RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-218	ENST00000580745	SLURP2	P0DP57	97 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	INPP5B	P32019	993 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	MTX1	Q13505	466 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	FAM83A	Q86UY5	434 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	XAGE2	Q96GT9	111 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	USP40	Q9NVE5	1235 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	FAM198A	Q9UFP1	575 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	DENND2A	Q9ULE3	1009 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	TRIM17	Q9Y577	477 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	CSAD	Q9Y600	493 aa		13.81	□□□□□ -0.2
PPP4R1-218	ENST00000580745	CCL15-CCL14	A0A0B4J2E2	113 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	GNAI2	P04899	355 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	CCL15	Q16663	113 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	FKBP1C	Q5VVH2	108 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	DIEXF	Q68CQ4	756 aa	Known RBP	13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	PI16	Q6UXB8	463 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	FAM43A	Q8N2R8	423 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	CD99L2	Q8TCZ2	262 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	NEUROD6	Q96NK8	337 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	HDAC5	Q9UQL6	1122 aa		13.8	□□□□□ -0.2
PPP4R1-218	ENST00000580745	SPDYE5	A6NIY4	337 aa		13.79	□□□□□ -0.2
PPP4R1-218	ENST00000580745	PKN2	Q16513	984 aa	Known RBP	13.79	□□□□□ -0.2
PPP4R1-218	ENST00000580745	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP4R1-218	ENST00000580745	OTOP1	Q7RTM1	612 aa		13.79	□□□□□ -0.2
PPP4R1-218	ENST00000580745	FAM151A	Q8WW52	585 aa		13.79	□□□□□ -0.2
PPP4R1-218	ENST00000580745	C1orf115	Q9H7X2	142 aa		13.79	□□□□□ -0.2
PPP4R1-218	ENST00000580745	ABCF2	Q9UG63	623 aa		13.79	□□□□□ -0.2
PPP4R1-218	ENST00000580745	SALL1	Q9NSC2	1324 aa		13.79	□□□□□ -0.2
PPP4R1-218	ENST00000580745	IRF6	O14896	467 aa		13.78	□□□□□ -0.2
PPP4R1-218	ENST00000580745	SEMA3E	O15041	775 aa		13.78	□□□□□ -0.2
PPP4R1-218	ENST00000580745	GTF2A2	P52657	109 aa		13.78	□□□□□ -0.2
PPP4R1-218	ENST00000580745	ZKSCAN2	Q63HK3	967 aa		13.78	□□□□□ -0.2
PPP4R1-218	ENST00000580745	OTUD7B	Q6GQQ9	843 aa		13.78	□□□□□ -0.2
PPP4R1-218	ENST00000580745	TBC1D9	Q6ZT07	1266 aa		13.78	□□□□□ -0.2
PPP4R1-218	ENST00000580745	ZNF384	Q8TF68	577 aa		13.78	□□□□□ -0.2
PPP4R1-218	ENST00000580745	ZNF341	Q9BYN7	854 aa		13.78	□□□□□ -0.2
PPP4R1-218	ENST00000580745	ECM2	O94769	699 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP4R1-218	ENST00000580745	RLBP1	P12271	317 aa		13.77	□□□□□ -0.21
PPP4R1-218	ENST00000580745	TAF1C	Q15572	869 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP4R1-218	ENST00000580745	SH3BP5L	Q7L8J4	393 aa		13.77	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ERO1B	Q86YB8	467 aa		13.77	□□□□□ -0.21
PPP4R1-218	ENST00000580745	HMG20B	Q9P0W2	317 aa		13.77	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ARAP2	Q8WZ64	1704 aa		13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	GAK	O14976	1311 aa		13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	BTBD19	C9JJ37	291 aa		13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	RGS3	P49796	1198 aa		13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	SP3	Q02447	781 aa		13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	MVP	Q14764	893 aa	Known RBP	13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	DCAF15	Q66K64	600 aa		13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	DZIP1	Q86YF9	867 aa	Known RBP	13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	DDX4	Q9NQI0	724 aa	Known RBP	13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	AKAP2	Q9Y2D5	859 aa		13.76	□□□□□ -0.21
PPP4R1-218	ENST00000580745	WDHD1	O75717	1129 aa	Predicted RBP	13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	BTD	P43251	543 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	MECOM	Q03112	1051 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PPIL2	Q13356	520 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PICALM	Q13492	652 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	HOOK2	Q96ED9	719 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ERO1A	Q96HE7	468 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	EFCC1	Q9HA90	598 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ZFYVE28	Q9HCC9	887 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ZNF112	Q9UJU3	913 aa		13.75	□□□□□ -0.21
PPP4R1-218	ENST00000580745	AKAP11	Q9UKA4	1901 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ATRNL1	Q5VV63	1379 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	DDTL	A6NHG4	134 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	CETP	P11597	493 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	MCAM	P43121	646 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	SNAPC2	Q13487	334 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	POLA2	Q14181	598 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	GORAB	Q5T7V8	394 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ERICH6	Q7L0X2	663 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ITPRIP	Q8IWB1	547 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ZGPAT	Q8N5A5	531 aa	Known RBP	13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	SPATA5	Q8NB90	893 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ARHGAP39	Q9C0H5	1083 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	SNRK	Q9NRH2	765 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PTPN22	Q9Y2R2	807 aa		13.74	□□□□□ -0.21
PPP4R1-218	ENST00000580745	RFX7	Q2KHR2	1363 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	MROH7-TTC4	A0A0A0MT08	1334 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PDS5A	Q29RF7	1337 aa	Known RBP	13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ZBTB22	O15209	634 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	RHBDL3	P58872	404 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ATP8B2	P98198	1209 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PPAT	Q06203	517 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	CCDC84	Q86UT8	332 aa	Predicted RBP	13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	DBNDD2	Q9BQY9	259 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	IDI2	Q9BXS1	227 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ECM29	Q5VYK3	1845 aa		13.73	□□□□□ -0.21
PPP4R1-218	ENST00000580745	POTEF	A5A3E0	1075 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	FAM196B	A6NMK8	535 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PHF20L1	A8MW92	1017 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ZBTB7B	O15156	539 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ENTPD3	O75355	529 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	ARID4A	P29374	1257 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	MOGS	Q13724	837 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms