000581161 Q6ZUG5 572 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 RIC3Q7Z5B4 369 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 ATP6V0A1Q93050 837 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 NEUROD6Q96NK8 337 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 MAP3K5Q99683 1374 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 A0A0D9SFI3 127 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 NEMFO60524 1076 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 ATP2B2Q01814 1243 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 MAP9Q49MG5 647 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 PALM2Q8IXS6 379 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 ABTB2Q8N961 1025 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 FTOQ9C0B1 505 aaKnown RBP eCLIP4.82□□□□□ -1.64
RTTN-206ENST00000581161 ANO10Q9NW15 660 aa4.82□□□□□ -1.64
RTTN-206ENST00000581161 FAM8A1Q9UBU6 413 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms