RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 ALDH1L1O75891 902 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 INHAP05111 366 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 CLDN10P78369 228 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 ATP8B2P98198 1209 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 ANKRD45Q5TZF3 282 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 PTF1AQ7RTS3 328 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 CHD1LQ86WJ1 897 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 LARGE2Q8N3Y3 721 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 CCDC82Q8N4S0 544 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 OGFOD1Q8N543 542 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 LINS1Q8NG48 757 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 RNF217Q8TC41 542 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 SYTL4Q96C24 671 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-213ENST00000580949 GCC1Q96CN9 775 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 ACSBG1Q96GR2 724 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 METTL22Q9BUU2 404 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-213ENST00000580949 VRTNQ9H8Y1 702 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
PTPRM-213ENST00000580949 NWD2Q9ULI1 1742 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 ERBB4Q15303 1308 aa7.77□□□□□ -1.17
PTPRM-213ENST00000580949 TMEM229AB2RXF0 380 aa7.76□□□□□ -1.17
PTPRM-213ENST00000580949 DDX58O95786 925 aaKnown RBP7.76□□□□□ -1.17
PTPRM-213ENST00000580949 STAU1O95793 577 aaKnown RBP7.76□□□□□ -1.17
PTPRM-213ENST00000580949 UBTFL1P0CB47 393 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-213ENST00000580949 CYP19A1P11511 503 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-213ENST00000580949 RASA1P20936 1047 aa7.76□□□□□ -1.17
PTPRM-213ENST00000580949 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.76□□□□□ -1.17
PTPRM-213ENST00000580949 MEX3CQ5U5Q3 659 aaKnown RBP7.76□□□□□ -1.17
PTPRM-213ENST00000580949 C16orf71Q8IYS4 520 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-213ENST00000580949 PLBD2Q8NHP8 589 aa7.76□□□□□ -1.17
PTPRM-213ENST00000580949 KAZALD1Q96I82 304 aa7.76□□□□□ -1.17
PTPRM-213ENST00000580949 LNPKQ9C0E8 428 aa7.76□□□□□ -1.17
PTPRM-213ENST00000580949 UTYO14607 1347 aa7.76□□□□□ -1.17
PTPRM-213ENST00000580949 PAPPAQ13219 1627 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 FIGNL2A6NMB9 653 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 SOBPA7XYQ1 873 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 NEURL1BA8MQ27 555 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 RFX1P22670 979 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 CENPCQ03188 943 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 C8orf34Q49A92 452 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 SIX5Q8N196 739 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 SSH3Q8TE77 659 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 JARID2Q92833 1246 aaPredicted RBP7.75□□□□□ -1.17
PTPRM-213ENST00000580949 MYD88Q99836 296 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 TEX13AQ9BXU3 409 aaPredicted RBP7.75□□□□□ -1.17
PTPRM-213ENST00000580949 GRIP2Q9C0E4 1043 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 KIAA1024Q9UPX6 916 aa7.75□□□□□ -1.17
PTPRM-213ENST00000580949 UBR2Q8IWV8 1755 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 FAM196BA6NMK8 535 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 GRM8O00222 908 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 SMARCA5O60264 1052 aaPredicted RBP7.74□□□□□ -1.17
PTPRM-213ENST00000580949 STARD3NLO95772 234 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 ITPK1Q13572 414 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 GCKRQ14397 625 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 EPHA10Q5JZY3 1008 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 SLC27A3Q5K4L6 730 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 FAM182BQ5T319 152 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 CCDC102BQ68D86 513 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 INTS5Q6P9B9 1019 aaKnown RBP7.74□□□□□ -1.17
PTPRM-213ENST00000580949 LYSMD3Q7Z3D4 306 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 PPP1R42Q7Z4L9 355 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 TPCN2Q8NHX9 752 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 OTUD7AQ8TE49 926 aaPredicted RBP7.74□□□□□ -1.17
PTPRM-213ENST00000580949 SUCLG2Q96I99 432 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 FHDC1Q9C0D6 1143 aaPredicted RBP7.74□□□□□ -1.17
PTPRM-213ENST00000580949 C9orf78Q9NZ63 289 aaPredicted RBP7.74□□□□□ -1.17
PTPRM-213ENST00000580949 ATRNO75882 1429 aa7.74□□□□□ -1.17
PTPRM-213ENST00000580949 CACNA1FO60840 1977 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 WNK3Q9BYP7 1800 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 IBTKQ9P2D0 1353 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-213ENST00000580949 BACH1O14867 736 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 HMMRO75330 724 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 CASP7P55210 303 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 PTK7Q13308 1070 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 MTX1Q13505 466 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 CRTC2Q53ET0 693 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-213ENST00000580949 QTRT2Q9H974 415 aaKnown RBP7.73□□□□□ -1.17
PTPRM-213ENST00000580949 ZNF358Q9NW07 568 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 TRPC5Q9UL62 973 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-213ENST00000580949 EXOC6BQ9Y2D4 811 aa7.73□□□□□ -1.17
PTPRM-213ENST00000580949 LOC102724428A0A0B4J2F2 783 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 SPATA31C2B4DYI2 1134 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L15C9J2P7 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L10C9JJH3 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L13C9JLJ4 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L12C9JPN9 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L11C9JVI0 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L21D6R901 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L18D6R9N7 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L22D6RA61 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L17D6RBQ6 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L19D6RCP7 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L20D6RJB6 530 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 H7C1W4 665 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 M0R2N6 131 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 SRGAP3O43295 1099 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 DKK1O94907 266 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 SMTNP53814 917 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 SIK1P57059 783 aa7.72□□□□□ -1.17
PTPRM-213ENST00000580949 USP17L24Q0WX57 530 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms